Basic Information

Insect: Pasiphila rectangulata
Gene Symbol: -
Assembly: GCA_963082625.1
Location: OY720246.1:6525212-6555645[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00015 0.016 16.8 1.5 1 23 932 954 932 954 0.96

2 20 0.00049 0.051 15.2 1.0 1 20 960 979 960 982 0.94

3 20 0.0012 0.13 13.9 5.6 1 23 1001 1023 1001 1023 0.98

4 20 0.00017 0.018 16.6 4.1 1 23 1029 1051 1029 1051 0.99

5 20 6.5e-05 0.0068 17.9 5.3 1 23 1057 1079 1057 1079 0.97

6 20 9.2e-06 0.00098 20.6 8.4 1 23 1085 1107 1085 1107 0.97

7 20 4.4e-06 0.00047 21.6 2.6 1 23 1113 1135 1113 1135 0.97

8 20 0.00018 0.019 16.5 6.7 1 23 1141 1163 1141 1163 0.97

9 20 3.4e-05 0.0036 18.8 6.4 1 23 1169 1191 1169 1191 0.98

10 20 8.5e-07 9e-05 23.8 1.9 1 23 1197 1219 1197 1219 0.98

11 20 8.7e-05 0.0092 17.5 7.9 1 23 1225 1247 1225 1247 0.98

12 20 0.00023 0.024 16.2 6.8 1 23 1253 1275 1253 1275 0.97

13 20 7.1e-06 0.00075 20.9 5.6 1 23 1281 1303 1281 1303 0.98

14 20 3e-05 0.0032 18.9 6.7 1 23 1309 1331 1309 1331 0.97

15 20 1.9e-05 0.002 19.6 5.2 1 23 1337 1359 1337 1359 0.98

16 20 4.1e-06 0.00043 21.7 3.8 2 23 1366 1387 1365 1387 0.98

17 20 2.9e-05 0.0031 19.0 8.0 1 23 1393 1415 1393 1415 0.97

18 20 3e-06 0.00031 22.1 6.5 1 23 1421 1443 1421 1443 0.98

19 20 0.0013 0.14 13.8 1.0 1 23 1450 1472 1450 1472 0.96

20 20 0.074 7.8 8.3 4.8 1 23 1482 1504 1482 1504 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00015	0.016	16.8	1.5	1	23	932	954	932	954	0.96
2	20	0.00049	0.051	15.2	1.0	1	20	960	979	960	982	0.94
3	20	0.0012	0.13	13.9	5.6	1	23	1001	1023	1001	1023	0.98
4	20	0.00017	0.018	16.6	4.1	1	23	1029	1051	1029	1051	0.99
5	20	6.5e-05	0.0068	17.9	5.3	1	23	1057	1079	1057	1079	0.97
6	20	9.2e-06	0.00098	20.6	8.4	1	23	1085	1107	1085	1107	0.97
7	20	4.4e-06	0.00047	21.6	2.6	1	23	1113	1135	1113	1135	0.97
8	20	0.00018	0.019	16.5	6.7	1	23	1141	1163	1141	1163	0.97
9	20	3.4e-05	0.0036	18.8	6.4	1	23	1169	1191	1169	1191	0.98
10	20	8.5e-07	9e-05	23.8	1.9	1	23	1197	1219	1197	1219	0.98
11	20	8.7e-05	0.0092	17.5	7.9	1	23	1225	1247	1225	1247	0.98
12	20	0.00023	0.024	16.2	6.8	1	23	1253	1275	1253	1275	0.97
13	20	7.1e-06	0.00075	20.9	5.6	1	23	1281	1303	1281	1303	0.98
14	20	3e-05	0.0032	18.9	6.7	1	23	1309	1331	1309	1331	0.97
15	20	1.9e-05	0.002	19.6	5.2	1	23	1337	1359	1337	1359	0.98
16	20	4.1e-06	0.00043	21.7	3.8	2	23	1366	1387	1365	1387	0.98
17	20	2.9e-05	0.0031	19.0	8.0	1	23	1393	1415	1393	1415	0.97
18	20	3e-06	0.00031	22.1	6.5	1	23	1421	1443	1421	1443	0.98
19	20	0.0013	0.14	13.8	1.0	1	23	1450	1472	1450	1472	0.96
20	20	0.074	7.8	8.3	4.8	1	23	1482	1504	1482	1504	0.98

