Pste010072.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Parochlus steinenii
Gene Symbol
nfxl1
Assembly
None
Location
scaffold56:38805-42510[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.85 5.7e+03 -2.9 2.0 14 19 129 134 129 134 0.86
2 18 2 1.3e+04 -4.6 1.3 4 10 165 171 165 171 0.69
3 18 4.4e-08 0.0003 20.3 16.2 1 19 179 196 179 196 0.99
4 18 1.3 8.7e+03 -3.5 1.8 5 10 221 226 221 226 0.94
5 18 7.2e-05 0.49 10.1 10.8 1 18 232 250 232 251 0.89
6 18 0.36 2.4e+03 -1.7 1.5 5 10 275 280 275 280 0.94
7 18 9.6e-06 0.065 12.9 11.9 1 19 286 304 286 304 0.96
8 18 5.8e-07 0.0039 16.8 11.8 1 18 340 357 340 358 0.98
9 18 2 1.3e+04 -4.9 2.3 5 10 381 386 381 386 0.91
10 18 0.031 2.1e+02 1.7 13.7 1 18 392 409 392 410 0.92
11 18 1.1e-07 0.00075 19.1 10.4 1 19 419 437 419 437 0.92
12 18 0.38 2.5e+03 -1.8 1.9 5 10 465 470 465 470 0.94
13 18 0.055 3.7e+02 0.9 11.5 7 18 481 492 475 493 0.81
14 18 0.0062 42 3.9 7.0 3 12 506 515 505 515 0.89
15 18 1.7 1.1e+04 -3.9 0.5 9 12 567 570 567 570 0.75
16 18 0.00033 2.2 8.0 4.5 1 11 586 596 586 597 0.98
17 18 2 1.3e+04 -6.1 12.2 4 18 627 642 625 643 0.81
18 18 1.1e-06 0.0071 15.9 9.1 1 18 694 714 694 715 0.89

Sequence Information

Coding Sequence
ATGGCAAAAGTGGTGCAAAAAAGTGATTATGTGGATTCTTCAGATGAAGATGACAACTTCAAGGATAATGCCTTGGAAGATGCCTTGGTGTCAGTATTCAAGAACTTCCAAGGCAATAGCATTGATTTAGAGAAGACCAGAGTATTTCTTGATAACTGTTTTCAATCTGGTAACCTGACTTGTTTGATATGTATTCGCACTGTTCGGTCTTCAGATAAGATTTGGTCTTGCACCAACTGTTATTGCTTCTACCATCTGTTGTGCATTCAGAAGTGGGCRAATGAATCAATTCTCCAGAAAAAGTACACCAACGACTCTTCTACTGTTGGATATTACAGTAACACTGGGGAATATATTCCTAAGAAGCAAGAAGCTATTGTTTTTGATTGCCCTCAATGTAGAAAAGTATTTTTGCCCAATGAAATTCCCCGACATTATGAATGTTTTTGTGGCAAAGAAACTRATCCAGAAGTTCATCCATGGCTGGTGCCTCATTCTTGTGGAAACCAGTGCTCTAAATTGYTGATTCCCAATTGTGGTCACAAATGCACGCTTTTGTGTCATCCAGGACCATGTCCAGTGTGCCCACAAACAATTTCCCGATCGTGCAAATGCGCTAAATCACCATTGAAAACCATTCGCTGTTCCCTAAAGGATTGGACTTGTAATAAAAAGTGCCTGGTAAAGCTTTCTTGTAAGATTCATAATTGTGAAGCAATATGTCATCCAAGTTCAGATTGCCCACCCTGCAATAGAACGAGCGTTAAACCTTGTGATTGTGGATCAGCATCTAAAGAAATAAGATGTGAACAGTTAGTCTGGAAATGCCAAAAAATTTGTAACAAAAACTACTCTTGCAATATCCACAAGTGTAAACAACGGTGTCACTCGGATGAYTGTGGGTCGTGCCCTTTAGGGCTTCCRAGATCTTGCAATTGTGGAAAGCAAAAWTCAGTTGCACCTTGCACTGARCTAGAGATAGATTCTTGTGGAGACACCTGTTCTAAGCTTCTWGAATGTGGTATACACTACTGCTCAAAAAGATGTCATAAAGGCGGCTGTGGAGATTGTATTGAATTTGTAATGAAAGARTGCAGATGTGGAACGTTTAAAAAAGAATTTGCGTGCTCAAAAGTTTTTACGTGTGAAACTAAATGCAAAAACAGCAGACTTTGTATGAAACATCCTTGCAGTAAAAAGTGCTGTAAAAATGARTGTGCTCCTTGCGATAAGATTTGCAACAAATTTTTATCTTGTCAAAAGCACAAATGCAAAGCTTTTTGTCATGAAGGAAATTGCTATCCATGTACTTTGAAAACGCAGGTTAAATGTCGTTGTGGTGGAACAACTGTTACAGTTTATTGTGGAAGAGARAAAAAAGGCAAAACTCCWACATGTAAGCAGCCTTGTAGGATAGCTTCAAAGTGTCATCACACTAATCCACATCGTTGTCATGTTGGTGACTGTCCTCTTTGTGTTCAAATGTGTGATCTTCCCAACTCTACAACTAAATGTGAACACAGGTGTGAGGCAAAATGTCATGATTATGTCAAGGTTACTTTCAAGAATAAGAATTTCAAGCCAGCTGGACCTTGGGATGTTCAAGAAGACAAGGTGGAAATGAAAAAGCTACCACATCCTCCTTGCGATCACAAAATTCCTATTGTTTGTATTGGAGGACACGAGACTTCTATGCTTCCATGTCATTCAGCTAAAGCTCTCTCATGTGGAAGACCTTGTGGAAAAAAATTAAAATGTGGAAACCACAACTGTTTGCTAGAATGTCATTATGTAAAAGATCCAGAAAATGAAGATCAAGACGAAAATTGTGAGGATTGCAATCAAGATTGTTCAATAGAGCGCCCTGCCGGTTGTGTTCATCCGTGTTCCAAGCAAAGTTGTCATGTACCTCCTTGCAGAAAATGCATAGTTCCTTTGAAAAATAAGTGTTTCTGTGGACTGATCGATGTACATTATAGATGCTGTGACGTGTACAAAAGAGAGATGGACTCAAACTCCTTAAAAGAGTTAAAGGATAAAAAGATGAGTTGCGGTAACAGATGTATCAAAAATTATCCATGCGGTCATCGGTGCAATTTAATTTGCCATTCTGGAAGTTGTACAAAAGACGTTGATCCTTGTACGAAAAAGGTCAAAGTGTTTTGTGAATGCAAAACCCGTAAAGTTGAAATAACATGCGACAGGGTAAAAACAGAAAAAATTCAAGTGGTTGGTTGTGACGATGCATGCGAAGCCAAGAAAAAGCTCATACAGCTAGAACATGAAGAAAAGGCTTTTCAGCAAAAAATGGAAGTGGAAAAAAGAAACAAAAAGGAACTTGAGGAGTTTGAACAAAAGTTTGGCAAGAAAAAGTTCAAGGAGCGGAAACAACGTTACGTAGAAGAAGAAAAAAGTAACAATGGTCTAATAATATTTGCAGCATTTAGTGGAATTATTAAATATATTTGA
Protein Sequence
MAKVVQKSDYVDSSDEDDNFKDNALEDALVSVFKNFQGNSIDLEKTRVFLDNCFQSGNLTCLICIRTVRSSDKIWSCTNCYCFYHLLCIQKWANESILQKKYTNDSSTVGYYSNTGEYIPKKQEAIVFDCPQCRKVFLPNEIPRHYECFCGKETXPEVHPWLVPHSCGNQCSKLLIPNCGHKCTLLCHPGPCPVCPQTISRSCKCAKSPLKTIRCSLKDWTCNKKCLVKLSCKIHNCEAICHPSSDCPPCNRTSVKPCDCGSASKEIRCEQLVWKCQKICNKNYSCNIHKCKQRCHSDDCGSCPLGLPRSCNCGKQXSVAPCTELEIDSCGDTCSKLLECGIHYCSKRCHKGGCGDCIEFVMKECRCGTFKKEFACSKVFTCETKCKNSRLCMKHPCSKKCCKNECAPCDKICNKFLSCQKHKCKAFCHEGNCYPCTLKTQVKCRCGGTTVTVYCGREKKGKTPTCKQPCRIASKCHHTNPHRCHVGDCPLCVQMCDLPNSTTKCEHRCEAKCHDYVKVTFKNKNFKPAGPWDVQEDKVEMKKLPHPPCDHKIPIVCIGGHETSMLPCHSAKALSCGRPCGKKLKCGNHNCLLECHYVKDPENEDQDENCEDCNQDCSIERPAGCVHPCSKQSCHVPPCRKCIVPLKNKCFCGLIDVHYRCCDVYKREMDSNSLKELKDKKMSCGNRCIKNYPCGHRCNLICHSGSCTKDVDPCTKKVKVFCECKTRKVEITCDRVKTEKIQVVGCDDACEAKKKLIQLEHEEKAFQQKMEVEKRNKKELEEFEQKFGKKKFKERKQRYVEEEKSNNGLIIFAAFSGIIKYI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-