Prec023005.1
Basic Information
- Insect
- Pasiphila rectangulata
- Gene Symbol
- lz
- Assembly
- GCA_963082625.1
- Location
- OY720251.1:6728899-6768923[-]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-70 6.4e-66 220.9 0.0 3 129 29 154 27 154 0.96
Sequence Information
- Coding Sequence
- ATGCATCTGCCGTACGAGTCTCGCGGCCGCCGCCGACGGGAGATGGTCGACCTGGAGCCCTGGTGGGTGCAATCCGTCATCGAGGAGACTCTGGCGGAGTACCCTGACTTAGTGCGAACGGGCAGTCCGGACGTGATGTGTTCCCTCCTTCCCCCCCACTGGCGGTCCAACAAGACCCTGCCCGGAGGATTCAAGGTGGTTGCCCTGGGAGAAATCCTGGACGGCACACTAGTCACAGTCAGGGCTGGCAACGACGAGAACTGCTCCGCGGAACTGAGGAACAACTCAGCTGTTATGAAGAATAGGGTGGCCAAGTTCAATGACTTGAGGTTCGTGGGACGAAGTGGGAGAGGTAAAAGTTTCTCACTAACCATCACGATATCAACGAGTCCACCTCAAATCACGACGTACCAAAAAGCCATCAAGGTGACTGTCGACGGGCCCAGGGAGCCGCGGTCCAAAACTAGTACAAACGTCGCTCAACACCAAATAAGATCGTTCGGCTTCCAACGGTCGCTGATAGCGTGCGAGAGCGCATCTCTAGCGCTGCGCGAGATGGACTACAAAACTCCGTCACGAAGTCTGCGCTCGTCGCACGAAGAACGAGAATACAAGACTAATGCCGCCCTGCCTGTTGGAGGTATGTTTACATTAGAACAGTAA
- Protein Sequence
- MHLPYESRGRRRREMVDLEPWWVQSVIEETLAEYPDLVRTGSPDVMCSLLPPHWRSNKTLPGGFKVVALGEILDGTLVTVRAGNDENCSAELRNNSAVMKNRVAKFNDLRFVGRSGRGKSFSLTITISTSPPQITTYQKAIKVTVDGPREPRSKTSTNVAQHQIRSFGFQRSLIACESASLALREMDYKTPSRSLRSSHEEREYKTNAALPVGGMFTLEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00042406;
- 90% Identity
- iTF_00705761; iTF_01182444; iTF_01509356; iTF_01335702; iTF_00700778; iTF_00266958; iTF_01528054; iTF_00119383; iTF_00638428; iTF_01219560; iTF_00737248; iTF_00686115; iTF_00704726; iTF_00909529; iTF_00698047; iTF_00701735; iTF_00696280;
- 80% Identity
- -