Sequence Information

Coding Sequence: ATGAATCCTGAGCATCACAATATCAATACGGGTGGAGGCCAGCCTCCTGGGAGCTCTGAGTCTCAAAATCAAAGACAAGCTCAGCAGCAGCAACAGCAGGTGACGTTGCCTGCTACCACGTCTGCTACCGACTTACGGGTGAACTCTGCAGCTGTGAACGTTGCGTTGTCCAGCGTTGCAAAGTACTGGGTGTTTACGAATTTATTCCCCGGACCAATTCCTCAAGTGTCCGTTTATGGGCTTCCAACTGGGACAAGAATTGAAAATGGAAAAGCTGTACAGGATCTTGGTCAAGCACATAGCATACTCAATGGAGACCCAAACATCATACTGGGACATCACGGAGGGCAGTCCCAGGTCACAGTATCTGCTGCCCAACAGATTCCCGTCTCTCAAATCATTGCCACACAGTCTGGACAGACACATGAAGCGCAGTTGGTGGCGCACAGTCAACAGCAGGAGCTGCAGGCCACCAATCAGGTCCAGGTCACCACATCGCATCACCAGGTACCCACTAACCGGGTCGAATTTGTTCAACACCATAACATTGATATGGGACATCACACACAACAGCAACACATAATGCAACAACAGCTTATGACCGCCACCCGGCCAGAGCATTCAAATCAACAGATCCAACTAACAGTGAGTGAGGACGGCATCGTCACTGTAGTGGAACCAGGCAGCAGTAAGATGGTGGAAAAGGAAGACCTGCATGAAACGATCAAGCTTCCGGCGGACCATACGCTGACCGTTCATCAGTTGCAGCAGATTGTCGGCCAGCAAGTGTTAGACAGCGTGGTTCGCATCGAGCAGGCGACGGGCGAGCCGGCCAACATCCTCGTCACGCACAACCCCGACGGCACCACGTCCATAGAAGCCAGCGCCGGCGACCCGCTCGCCGTCGTCAAGGACGAGAAGAGCCAGAAGATTGAGACGGCGCAGTTCGCTATACCTACGGAGATCAAGGAAATGAAGGGCATTGATTTGAAGGTAATTAATTGTAAGCCTTCATTGTCCCACTGTCCCAATATCCTCGTCGGGCACGATCCTGACGGCACCACGCCCATAGAAGCCAGCGCCGGCGACCCGCTCGCCGTCGTCAAGGACGAGAAGAGCCAGAAGATTGAGACGGCGCAGTTCGCTATACCTACGGAGATCAAGGAAATGAAGGGCATTGATTTGAAGGTAATTAATTGTAAGCCTTCATTGTCCCACTGTCCCAATATCCTCGTCGGGCACGATCCTGACGGCACCACGTCCATAGAAGCCAGCGCCGGCGACCCGCTCGCCGTCGTCAAGGACGAGAAGAGCCAGAAGATTGAGACGGCGCAGTTCGCTATACCTACGGAGATCAAGGAAATGAAGGGCATTGATTTGAAGGTAATTAATTGTAAGCCTTCATTGTCCCACTGTCCCAATATCCTCGTCGGGCACGATCCTGACGGCACCACGTCCATAGAAGCCAGCGCCGGCGACCCGCTCGCCGTCGTCAAGGATGAGAAGAGCCAGAAGATTGAGACGGCGCAGTTCGCCATACCTACGGAGATCAAGGAAATGAAGGGCATTGATTTGAAGGTAATTAATTGTAAGCCTTCATTGTCCCACTGTCCCAATATCCTCGTCGGGCACGATCCTGACGGCACCACGTCCATAGAAGCCAGCGCCGGCGACCCGCTCGCCGTCGTCAAGGACGAGAAGAGCCAGAAGATTGAGACGGCGCAGTTCGCTATACCTACGGAGATCAAGGAAATGAAGGGCATTGATTTGAAGGTAAATAATTGTAAGCCTTCATTGTCCCACTGTCCCAATATCCTCGTCGGGCACGATCCTGACGGCACCACGTCCATAGAAGCCAGCGCCGGCGACCCGCTCGCCGTCGTCAAGGACGAGAAGAGCCAGAAGATTGAGACGGCGCAGTTCGCCATACCTACGGAGATCAAGGAAATGAAGGGCATTGATTTGAAGGTAATTAATTGTAAGCCTTCATTGTCCCACTGTCCCAATATCCTCGTCGGGCACGATCCTGACGGCACCACGTCCATAGAAGCCAGCGCCGGCGACCCGCTCGCCGTCGTCAAGGACGAGAAGAGCCAGAAGATTGAGACGGCGCAGTTCGCTATACCTACGGAGATCAAGGAAATGAAGGGCATTGATTTGAAGGTAAATAATTGTAAGCCTTCATTGTCCCACTGTCCCAATATCCTCGTCGGGCACGATCCTGACGGCACCACGTCCATAGAAGCCAGCGCCGGCGACCCGCTCGCCGTCGTCAAGGACGAGAAGAGCCAGAAGATTGAGACGGCGCAGTTCGCCATACCTACGGAGATCAAGGAAATGAAGGGCATTGATTTGAAGGTAATTAATTGTAAGCCTTCATTGTCCCACTGTCCCAATATCCTCGTCGGGCACGATCCTGACGGCACCACGTCCATAGAAGCCAGCGCCGGCGACCCGCTCGCCGTCGTCAAGGACGAGAAGAGCCAGAAGATTGAGACGGCGCAGTTCGCTATACCTACGGAGATCAAGGAAATGAAGGGCATTGATTTGAAGACTGTGAACGCGATGAACATGGAAGGCGCTGTGGTGAAGATATCAACGGGCGCGCCGGAGCACGACCTACACGCCATGTATAAAGTGAACGTGGAGGATCTGTCGCAGTTGTTGGCGTACCACGAGGTCTTCGGCAAGATGGGATCGGATGGACAGCCTCAAGCCAAAGTTGGTGAAATTGAAATAGAAGTGCCAGGAACAAGTGCTGGTATGTCTGAAGCTGAGCAGTCTCCCGGCCACCACGCGTGCGACATTTGCGGGAAAATATTCCAGTTCCGGTATCAGCTCATCGTGCACAGacGTTACCACGGCGAGACCAAGCCTTTCACGTGCCAAGTATGCGGCACTTCATTCGCGAACCCCGTAGAGCTATCTCGGCACGGGAAATGTCATCTCGCCGGTGACCCAGCCGAAAGACACGCAAAGAGAATGGCCCAAGACAAACCTTATGCATGCTCCACTTGCCATAAAACATTTTTGCGTAAGGAGCACCTAAACAACCATGTTCGCAGTCACACGGGAGAAACGCCATACAGATGTGAATTCTGCGCGAAAACCTTCACCCGGAAAGAACACATGGTGAACCATGTGCGAAAACATACGGGCGAAACGCCGCATCGCTGTGATATCTGCAAGAAGAGCTTTACACGGAAGGAGCACTTTATGAACCATGTCATGTGGCATACAGGTGAAACGCCACACCATTGTACGATATGCGGGAAGAAGTATACTAGAAAGGAACATTTGACAAATCACATGAGATCGCACACGAACGATACCCCGTTCCGTTGTGATCTGTGCGGCAAATCCTTCACGAGAAAAGAGCATTACTCCAATCACATTTTGTGGCACACTGGCGAGACACCTCACCGCTGCGATTTCTGTTCTAAAACGTTCACTCGTAAGGAGCACCTACTCAATCACGTCAGGCAACACACAGGGGAATCGCCACATCGCTGCAACTACTGTTCCAAGTCCTTCACGCGGCGCGAGCACCTTGTCAACCACGTGCGACAACACACTGGCGAGACGCCTTTCCAATGCGGCTACTGTCCTAAGGCTTTCACGAGGAAAGACCATCTAGTGAACCACGTGCGGCAACACACCGGCGAATCTCCTCACAAGTGCTCGTTTTGCACCAAATCCTTTACTCGCAAAGAACACCTTACGAACCACGTGCGACAGCACACCGGCGAATCGCCGCATCGCTGCACTTTCTGTGCCAAATCGTTTACCAGGAAGGAGCATCTTACCAATCACGTCAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTATTGCCCTCGCGCGTTCTCGAGAAAGGAGCATCTGAACTCGCACCTGCGCCAACACACGGGCGTCACGCCGCACTCCTGCTCGTACTGTAGCAAGACTTTCACGAGGAAGGAGCATCTCGTCAACCACGTACGGAAACACACTGGAGAAACACCGTTCAAGTGCACGTTCTGTTCGAAGTCGTTTTCGCGCAAGGAGCATCTAACGAATCACGTTAATCTGCACACCGGGGAAACGCCGAACAAATGTCCGTTCTGCACTAAAACCTTCTCTAGAAAGGAACATCTAACAAACCATGTCAGAATACACACAGGAGAGTCGCCACACCGGTGCGAATTCTGTCAGAAAACTTTCACTCGCAAAGAGCATTTAACGAATCACATGAAACAACACACGGGTGGCGCGGCTCACACGTGCAAGATCTGCCAGAAACCTTTTACCAGGAAAGAACATCTACAGACGCATATGAGGTACCACAGTTGCGGCGACCGTCCTCACACCTGTGGCGAATGCGGCAAATCATTCCCATTGAAGGGTAACCTGATGTTCCACGAGCGATCACACAACAAAGCCGGCGCCGGCCCCAGGCCTTTCCGGTGTGATATCTGTAGCAAGGACTTCATGTGCAAAGCTCATTTACTAAGTCACCGGAGGATACACGCCGACGCGGGCGAAGAGGGCTCCGCCGAGGCGCAGGCTGAGGGCGAGGAGTGTCTGGCCACCGCCACCGCCGACTGCACCAGTAAATGCATCAAGGTGGAGCTGGAGGCAGCGGAACGGACAGAGCAAAGAGTTTCCATTGAAAATGGACCAAATGAAACTATAGTGGTCCAGCCTTCTCTCGATTCCCCAAACCACATAGTAGCTCAAACACAAAACACAGTGATGCAAATAAGCAGTCAAGTGCAGGTACGGGTGCCGTCATCAAGTCCGACAGCTGTACCGACGGGCACTTTCACTCACACAGTGACAGCGCAGCACCACCCGGGCGCCACGATTGCGCACCACCCTGTCACTGTGAACTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGSSESQNQRQAQQQQQQVTLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDLGQAHSILNGDPNIILGHHGGQSQVTVSAAQQIPVSQIIATQSGQTHEAQLVAHSQQQELQATNQVQVTTSHHQVPTNRVEFVQHHNIDMGHHTQQQHIMQQQLMTATRPEHSNQQIQLTVSEDGIVTVVEPGSSKMVEKEDLHETIKLPADHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAGDPLAVVKDEKSQKIETAQFAIPTEIKEMKGIDLKVINCKPSLSHCPNILVGHDPDGTTPIEASAGDPLAVVKDEKSQKIETAQFAIPTEIKEMKGIDLKVINCKPSLSHCPNILVGHDPDGTTSIEASAGDPLAVVKDEKSQKIETAQFAIPTEIKEMKGIDLKVINCKPSLSHCPNILVGHDPDGTTSIEASAGDPLAVVKDEKSQKIETAQFAIPTEIKEMKGIDLKVINCKPSLSHCPNILVGHDPDGTTSIEASAGDPLAVVKDEKSQKIETAQFAIPTEIKEMKGIDLKVNNCKPSLSHCPNILVGHDPDGTTSIEASAGDPLAVVKDEKSQKIETAQFAIPTEIKEMKGIDLKVINCKPSLSHCPNILVGHDPDGTTSIEASAGDPLAVVKDEKSQKIETAQFAIPTEIKEMKGIDLKVNNCKPSLSHCPNILVGHDPDGTTSIEASAGDPLAVVKDEKSQKIETAQFAIPTEIKEMKGIDLKVINCKPSLSHCPNILVGHDPDGTTSIEASAGDPLAVVKDEKSQKIETAQFAIPTEIKEMKGIDLKTVNAMNMEGAVVKISTGAPEHDLHAMYKVNVEDLSQLLAYHEVFGKMGSDGQPQAKVGEIEIEVPGTSAGMSEAEQSPGHHACDICGKIFQFRYQLIVHRRYHGETKPFTCQVCGTSFANPVELSRHGKCHLAGDPAERHAKRMAQDKPYACSTCHKTFLRKEHLNNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLTNHMRSHTNDTPFRCDLCGKSFTRKEHYSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNSHLRQHTGVTPHSCSYCSKTFTRKEHLVNHVRKHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPNKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGGAAHTCKICQKPFTRKEHLQTHMRYHSCGDRPHTCGECGKSFPLKGNLMFHERSHNKAGAGPRPFRCDICSKDFMCKAHLLSHRRIHADAGEEGSAEAQAEGEECLATATADCTSKCIKVELEAAERTEQRVSIENGPNETIVVQPSLDSPNHIVAQTQNTVMQISSQVQVRVPSSSPTAVPTGTFTHTVTAQHHPGATIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -