Basic Information

Insect: Pasiphila rectangulata
Gene Symbol: zfh1
Assembly: GCA_963082625.1
Location: OY720264.1:8983366-8990196[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 35 0.00031 0.033 15.8 0.9 2 21 159 178 158 179 0.94

2 35 0.14 14 7.5 1.4 2 21 266 285 266 286 0.92

3 35 0.0021 0.22 13.1 2.2 2 23 324 346 323 346 0.95

4 35 0.18 19 7.1 0.6 3 23 354 373 353 373 0.95

5 35 0.0031 0.33 12.6 1.2 1 23 378 400 378 400 0.98

6 35 0.01 1.1 11.0 2.2 1 23 406 429 406 429 0.95

7 35 0.054 5.7 8.7 0.1 2 23 439 461 439 461 0.96

8 35 1.5 1.6e+02 4.2 0.4 1 10 471 480 471 482 0.92

9 35 0.36 38 6.1 0.2 1 20 591 610 591 612 0.92

10 35 3.7 3.9e+02 2.9 3.4 1 23 642 664 642 664 0.96

11 35 2.1 2.2e+02 3.7 0.6 3 23 670 691 669 691 0.92

12 35 0.62 65 5.4 3.7 2 21 695 714 694 715 0.92

13 35 5.6e-05 0.0059 18.1 0.9 1 23 724 747 724 747 0.94

14 35 3.8e-06 0.00041 21.8 2.5 1 23 753 775 753 775 0.98

15 35 0.00078 0.082 14.5 0.3 1 23 782 806 782 806 0.97

16 35 1.5 1.5e+02 4.2 0.1 1 12 819 830 819 832 0.89

17 35 7.1e-05 0.0075 17.8 0.2 2 22 924 944 923 944 0.95

18 35 8.5 9e+02 1.8 0.1 12 23 957 969 955 969 0.90

19 35 5.7 6e+02 2.4 5.6 1 23 974 997 974 997 0.97

20 35 0.01 1.1 11.0 0.6 1 23 1002 1024 1002 1024 0.97

21 35 4.3 4.6e+02 2.7 3.7 5 20 1030 1045 1028 1047 0.92

22 35 7.9e-05 0.0084 17.6 0.3 1 23 1059 1082 1059 1082 0.95

23 35 6.5e-05 0.0069 17.9 2.3 1 23 1088 1110 1088 1110 0.97

24 35 0.0027 0.28 12.8 0.9 1 23 1144 1167 1144 1167 0.98

25 35 0.0031 0.33 12.6 0.4 3 23 1177 1198 1176 1198 0.97

26 35 0.00058 0.061 14.9 0.2 2 20 1308 1326 1307 1328 0.94

27 35 0.23 24 6.8 0.0 3 23 1335 1356 1333 1356 0.96

28 35 0.012 1.3 10.8 0.0 1 23 1361 1384 1361 1384 0.93

29 35 0.0015 0.16 13.6 0.4 3 23 1391 1411 1389 1411 0.95

30 35 0.14 15 7.4 1.6 2 20 1415 1433 1414 1435 0.92

31 35 2.4e-05 0.0025 19.3 0.4 1 23 1459 1482 1459 1482 0.95

32 35 0.0013 0.13 13.9 1.3 1 23 1488 1510 1488 1510 0.93

33 35 0.011 1.2 10.9 0.1 1 23 1516 1538 1516 1538 0.98

34 35 0.0075 0.8 11.4 0.3 1 23 1544 1567 1544 1567 0.94

35 35 0.00059 0.062 14.9 0.6 1 23 1573 1596 1573 1596 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	35	0.00031	0.033	15.8	0.9	2	21	159	178	158	179	0.94
2	35	0.14	14	7.5	1.4	2	21	266	285	266	286	0.92
3	35	0.0021	0.22	13.1	2.2	2	23	324	346	323	346	0.95
4	35	0.18	19	7.1	0.6	3	23	354	373	353	373	0.95
5	35	0.0031	0.33	12.6	1.2	1	23	378	400	378	400	0.98
6	35	0.01	1.1	11.0	2.2	1	23	406	429	406	429	0.95
7	35	0.054	5.7	8.7	0.1	2	23	439	461	439	461	0.96
8	35	1.5	1.6e+02	4.2	0.4	1	10	471	480	471	482	0.92
9	35	0.36	38	6.1	0.2	1	20	591	610	591	612	0.92
10	35	3.7	3.9e+02	2.9	3.4	1	23	642	664	642	664	0.96
11	35	2.1	2.2e+02	3.7	0.6	3	23	670	691	669	691	0.92
12	35	0.62	65	5.4	3.7	2	21	695	714	694	715	0.92
13	35	5.6e-05	0.0059	18.1	0.9	1	23	724	747	724	747	0.94
14	35	3.8e-06	0.00041	21.8	2.5	1	23	753	775	753	775	0.98
15	35	0.00078	0.082	14.5	0.3	1	23	782	806	782	806	0.97
16	35	1.5	1.5e+02	4.2	0.1	1	12	819	830	819	832	0.89
17	35	7.1e-05	0.0075	17.8	0.2	2	22	924	944	923	944	0.95
18	35	8.5	9e+02	1.8	0.1	12	23	957	969	955	969	0.90
19	35	5.7	6e+02	2.4	5.6	1	23	974	997	974	997	0.97
20	35	0.01	1.1	11.0	0.6	1	23	1002	1024	1002	1024	0.97
21	35	4.3	4.6e+02	2.7	3.7	5	20	1030	1045	1028	1047	0.92
22	35	7.9e-05	0.0084	17.6	0.3	1	23	1059	1082	1059	1082	0.95
23	35	6.5e-05	0.0069	17.9	2.3	1	23	1088	1110	1088	1110	0.97
24	35	0.0027	0.28	12.8	0.9	1	23	1144	1167	1144	1167	0.98
25	35	0.0031	0.33	12.6	0.4	3	23	1177	1198	1176	1198	0.97
26	35	0.00058	0.061	14.9	0.2	2	20	1308	1326	1307	1328	0.94
27	35	0.23	24	6.8	0.0	3	23	1335	1356	1333	1356	0.96
28	35	0.012	1.3	10.8	0.0	1	23	1361	1384	1361	1384	0.93
29	35	0.0015	0.16	13.6	0.4	3	23	1391	1411	1389	1411	0.95
30	35	0.14	15	7.4	1.6	2	20	1415	1433	1414	1435	0.92
31	35	2.4e-05	0.0025	19.3	0.4	1	23	1459	1482	1459	1482	0.95
32	35	0.0013	0.13	13.9	1.3	1	23	1488	1510	1488	1510	0.93
33	35	0.011	1.2	10.9	0.1	1	23	1516	1538	1516	1538	0.98
34	35	0.0075	0.8	11.4	0.3	1	23	1544	1567	1544	1567	0.94
35	35	0.00059	0.062	14.9	0.6	1	23	1573	1596	1573	1596	0.94

Sequence Information

Coding Sequence: ATGAGTCGTCAAGTGGACGTGAAAGCTTTGATATCACATATCGTAAAAGGCGATGGCTTAGACAAATGCAGGATATGCATGGGAGATACTTCACAAGGCCAAGTCCACCTCACTGACACCGTAATGATGGACGGAGACAAAGCCGTAACGCTATCAGAACTGCTTGAAATCATAACAGGAGTCGAGGTGGAGTTTGAAGAAGTGCTACCATCCTCCTTATGCCTTACCTGCTCTGTAGCTGCATTTGAGGCAGCTGAGTTCAAGAACCTGGCCCAAAGAGCCAATCGGCAGTGGAACAATGTATTTGACCTCCTAGACCATGTTCCCGAACACAAATTTGCCAAAACAAGTAGTAAGATTGTAGCAGTTATCACCAATAACTGTATAAATATAAGTGATGAATGCACTAAACCACCTGTGGAGAAACCCAAAGACAGACCAATGCAGAAACGTCCCGGGAAACAACAAGATTGCCAATGCCAAACTTGCGGAAAGAAATTTCCATATCCAATACTCTTAAATAAGCATTTGAGGGAGTCTGTAGACTTAATCAGAGCCTGCCACATCTGTGCCGAAGTAATGAGCCGGAGCAAACTGATAACACATGTAAAAGAAACACACAATTTAAAAGCATATGCTTGCAggaagtgtccagcattactaaCAAATGCTAAATTGTATGCAGACCATAATTTGAAAGCTCATACAAAGGGGGCTATTAAATGTATTGATTGTAGCTGTACATTCCAAACCATGCAAGCTATGTATGCCCACCAACACATTCATTCGAGGAGATCTTGCCCCAACTGTGATAAAATCTTCCAAAATCGTCCGTGCTATTCATATCACATCAAAAAATGCTGTAAACTAGATCCCAAGCACAAAAGCAAACATGTACCAGTAACATTACAGAATAAACAAAATAGGAAGATTAAGATGGGGAAGCGAGGCAGCATCGACAATAAATGCATTTGCGATCACTGCAACAAGACATTTGCTGCAAAGAAGTTCCTGTCTGCCCATATACAAATAGTCCACTTAAAGAATACTCATAGACCCTGCGTTTACTGCGGCAAGCAGTTTGCAGCTGCCCACATGTCCACGCATTTGAAGAGCCACACAAAACCCAGTTTCAAGTGTGAGCATTGCGGTGCTGTGCTCAAATCTAAGCTGGGGTTCATGCAGCACCTACGACTCCATACCGGAGAGAGACCTTACAAGTGTAACCTCTGCGGGGAACAATTCTCTTCTTCTTCAAGGAAGTCAGAACATAAACGGAACACACACTTCAAATCTGATGTTGTGCTGAAGAATGTTTGTCAGTTGTGTCCGGCTAAGTATAGATTGCCTGGTAAACTAAAAATGCATATGGAGAAAGTACATGGTGATGAGGGAAGTGAAGAAGTCAGGTTTAAGTGTGATATATGCCATGAGATGTTTATTGTGGATATTGAAGCCCAAGGCACACCGCAGCAGCTCTGCCATCAATGTATATCCTGCATCACTTCCTTCCTACCATTCCTGAAACTATGCAAAGAATCTGCTGTAAAATGGAACCGTCTGTCGAAAAATTTGATTAATTTCACATCACACAACAGAAGTAACACCGCCTTCATCACCGTCGACGGTTACAAAGTCAGGACTGTGTTTGAGAGAAGAAATAGAAGTAAAAATAGTCTACATAACGTTACTAGACGGATAAACCAATTGGAAAGGGCGAGAAAACAAACACAAGTTGAGACTGAAATAGAAGGACCAGGAAAGTTCAGTTATACATGCGAAGAATGCGGATCGAAGTATACAAAGCTGCGTAAGATAAATGTTCACTTAGCCAATCAGAACAAGCGATTTTGCGAATATTGCCACGGCATTACCAGCCTTAAAGCTTTTGGAGATCATTTGCAGACACATTCAATAACTTTCTTTACTTGTGAATCTTGTAACCAGCCCTTTGAATGCAAAAATCAGTTTGCGAAACACAAATTACTGCATAAAGGCAGGAATATGTGTGGGGAATGCAAAGTTACATTTCCTTCAGAGGATATCCTGACGCTGCATGTCCACAGAAAACACGAACCGGACGTCTGCTCAAATTGTTACAGAAAGTTTTCGAATCGGGTATGCTTTTACAAACACAGAAGTAAATGTAAAGCTAGAGAATTTAAGCAGTATGTCTGCGACTACTGCTCCAAACGATTCAGCGATAGGAGCTCGATAAAGACGCATATAACTTTAGTGCATTGTAAGAAATTACTGCATCAATGTGAAGAATGCGGCAAACAGTTTAGCAGTGCGTCGCACTTAGAGGAACACAAAGAAACGCACGACGTCGTGTTGGATAGATATGTGTGTCCTTATTGCGATGGGAAAGCGTATAGCTCCTCTGGTGGCTACAGAAGGCATTTAAGACTGAAACACTACAGAGAAAACCCTCATCTAAAAGAGGAAGCGAAATATACATGCGAGGTCTGCGATTTAAAGTTCGTCGACGAAGACCCCAACTTCCCGCCCGGCCTCTGCAGCGCCTGCGCCGGAGACGTGGTAACCGCTGCCAAATTCAAACATCTTGTCGATAAATCCGCCCAAAGCTGGAGCGACGCGCTCTCGCACCTCTCGCAGATAGACCTTGTGGGCGATGACAAAACTCTGCTGTTTATGTACGAGGAACGCACATTAATAATCTGCAAGAAAAGAGTTAAGAACAAAAAATCTGTTATCACAACCCTGGCGAGTTTAGAGAAGAAGAAACAGAGCGACGAAGGCGCCTGGACTTGCCCATATTGCGAAAAGTCGTTCGTTTCTGTCAGCAATTTCAATGAGCATCTGAAAACCAGCGCGCAGAGAATGTGCAAATGCGGCCTGCTTATGGACAAGTCTGAGCTTTGCAAGCATTTGAGAGACACGCACGGGGAACACGTTTTTGAGTGTAGCCTCTGCCACGACCAGTTCCGCAGTCGCTGTGAAGTGAAGTGGCATAAAATGCGTTATCACAGTTCGAAATCGTTCACCTGTGAAAACTGCGGTCGGGGATATATGAGTGGAAGAAGCTTGCGGGCTCATTATTACTCACACACTCGGTTCGATTGCCATTGCGGTAAAGGTTTCGAAAGCAGCCGCTGCTATAGACATCACAAAACTATGTGCAAACCTCAAACGAAATCCGATTTTGACTTGTATGAATGTAATGACTGCGGACAACAATACGCCAAGAAAGATTCTCTAAGGATACATATTATACAGAAACATATGAACGTGCTACCGTTCGTTTGCCAGGTTTGCGGAAAGCGAACATCAACCCTTAGTCACTTAAGATCGCACTCCAAGGTCCACGACCGGAATAGGAAGACTTTTGAATGCCACTGCGGTGCAAAGTTTCGGACCGAGTTGGGTCACCGTCTTCATATGAGAGTTCATAGCGGTGTACGACCTTTTAAGTGCGATGAATGTGAGGAGTCGTTTATATCTGCGTCTAGACGCTCAGACCACATGAAGAGACGGCACAGAAGTATGAAGGATATGGCCCATGGCTGCGACCAGTGCCAGGCTCGCTTCATCAGGCCGTGGGAGCTGAAGAAGCATTATAAGCAAACTCATAGTTCGATAATAAAAGAAGAGACTGAATGTCCAGGCGGCGTGTGTGTCGCTTGCGCCAGCGCGGCGCTCTCAGCGGAGGAGTTCCGCATATTCGTGCGCAATGCCCAGTCCCTCTGGCGTCGGGCTATCACAAACCTCTCCCAAATCCCCCAAGAGGCTTCGGAGAAAGCCAAATCCTTATGCGCCCTCGTCTCTCCCCACATAACCATCGACACGCATAACGACTTCGACGGTGGCGACCGCACCGCAGTCATCAACAGATTACAAACGAAATTGAATAGGAAACACGAGCGGAAGCCTCGAGTTCTCCGCACCGGGGCCACGGTCTCGTGCCCAGACTGTAACAAGCGATTTACAGCTCCGCATTTGCTGCAAACGCATTTGGCGAATAGTGATCGGAAAGATGCTTGTTCCGTTTGCGGCGCTGTCGTGGCTAAAGGCGCGGAGTTGAAGCAGCATCTCGAAACAGTTCACAATGGAACTGCGTTCCTCTGCAAAGACTGTCCGACTGTTGTGATCTCCGAGGCTGAGTTGAAAAAGCACGAGGCCACAGCGCATAAACCAGGAGCGTTGAATTGCAGTGCCTGTGGAAGGACTTTTACGCGAAAGGTGTCTTACGATAGTCATATAGAAATGCACGTGTTACTGACTTGTAGAAGCTGCGGTGCCCAGTTCTCCAATAGGAGCTGTTTCCGTGAACATAGATCGGTTTGCGAGCCGAACGCGAAACCGAAGTCTGTACCTCGCTTGAGGAGGTCCAACAATCGTGATCCAGGTAATTACGTCTGCGATTACTGTCAAAAGAGCTACAACTCTCGGCCGCAGTTGAAGAACCATATCCTATGGATCCATTTGGATCACAGACCTCATCAGTGTTCGTGGTGCGGTAAAAGGTTTTACACATCAGCCAGGTTGACGGAACACTCTGTTGTtcacacgcgagttaggaactTTGAATGCGATATATGCGGAGCTAAATTAGTGTCCAAGAGTGCTGCTATCTACCACAGACGGCGGCATACGGGCGAGAAACCTTACGTATGCGACGACTGTGGAACAGCCTTTATTTCCTCATCAAGGAGGTTGGAGCACGCAAAGAGGAAACATAACAAAGGCGTACGATTTAAATGTCTGGAATGTCCAGCCAGCTTTGTTAGGAGACGTGAACTTGAAAAGCACTCTGAgaagaatcataaaaaaatacgattatTTGTGGATAAGCATGCTTCTGAAGAACAAATTATTAGCTAG
Protein Sequence: MSRQVDVKALISHIVKGDGLDKCRICMGDTSQGQVHLTDTVMMDGDKAVTLSELLEIITGVEVEFEEVLPSSLCLTCSVAAFEAAEFKNLAQRANRQWNNVFDLLDHVPEHKFAKTSSKIVAVITNNCINISDECTKPPVEKPKDRPMQKRPGKQQDCQCQTCGKKFPYPILLNKHLRESVDLIRACHICAEVMSRSKLITHVKETHNLKAYACRKCPALLTNAKLYADHNLKAHTKGAIKCIDCSCTFQTMQAMYAHQHIHSRRSCPNCDKIFQNRPCYSYHIKKCCKLDPKHKSKHVPVTLQNKQNRKIKMGKRGSIDNKCICDHCNKTFAAKKFLSAHIQIVHLKNTHRPCVYCGKQFAAAHMSTHLKSHTKPSFKCEHCGAVLKSKLGFMQHLRLHTGERPYKCNLCGEQFSSSSRKSEHKRNTHFKSDVVLKNVCQLCPAKYRLPGKLKMHMEKVHGDEGSEEVRFKCDICHEMFIVDIEAQGTPQQLCHQCISCITSFLPFLKLCKESAVKWNRLSKNLINFTSHNRSNTAFITVDGYKVRTVFERRNRSKNSLHNVTRRINQLERARKQTQVETEIEGPGKFSYTCEECGSKYTKLRKINVHLANQNKRFCEYCHGITSLKAFGDHLQTHSITFFTCESCNQPFECKNQFAKHKLLHKGRNMCGECKVTFPSEDILTLHVHRKHEPDVCSNCYRKFSNRVCFYKHRSKCKAREFKQYVCDYCSKRFSDRSSIKTHITLVHCKKLLHQCEECGKQFSSASHLEEHKETHDVVLDRYVCPYCDGKAYSSSGGYRRHLRLKHYRENPHLKEEAKYTCEVCDLKFVDEDPNFPPGLCSACAGDVVTAAKFKHLVDKSAQSWSDALSHLSQIDLVGDDKTLLFMYEERTLIICKKRVKNKKSVITTLASLEKKKQSDEGAWTCPYCEKSFVSVSNFNEHLKTSAQRMCKCGLLMDKSELCKHLRDTHGEHVFECSLCHDQFRSRCEVKWHKMRYHSSKSFTCENCGRGYMSGRSLRAHYYSHTRFDCHCGKGFESSRCYRHHKTMCKPQTKSDFDLYECNDCGQQYAKKDSLRIHIIQKHMNVLPFVCQVCGKRTSTLSHLRSHSKVHDRNRKTFECHCGAKFRTELGHRLHMRVHSGVRPFKCDECEESFISASRRSDHMKRRHRSMKDMAHGCDQCQARFIRPWELKKHYKQTHSSIIKEETECPGGVCVACASAALSAEEFRIFVRNAQSLWRRAITNLSQIPQEASEKAKSLCALVSPHITIDTHNDFDGGDRTAVINRLQTKLNRKHERKPRVLRTGATVSCPDCNKRFTAPHLLQTHLANSDRKDACSVCGAVVAKGAELKQHLETVHNGTAFLCKDCPTVVISEAELKKHEATAHKPGALNCSACGRTFTRKVSYDSHIEMHVLLTCRSCGAQFSNRSCFREHRSVCEPNAKPKSVPRLRRSNNRDPGNYVCDYCQKSYNSRPQLKNHILWIHLDHRPHQCSWCGKRFYTSARLTEHSVVHTRVRNFECDICGAKLVSKSAAIYHRRRHTGEKPYVCDDCGTAFISSSRRLEHAKRKHNKGVRFKCLECPASFVRRRELEKHSEKNHKKIRLFVDKHASEEQIIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -