Basic Information

Insect: Pasiphila rectangulata
Gene Symbol: -
Assembly: GCA_963082625.1
Location: OY720235.1:31108227-31149743[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.3 1.3e+02 4.4 0.1 3 16 232 245 231 247 0.89

2 15 0.46 49 5.8 0.1 2 23 397 418 396 418 0.92

3 15 0.5 53 5.7 1.0 2 21 596 615 595 616 0.93

4 15 0.055 5.8 8.7 4.3 2 23 650 671 649 671 0.95

5 15 2 2.1e+02 3.8 3.4 1 23 682 705 682 705 0.91

6 15 0.00092 0.097 14.3 0.2 2 23 712 735 711 735 0.92

7 15 0.071 7.5 8.3 0.2 1 23 741 763 741 763 0.93

8 15 0.0089 0.94 11.2 1.8 1 23 769 791 769 791 0.98

9 15 1.6 1.7e+02 4.1 0.0 2 19 802 819 802 822 0.87

10 15 0.36 38 6.1 0.1 1 23 905 927 905 927 0.96

11 15 2.1 2.2e+02 3.7 7.2 1 23 934 956 934 956 0.95

12 15 0.0014 0.15 13.7 1.8 1 23 983 1006 983 1006 0.95

13 15 0.0032 0.34 12.6 1.8 1 23 1013 1036 1013 1036 0.96

14 15 0.0062 0.66 11.7 0.1 2 23 1054 1076 1053 1076 0.96

15 15 0.00085 0.09 14.4 0.5 3 23 1118 1139 1116 1139 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.3	1.3e+02	4.4	0.1	3	16	232	245	231	247	0.89
2	15	0.46	49	5.8	0.1	2	23	397	418	396	418	0.92
3	15	0.5	53	5.7	1.0	2	21	596	615	595	616	0.93
4	15	0.055	5.8	8.7	4.3	2	23	650	671	649	671	0.95
5	15	2	2.1e+02	3.8	3.4	1	23	682	705	682	705	0.91
6	15	0.00092	0.097	14.3	0.2	2	23	712	735	711	735	0.92
7	15	0.071	7.5	8.3	0.2	1	23	741	763	741	763	0.93
8	15	0.0089	0.94	11.2	1.8	1	23	769	791	769	791	0.98
9	15	1.6	1.7e+02	4.1	0.0	2	19	802	819	802	822	0.87
10	15	0.36	38	6.1	0.1	1	23	905	927	905	927	0.96
11	15	2.1	2.2e+02	3.7	7.2	1	23	934	956	934	956	0.95
12	15	0.0014	0.15	13.7	1.8	1	23	983	1006	983	1006	0.95
13	15	0.0032	0.34	12.6	1.8	1	23	1013	1036	1013	1036	0.96
14	15	0.0062	0.66	11.7	0.1	2	23	1054	1076	1053	1076	0.96
15	15	0.00085	0.09	14.4	0.5	3	23	1118	1139	1116	1139	0.94

Sequence Information

Coding Sequence: ATGAACGAAAACGTCTACCAATTCCTTGTGAACTTGGAACTAAATGACCCAGAAATGGTACAGAGTTACGGTCCAATCGACACTAACAACCAACCAGTAGAGTTAGACGATAACCAACTTTACGTACTAGACGATGGAACACAGATAAGAGCTTCCCAAATACACTTTGACAATGAAGATGCTCCTTTAGATTTATCGCTCGAGCAACTCCCTTTTGTCCAAATTAATGAAGATGAGGTTACTAATAATAATCTAGGAGATTTAACATTCGAAGATGTTGCACACAAAATTGCAGCAAGCCCGGTCCCTATAACTGATACTAGCCCAAGACATGGTTTTATAAACCACGTACCTTTCAAACTAGTATGTAACAACACAACAGGTTTTGAAGCCCAATTTACTAAATACCTAGAAGCGAGTAACAAAACGTATGCAACACTAAGCGATGTTACCAAAAAGAACAAATCTCCAAGGAGTTTGATAAGAGACAACTTTAACGATAAAGAAGAGTTTAGATACACGCGTGAAGAGATACTCAATATGCTTAAAGATGCACCAGTTACGAGTGTACCTTACGAGAATAATGAGAGAAAACATGTGAGAAAGACTGATCCCACGAAAATGGCCCATAAGACTAACACAAAATCTATAGATATAGAAGGGCTAGTAATAGGCGACGGAGGGAGTAGAATTTGCTTTATATGTGGCAAAAACGTCAGTAATAAAGTATACCTCTTCGACAAAGAAGACCAAAAGATACACAAATGTTCTCCGCAAAAGAAAATGTCTACTCAACTAAAAGTGATATGCGAATGCTGCCTAAGCGATAACTTCAGACCGTCAAGAATGAAAAGCGCCAACCAATTTCTAAATTCCGACGAGTATCTGGTGATAAGGAATAACCAGCAATACATATTTCAGAAGACGAGGAACTTTAGATTTCGGACGGATACTATGAGcaacaaaataaagaataaGAAGGATGAATTCGTTAAGTTTGATATAGGTTCTGATGGGGAGATCGTCACTAAGCCGGTGGATGATGACGTCATCCTAGATAGGAAGGACAGCTCCAGTGACGTAGAGATTATAGAGGACGTTGACAAGATCATTGACAACTTGGAGGAAGCGGATGAGGATGTCAAAGTATTCTTGGGGAAATACGAATGCGATGCAGTCGATGAGTTGAAATGCAGATTCTGCGAGCGGGTATTCTCTGCTGTATCAGAAGTGATACAGCACGGCGCAATGCACAAACACGAAACCGAAGACGACACCGTGTTTCCTTGTCCGCTGTGTGATTATGGTGGCGAGAATGTAACTGGCGAAGCGGAGAACTTGGAATCAATTAAGTCAaACATCCACGAGCTAACCATCAAGACGGAAGTAAAGCAAGAGGCGATAAGCAGTGACGATGAGATTTGGATAGTGCAGACTGGCGACGACGAGTCCACGGGACCTTTGAAGGACATTCTAGAAGCTGCCAAGGTATACGATTATGGGTTCCTGTTGCTTTGGGGAGTGAAACAAGAGGCGATAAGCAGTGACGATGAGATCTGGATAGGGCAGACAGGCGACGATGAGTCCACGAGGCCTTTGAAGGACATTCTAGAAGCTGCCAAGGTATACGATTATGGGTTCCTGTTGCTTTTGGGAGTGAAACAAGAGGCGATAAGCAGTGAAGATGAGATCTGGATAGTGCAGACAGGCGACGATGAGTCCACGAGGCCTTTGAAGGACATTCTAGAAGCTGCCAAGGTTGATACTGGTGACAGTGAAATAAAGAAATGCGATTCTTGCGGCAATACCTATCCGTCGCTCGAATCGCTCGCTTCACACAAATGCCGCGAGACGCAACTTAAAACAGACGAAGACATGCTTATACCGGAAGAAGAATTTAATTGGACATCCAAAAAACTCAAAGATCCTTCGGAGACACAGATCGTGACGTGCCACAACTGCAACCAATCGTTCACATCTAAAGTGCGCCTCAAGTTTCACATGCAATTTCACGAGAGCACGGCAATGCTCGCGGACGGGCAGTACAAGTGCACGCAATGCGACTCGCTGTTCTCGAGCGAGACGCGCCTGTTCGACCACGTGCACTTCAGGCACGAGAAGACGCGGCGCTGGCAGTGCGCCGTGGAGGGCTGCGGGAAGACCTTCTATCTCAGgGCGACACTGACGAAACATAGCCGCATCCACACTGACACCCGCCGCTACGTGTGCGTAACGTGTGGCAAACGGTTCCTGGACAAACAGACGCTGGACGAGCATGGAGTGACGCACCTTCAGATAAAGCCGTACCAGTGCCACATCTGCCTGAAGCAGCTGACGCGCGTGTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTCGCGCCCGCGCTCGTGCCCGTCTGCCGGGGCTGCCGCCGCGCCTTCCGGGACGCGCAGGAGGCAGAGGAGCACGCAACCAAATCCACGGAATGCATCAAAGCGATCGCCGGGGAAGTTAAGACCGAACAAGAAACAGCGTACCATTTGTCACCCACCAGTGGCATTGTACGGGAGACGGTGCAAGTCGTTGCCATGACATCTGACCTTCCAGAGTGCCCCAAAACGCGCGTGCCTCGACAAGTGGCCTCGCCCGTGGCGGCCCCGCTGCTCTCGGCGCTGTCCGGCGCGGCGTCAGCGCTTATACGAGTGGTCGAGATTGAGAAAGCTTTCCGCTGTGAATATTGTGAAGATGTGTTCTACATAGAAGAAGGGCTGAACGACCACAGGGCGATACACAAGGGCGTTAAGAATCCCTTCACGTGTCACATATGCAAAGTCAGCTTTGCTACTTATTCcagATGCACAACGCACAAGACTACACACGGCTTCTACAAGCGGCCGGCCGGCAGCGACCAGGTCGCTGGGGTGGTGGGCTATGGAGACTTCCCCACCGTCAAACACTTCTTGTGCGAGGACTGCGGCAGATCCTACCTACACTGGACGTACCTACAAGTTCATAGAAGGATGAAGCACCCAAATGAAAACTACCCGCACAATTGTAATCAGTGCGAGATGACGTTCCCTAACAGTTGGAGTCTGGCCTACCACAGAAAGAAACTTCACAGTAAACCTGCCCAAGAGGAAACTGCAAAAGCAAACGTGAATTACAGGATACCTTGCCGCGACTGCGAGGAGGTGTTGCCAAACAAAACTGCGCTCTACAAGCACAGGAGGAAGGAGCACACTGGTGTGTCTCTCAGCGCGAATACAAGCGCCGCCGCCGGCTCCGCCTGCAGTCAGGCGGACGGAGCGCCCTCTACCGCGATGCGCAACAAACTATTACAATGCGGCGTCCGCGCGTGGGCGTGCGCGCGCTGCCCGAAACGTTTCCGCATCCGGTCCGAGCTGCGCGCGCACACTAGGCTCAAGCACCCGGCTTTCATCGCCATTCTGGAGGTGAAAGGTCGTAACCTGTGCGCCGAGGAAGCCGTCAGCATCATCAGCTCCAGCAACATAAGCCAGGACAAGATCATTGAGATCAATGCCATGTACTTCGCCAAGGGCTCCTCCAGCGTGGTCCCGAActgcgcgcgcgcgctcgccgcgcTGGGCCGCGCGCCGCGCACGCTGCtccgggcgccgcgcgcgcagcaCGGCGTGCTGAGTGCTTCAGCaccatcatctcggccgtaa
Protein Sequence: MNENVYQFLVNLELNDPEMVQSYGPIDTNNQPVELDDNQLYVLDDGTQIRASQIHFDNEDAPLDLSLEQLPFVQINEDEVTNNNLGDLTFEDVAHKIAASPVPITDTSPRHGFINHVPFKLVCNNTTGFEAQFTKYLEASNKTYATLSDVTKKNKSPRSLIRDNFNDKEEFRYTREEILNMLKDAPVTSVPYENNERKHVRKTDPTKMAHKTNTKSIDIEGLVIGDGGSRICFICGKNVSNKVYLFDKEDQKIHKCSPQKKMSTQLKVICECCLSDNFRPSRMKSANQFLNSDEYLVIRNNQQYIFQKTRNFRFRTDTMSNKIKNKKDEFVKFDIGSDGEIVTKPVDDDVILDRKDSSSDVEIIEDVDKIIDNLEEADEDVKVFLGKYECDAVDELKCRFCERVFSAVSEVIQHGAMHKHETEDDTVFPCPLCDYGGENVTGEAENLESIKSNIHELTIKTEVKQEAISSDDEIWIVQTGDDESTGPLKDILEAAKVYDYGFLLLWGVKQEAISSDDEIWIGQTGDDESTRPLKDILEAAKVYDYGFLLLLGVKQEAISSEDEIWIVQTGDDESTRPLKDILEAAKVDTGDSEIKKCDSCGNTYPSLESLASHKCRETQLKTDEDMLIPEEEFNWTSKKLKDPSETQIVTCHNCNQSFTSKVRLKFHMQFHESTAMLADGQYKCTQCDSLFSSETRLFDHVHFRHEKTRRWQCAVEGCGKTFYLRATLTKHSRIHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPYQCHICLKQLTRVSRLRMHVRAHEEELAPALVPVCRGCRRAFRDAQEAEEHATKSTECIKAIAGEVKTEQETAYHLSPTSGIVRETVQVVAMTSDLPECPKTRVPRQVASPVAAPLLSALSGAASALIRVVEIEKAFRCEYCEDVFYIEEGLNDHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPAGSDQVAGVVGYGDFPTVKHFLCEDCGRSYLHWTYLQVHRRMKHPNENYPHNCNQCEMTFPNSWSLAYHRKKLHSKPAQEETAKANVNYRIPCRDCEEVLPNKTALYKHRRKEHTGVSLSANTSAAAGSACSQADGAPSTAMRNKLLQCGVRAWACARCPKRFRIRSELRAHTRLKHPAFIAILEVKGRNLCAEEAVSIISSSNISQDKIIEINAMYFAKGSSSVVPNCARALAALGRAPRTLLRAPRAQHGVLSASAPSSRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -