Prec032760.1
Basic Information
- Insect
- Pasiphila rectangulata
- Gene Symbol
- nfxl1
- Assembly
- GCA_963082625.1
- Location
- OY720259.1:13928546-13931017[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 4e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.014 2.9e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 20 3.1e-07 0.0063 17.7 15.9 3 19 186 202 185 202 0.95 4 20 0.19 3.8e+03 -0.8 2.5 1 8 227 233 227 234 0.88 5 20 1.4e-07 0.0029 18.7 12.9 3 19 239 255 237 255 0.91 6 20 0.33 6.7e+03 -1.6 1.1 8 13 260 265 259 266 0.81 7 20 1.1 2.2e+04 -3.2 0.9 6 10 280 284 279 284 0.86 8 20 8.7e-10 1.8e-05 25.8 12.4 1 19 290 308 290 308 0.99 9 20 1.2e-05 0.24 12.6 19.4 3 19 345 361 337 361 0.86 10 20 2 4e+04 -5.3 2.2 5 10 384 389 384 389 0.88 11 20 5.9e-06 0.12 13.6 18.3 1 18 395 412 395 413 0.97 12 20 2.3e-08 0.00047 21.2 16.9 1 19 422 440 422 440 0.99 13 20 0.0002 4.1 8.6 6.4 9 19 488 498 486 498 0.89 14 20 0.0003 6 8.1 7.6 1 12 508 518 508 518 0.96 15 20 0.35 7.1e+03 -1.7 3.3 14 18 547 551 547 552 0.85 16 20 0.22 4.4e+03 -1.0 0.3 8 12 568 572 567 579 0.79 17 20 5.8e-06 0.12 13.6 6.5 1 11 588 598 588 599 0.98 18 20 0.43 8.7e+03 -2.0 1.4 14 18 612 616 612 617 0.85 19 20 0.00012 2.4 9.4 11.9 1 18 628 645 628 646 0.88 20 20 1.4e-06 0.028 15.6 13.5 1 16 687 701 687 706 0.86
Sequence Information
- Coding Sequence
- ATGGCGCGCCGCTACAAAGACGCAGCCGCTAAACTGCAGCAGAACGTGCAAAAACATCTGAAAGATATGAAGGACCTCTCGTCTTCGGAGGACGAGGAGCCCTACGAGGCCAGCGTGATCGAGGGCATGTTTCAGAGCtaccggcgcggcggcggcgacgcgcAGCTGCTCAACCGGACCAGGAACCTGCTGGAAGAGGCCGTCAGCGGCCGCGCCGTGGCCTGCCTCATCTGCATCAGCTCCGTCAAGCGCAGCCATGCCATCTGGGCGTGCGACCACTGCTACTCCTACTTCCACTTCTCGTGCATTCAGAAATGGGCTAACGACAGCATCAGTCTGCGCAGTATCGAGCCGCAGGCGCCGATAAGCGTCTACAAGCCGCAGAAAATTGAATGGTGCTGTCCAAAGTGCCGTAACTCTTACACCAAGGACGAAATACCTCGCAAGTACAGGTGTTTCTGTAACAAAACTGACAACCCTCCCGTGCACGCCTGGCTGCTCCCGCACACCTGTGGGGAGGTCTGCGAGAAGAGGCTCTCCACAGGAGACAACTGCAAGCACAAGTGTCTGCTTCTCTGCCACCCCGGTCCGTGCCCACCGTGTCCTCAAACTGTCAATGGAATATGCTACTGTGAAAAGGAACGCAAAAAAGTCAGATGCAGTACAGCAAAATGGTCATGTGGACATCCATGTAAGAAAACTTTGCTTTGCCAGGCACACCAATGTCAGCTCATCTGTCATGAGGGAGACTGTCCACCATGCACCTACACCAGTCTCCAACCTTGCCATTGTGGAGCCGAGCGCATCAAGAGACCCTGTGATGATCCCTTCTGGCACTGCAAAAAACCTTGCAATAAACCATACTCATGTGGCTACCATAAATGTGAGGAAGTTTGCCATTCCGGTAGCTGTGAGGAATGTCCTAACTCTGGAATGAGGTCCTGTCCCTGTGGAGCCAACCAGCGATATGTGCAGTGCCCTGACATCATGGAGACTTGCCTCGGAACTTGTGGGAAGAGACATGAAGGGTGTGAACATAGCTGTCCTGAAAAATGCCACAAAGGAGCTTGCCCACCATGCCAAGTCCTGATCCAAAAGAAGTGTCTCTGCAGCACTCACACCAGGTCTCTACCATGCAGCAAGGAGTTTAAATGTGAGACAAAATGCAGGGGAACTAGACCCTGTGGGAAACATGGATGTGCCAGGAAATGCTGCAATGGTAATTGCCCTCCTTGTGAAAAGGCATGTGACAAGCCCCTGCAGTGCGGCCGCCACAAGTGCACCACTATCTGCCACCACGGACCCTGTTACCCCTGTCCGCTGGAATCCAAAATATACTGTAAATGTAAAGAAACCTATGTGACTGTGCCATGTGGGAGAGAACGCTTTACAAAACCTCCAAAATGTAGCCTTCCATGTAAAGTGAAGTACAAATGTGGTCATCAGGAAGAAAATAAGCATTCCTGCCATTTTGGAGACTGCCCACCATGCAAAGCAATCTGCTACAAAACATACCCAAAATGTGGTCACAAGTGCAAGGCCACCTGCCATGATTATAAAGCTGTAGTGTTCAAGCAGATCGAGAAGCCTGCCACTCCTTGGGAAGTGCAACCACCCAAGACTAAGATCATGACCTTGGAGTGTCCACCGTGCAATATGCCTGTGTCTGTCATCTGCTTCGGGGAACATGAGACTGACAACCAGCCCTGCCACACAGCTGCGAGGCGGCCCTGCGGCAGAGAGTGTGGGAAACCATTGGCCTGTGGAAACCACAACTGTACGCAACTTTGTCACCTGTACACCCCTGATATTGAATATCCTAACATTCCCTCTAACTGTAAGCCTTGCAACAAAGAATGTGTAAAACTACGTCCTGAGAAATGCTCCCACAAGTGTTCCATCAAGGCGTGCCACCCAGGGGCTTGTCGTCCCTGTGAAATGCTGGAGCGAGTGCCGTGCCACTGCGCTGTCACAGAATTGTATCTCAAGTGCCGGGAGTACTGCACTGCAACAGAAGAAATGTTGTCGTGCAAACAGCAGTGCCCAAAGAACTTGGAGTGTGGGCACCGCTGCAAGAATACCTGCCATCCAGGTCCCTGCACTAACCAAGTGTGCaccaagaaaacaaaaatacactGCCCATGTGGCAACTTAAGGAAAGAAGCTCCTTGCAATGCAGTCAAAAGTGGTGCTACAAAAGTTATCTGTGAAGAAAGCTGCGAAGTCAAGAAAGCTACTGCTAAGCTAGAGACAGAGAAAGAACAACAGAGGTTAAAGCAGCTACAAGAGGAGAGGAATAAGAAAGAGATGGCTGAGTATGAGTGGAAACTAAGCGggaaaaagaagaagtacaAGGAAAAGAAGGTTTTGATGGACAGAGACGAGAGGAGCTGGGCACACCGATACTGGATGCCAATCTCAGGGGTTGTGATTGTGATTGTTGCAGctatttactatagttattatATTTAG
- Protein Sequence
- MARRYKDAAAKLQQNVQKHLKDMKDLSSSEDEEPYEASVIEGMFQSYRRGGGDAQLLNRTRNLLEEAVSGRAVACLICISSVKRSHAIWACDHCYSYFHFSCIQKWANDSISLRSIEPQAPISVYKPQKIEWCCPKCRNSYTKDEIPRKYRCFCNKTDNPPVHAWLLPHTCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICYCEKERKKVRCSTAKWSCGHPCKKTLLCQAHQCQLICHEGDCPPCTYTSLQPCHCGAERIKRPCDDPFWHCKKPCNKPYSCGYHKCEEVCHSGSCEECPNSGMRSCPCGANQRYVQCPDIMETCLGTCGKRHEGCEHSCPEKCHKGACPPCQVLIQKKCLCSTHTRSLPCSKEFKCETKCRGTRPCGKHGCARKCCNGNCPPCEKACDKPLQCGRHKCTTICHHGPCYPCPLESKIYCKCKETYVTVPCGRERFTKPPKCSLPCKVKYKCGHQEENKHSCHFGDCPPCKAICYKTYPKCGHKCKATCHDYKAVVFKQIEKPATPWEVQPPKTKIMTLECPPCNMPVSVICFGEHETDNQPCHTAARRPCGRECGKPLACGNHNCTQLCHLYTPDIEYPNIPSNCKPCNKECVKLRPEKCSHKCSIKACHPGACRPCEMLERVPCHCAVTELYLKCREYCTATEEMLSCKQQCPKNLECGHRCKNTCHPGPCTNQVCTKKTKIHCPCGNLRKEAPCNAVKSGATKVICEESCEVKKATAKLETEKEQQRLKQLQEERNKKEMAEYEWKLSGKKKKYKEKKVLMDRDERSWAHRYWMPISGVVIVIVAAIYYSYYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857272;
- 90% Identity
- -
- 80% Identity
- -