Basic Information

Gene Symbol
Arid4b
Assembly
GCA_003055125.1
Location
NDXZ01004451.1:5182-7758[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.1e-29 2.4e-25 89.1 0.1 1 88 296 381 296 382 0.95

Sequence Information

Coding Sequence
ATGCAGCAAGTGGATGATCCACCCTATCTCCAAGTGGGCACGGAAGTTAGTGCCAAATACAAGGGAGCCTTTTGTGAGGCAAAAGTCAGTGAAGTTGTACGCAATATAAAGGTAAAAGTTGCCTACAAACACGGTCTTGGCTCTGGCGTTGTTTCAGATGACGACATCAAAGCATCTCCAGGCCAATTAAGAGTCGGTGCTGTGGTCGAAGTTCGTCACGCAGATCGTAAAGAATATGCTGAGGCTACGGTTACCAAAATACAAGATTGCTCCCAATATACCGTGGTTTTCGATGATGGCGACATCACTACTTTGCGCCGTACCGCTTTATGCATTAAGAGTGGTCGTCATTTTAACGAGAGTGAGACTTTGGACCAGCTGCCTCTAACGCATCCCGAGCATTTTGGTAACCCAGTAGTGGGAGGGCGCCGCGGCCGACGTCGAGGTCAAATGAACGACGACAGCTCGGAAGATGATGATGAAAGTGATGCCAAGGAGGTGGTTAACGAAAAGGAGGAACATATTGGCAAAGTTGTTTGTGTTGAAACCGAAtcaaaaaagaaagataaagaGAAATGGTTTCCAGGCCTAGTGGTGGCTCCCACTGCTCAGGCTACTGTGCGTATACGTGTTAAAGATGAGTACTTGGTGCGTTCCTTTAAGGATGGTCGTTATTACACCGTCCCGAAGAAGGAGGCCACAGAGTTTACTCGCGAGGCAGCTGCTAAACAAGATGGCCCTGCTGTACAGGCTGCTTTGGAGTATCTAGATAGTGATGTTTTACCTCCTCATTGGGACCGAGACGCTTTGTTTGGACTTAGTAACTCTTCAAGTGAAAATGAGGACGAAATCGATTCGGATTCTTCAGATGATGAGCCCCGTGAGGAGAAAGATCGTTTTGTGGCTCAGCTCTATAAATATATGGATGATCGTGGCACACCACTTAACAAAGTTCCCTCTATACAAAACAAAGATGTAGATCTCTATCGCTTGTTTCGTGCAGTTCAAAAGAGAGGCGGTTACAATCGCGTCACATCCCAAAATCAATGGAAATCTATTGCATTGCGCTTGGGTTTTGCACCCGTCACCGTCAGCATTACCAATTTGGTAAAACAGGCATTTAAGAAATTTCTACAGCCTTATGGAGAATTCCATCGCAAATTGGGATGTTCCATGCTGATGTCGCCACGCAATTCAAATCGCACTAAAGGCCGCAGTTTAGTACGTGCCAATTCGGTAGCTTCTCCCAAGCCACAAGacgtaaataaagaaatttctaCACCCATTTCAAAATTAGCAACTACTTCGACAAGCAGTTTGACATTGGCAGTAGCTGCTACTGCTTCTACATCGGTAGCGGCCAACACATCCATTACTGAAGAATCAGAAAATACTAGTGAATCTAGTAGTCAAGAAACTGTGCAAAAGAATAAACGTAAATCTTCCATGGGTGGTACATCCTCAGCgtcgaataaagtaaaaaatatgataGAGAAATATGAGGAGAAAATTGGTAAAGATAAGGATGAAGGCGATGTTcctttatcaaaaataaaagcagcgGCAGCTAACAAAGAACGCGAAAAGGAAGATGCCAAAGAGAAAGAACGTGAAAAAGAACGCGAGAGGGAGCGCGAAAAAGAGAAGGAACGTGATAAAGAACGGGAACGAGAAAAAGAGAAGGAAAAAGAGAAAGAACGTGAGAGGGAAAaggaaaaagagaaagaaaaagaaaaggaaaaagaacgcgaaaaggaaaaagaaaaggaaCGTGAAAGGGAAAaagacaaagaaaaagaaagtgGCGGCTCCAAGGATTCCTCAGGACAATATCTGTCTCCGCCTCGTCTGCATTATTGA
Protein Sequence
MQQVDDPPYLQVGTEVSAKYKGAFCEAKVSEVVRNIKVKVAYKHGLGSGVVSDDDIKASPGQLRVGAVVEVRHADRKEYAEATVTKIQDCSQYTVVFDDGDITTLRRTALCIKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQMNDDSSEDDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPGLVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTREAAAKQDGPAVQAALEYLDSDVLPPHWDRDALFGLSNSSSENEDEIDSDSSDDEPREEKDRFVAQLYKYMDDRGTPLNKVPSIQNKDVDLYRLFRAVQKRGGYNRVTSQNQWKSIALRLGFAPVTVSITNLVKQAFKKFLQPYGEFHRKLGCSMLMSPRNSNRTKGRSLVRANSVASPKPQDVNKEISTPISKLATTSTSSLTLAVAATASTSVAANTSITEESENTSESSSQETVQKNKRKSSMGGTSSASNKVKNMIEKYEEKIGKDKDEGDVPLSKIKAAAANKEREKEDAKEKEREKEREREREKEKERDKEREREKEKEKEKEREREKEKEKEKEKEKEREKEKEKEREREKDKEKESGGSKDSSGQYLSPPRLHY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00655114;
90% Identity
iTF_01259005;
80% Identity
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