Basic Information

Insect: Pasiphila rectangulata
Gene Symbol: ct_1
Assembly: GCA_963082625.1
Location: OY720256.1:3160846-3178747[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 4.1e-27 5.6e-23 81.9 0.0 3 71 161 230 159 236 0.94

2 3 7e-32 9.4e-28 97.2 0.0 4 77 563 637 561 639 0.96

3 3 7.3e-31 9.9e-27 93.9 0.0 3 75 766 839 764 843 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	4.1e-27	5.6e-23	81.9	3	71	161	230	159	236	0.94
2	3	7e-32	9.4e-28	97.2	4	77	563	637	561	639	0.96
3	3	7.3e-31	9.9e-27	93.9	3	75	766	839	764	843	0.95

Sequence Information

Coding Sequence: ATGCTCCGCTCACTAGACTTGGGCAGTGAGCGACCTGAGCGCCTCGAGCGACTTGAGCGCGAGCGGCCCGAGCGCCCCGAGCGACTTGAGCGCGAGCGCCCCGAGCGACTTGAGCGCGAACGGCTCGAGCGCAAGCCAGAGCGCTCGCCGAGCGTGGCGCCGCGCGACGAGCGGAACTCAATCGAGCGCGAGCGGAGCGCCGAGCGAAGAGAACCAGGTCCCGAGGACTGGCCGAGCACGCCTCCGCTCAACAATAACACCACTCATCACAACAACAACGGGCCGACGCCGCTGCCTCTGCCGCCGCCGAGTCCCTTCCGCTTCGACGATCACCGTCCCTATCGCTTCGCAGACGACATGGGCCCCCTCCCGCCAGGCGCGCTGGTCGGCAGACTCGGAGACTCCTTAATCCCCAAAGGAGATCCCATGGAAGCGAGATTGCAAGAGATGCTACGATACAACATGGACAAATACGCGAACAGCAATCTGGACACTCTGCACATCAGTCGAAGAGTCAGAGAGTTGCTCTCGGTCCACAACATCGGGCAGAGATTGTTCGCTAAGTACGTCCTTGGGCTGTCGCAAGGGACGGTGTCGGAGCTCCTGTCGAAACCGAAGCCGTGGGACAAGCTGACGGAGAAGGGCAGGGACTCGTATAGGAAGATGCACGCGTGGGCTTGCGACGAGACCGCTGTGATGCTACTCAAGTCTTTGATCCCTAAGAAAGTTGGTTCAAAAGATGGCAGCATTGGACCGGGAGGGTTTGGGAGGTCTGATGGAGAAGGGGACGACAGACTTGCTCACATCCTCAATGAAGCCTCGCACATGATGAAGACACCCACTGGTGTGCCGCTCAACGACGATTCGAGAAGCAACGAAGACTCCAGCTCGCCAAGAACACAATGTCTTTCACCGTTTTCTAAGGATTCGAGCCAAAACCGAAGGCTGAAGAAGTATGAGAACGATGATATTCCTCAGGAGAAGGTGGTGAGAATCTACCATGAGGAGTTGGCCAAGATCATGACCAGGCGAGTGGATGATATCCGCCACAACCGGGAGAACTTCCCTGGTATGTTTCCTCCTTTTTTCAGTGGTGGCATGCCCCCTCACATGGAGCGGCCCCCAGAAGACATCCGCATGGCTCTAGAAGCCTACCACAGAGAACTAGCCAAGATCCAACCCGGAGGTAACATCCCAAATCTCCACAGTTTGCCAGGAATGCCGCCTTTCCCCAACCTCCTCGCATTGCAGCAGCAAGCGATGCAACAAGCCCAGAACCAACATATAAACGGCTCCGGAGCTGTCCAAGATCTCTCACTCCCAAAGGACAAGAACGCCAAAATGAACGGAATGACTGATAGTGATAAGGAACGTTCTATGGACGCTGAGGAGGCGATCAGACACGCGGGCAGCGCGTTCTCCCTCGTCCGACCGAAGTTGGAACCTGGACAGCAATCTACAGGGTCTTCTGCGTCCAGCCCTCTTGGAAACGCCATTCTTCCGCCAGCGATCACGCCAAATGACGACTTCAACACTTCAGCGGCAGCCAGTCCTCTTCAACGCATGGCATCCATCACCAACAGCTTGATCTCTCAGCCCAACAACCCTCCACATCACCCTCCACAACAAAGATCTATGAAGGCAGTTCTCCCACCAATCACACAGCAGCAATTCGATCTCTTCAACAGCTTAAACACGGAAGATATTGTTCGGAGAGTCAAAGAGGCTCTGAGCCAATATTCCATCAGTCAAAGACTCTTCGGAGAATCAGTCCTAGGATTGTCGCAAGGGTCGGTGAGTGACCTGCTCGCGCGGCCAAAGCCCTGGCACATGCTGACGCAGAAGGGTAGAGAGCCCTTCATCAGAATGAAGATGTTCCTGGAAGATGACAACGCGGTTCACAAACTGGTCGCGAGCCAGTACAAAATCGCGCCAGAGAAGTTGATGAGGACTGGAAACTACAGCGGAGCACCGATATGTCCGCCAATCATGAACAAGCCAATGCCTCCAACGCAGAAGATGATCTCAGACGCCACCTCCCTCCTCAGCAAGATGCAGCACGAGCAACTCCTGGGACCCGGTCACCTGGGTCACATGGGCCAGCCTCCACCGCTGCTGCTCACTCCCCCCGGCTTTCCCCCGCACCACGCGGTCACCTTACCCCCTCAGCATCACGATAACAACAATAAGGAACGGAAGCCACAGCCACCCTCTCAGTCGCACCATCATCCTCCAATCATGCGCAGTCTCCATCAGCACATATCCCCGAGTGTATACGAGATGGCCGCGCTAACCCAAGACCTCGACACGCAAACGATCACGACTAAGATTAAGGAGGCTTTGCTGGCGAACAACATTGGTCAGAAAATCTTCGGGGAAGCTGTACTTGGTCTATCACAGGGATCGGTCAGCGAGCTGCTATCGAAGCCAAAACCATGGCATATGCTAAGTATCAAAGGCAGAGAGCCTTTTATTCGAATGCAACTTTGGCTCAGCGACGCTCACAACATCGACCGCCTCCAAGCGCTGAAGAACGAGCGTCGAGAGGCCAACAAGCGACGTCGCTCCAGCGGGCCTGGACAGGACAACTCTTCCGACACCTCATCCAATGACACGTCAGAGTTCTACCACTCCAGCTCGCCGGGACCGACCTCTGGAGCCCCCTGCGCTAAGAAGCAGCGGGTGCTTTTCTCTGAGGAACAGAAAGAGGCTTTGAGACTTGCGTTCGCTCTAGACCCCTATCCCAACATGCCGACGATAGAATTCCTTGCCTCAGAATTAGGGTTGTCAACGCGAACGATAACCAACTGGTTCCACAACCACAGAATGAGGTTAAAGCAGCAAGCACCGCACGGTCTTCCAGCTGAGCCGCCAGCGAGAGACCAGTCTTCAGCTCCGTTCGACCCTGTTCAATTCCGTCTTCTTCTAAACCAGAGATTACTGGAACTGCAAAAGGAAAGAATGGGTCTGGCGGGAGTGCCTCTACCATACCCGCCGTACTTCGCCGCTAACTCAAACCTCGCTGCATTAATCGGGCGTGGGTTAATACCTTCTGAGGACGCGCCTAAAGACCAGAGCGGAGGCCTAGATCTATCCATGCCACTGAAACGGGAACCGGACGGCGAAGACTACGAGGACGATGACGTTGAAAGTAATTTAGGATCGGAAGACTCGATGGACGACGAGTCAAAGACTGAGCCGAAAGCGACGTCCACGCCGACCGCCCGGTCTAGCAGACGGAAACCGGCCGCACCGCAGTGGGTCAACCCCGACTGGCAGGAGGACAAGCCACGGAACCCTGATGAGGTCATCATCAACGGAGTCTGCGTGATGAGGAGCGACGACTTCAGACGGGAGTCTGAGGAGACGGTCCGCATCGAGCCCTCGCCGGTGCCGCGGGAAggctcgcccgcgccgccgcggACGCCGCAGACGCCGCTCACGCCGCAGACCCCGCGGCCGCCGCACACGCCCGACGGCGTCATACCGGACGACAAGATCAAGTCGGAGGCGGACGAAGACCGGTGGGAGTACTGA
Protein Sequence: MLRSLDLGSERPERLERLERERPERPERLERERPERLERERLERKPERSPSVAPRDERNSIERERSAERREPGPEDWPSTPPLNNNTTHHNNNGPTPLPLPPPSPFRFDDHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDETAVMLLKSLIPKKVGSKDGSIGPGGFGRSDGEGDDRLAHILNEASHMMKTPTGVPLNDDSRSNEDSSSPRTQCLSPFSKDSSQNRRLKKYENDDIPQEKVVRIYHEELAKIMTRRVDDIRHNRENFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHSLPGMPPFPNLLALQQQAMQQAQNQHINGSGAVQDLSLPKDKNAKMNGMTDSDKERSMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDDFNTSAAASPLQRMASITNSLISQPNNPPHHPPQQRSMKAVLPPITQQQFDLFNSLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPIMNKPMPPTQKMISDATSLLSKMQHEQLLGPGHLGHMGQPPPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPQPPSQSHHHPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLASELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPSEDAPKDQSGGLDLSMPLKREPDGEDYEDDDVESNLGSEDSMDDESKTEPKATSTPTARSSRRKPAAPQWVNPDWQEDKPRNPDEVIINGVCVMRSDDFRRESEETVRIEPSPVPREGSPAPPRTPQTPLTPQTPRPPHTPDGVIPDDKIKSEADEDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01338275;
90% Identity: iTF_01443621;
80% Identity: iTF_01161201;