Pste002587.1
Basic Information
- Insect
- Parochlus steinenii
- Gene Symbol
- zfh2
- Assembly
- None
- Location
- scaffold29:138917-150461[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00019 0.0076 16.3 1.4 2 23 414 436 413 436 0.96 2 11 4.7e-05 0.0019 18.2 0.7 1 23 468 492 468 492 0.92 3 11 0.015 0.6 10.3 0.4 1 22 568 589 568 592 0.91 4 11 3.3 1.3e+02 2.9 0.1 3 23 871 893 870 893 0.93 5 11 0.072 2.9 8.2 0.4 2 20 973 991 972 995 0.92 6 11 0.0035 0.14 12.3 0.2 1 23 1049 1071 1049 1071 0.96 7 11 4.5e-06 0.00018 21.4 0.2 2 23 1078 1100 1077 1100 0.94 8 11 0.017 0.67 10.1 0.6 1 22 1161 1182 1161 1185 0.89 9 11 0.017 0.67 10.1 0.1 1 23 1235 1259 1235 1259 0.93 10 11 0.00021 0.0085 16.1 2.9 1 23 1862 1884 1862 1884 0.98 11 11 0.003 0.12 12.5 0.2 2 23 2159 2181 2158 2181 0.92
Sequence Information
- Coding Sequence
- ATGAGAGAAATAAAATTAGTTTGGTGGTTTTTGTGGCTTTTATGCGGAATCTTCAAGAGAGGCAGGGGAAATTATTTAAGAAAAAAAAATTTGAATGTGCCACTGACGGTAGCCGCCACGGAGTCGATTCAGCTGGAGGGCCGGGCTGGGAGTGCTGCCCAGCTCCATGTGGCGCCCTCTTCACCGCCTGCCGTCACCTTCCAGCAGAATCTGTTGCTGCAAACGCACACACTGCTCAAGCACCAGCAGATGGCGCCCCCAGCACCCGACTCACCCACTCAGGAGCCAGCGCCCAGAAAGCGTCGCCGTAAGCGTGACGATCCCCAGAATTGTCTCACGAACTCAGAGGAATATTCAAAAAAAGGGGAATACGACTCAGACGATACTGCGCCGGGCTCAACGTCAGACGTAGAACGATTTCAGGGTAAAATAGTGTATAACCAGGACGGCAGCGCGTTCATAATAGACTCAGAGAATGAGTCTACCTCGCACCTATCCGAGTTGGGTAATCTAAAGAGTGGCTCTGTGCCCTCAAACCCTCGCATTCATTCATTCCGGGTAATTTCCTCAATGGACGCAACTTGTCTGCCTTCTGACTCGACTCCTCCACCACCTTTACCACAGAAGCCCATTCTCATGTGTTTCTGCTGCAAGCTGAGCTTCGGCCACACCAAGTCGTTCCAGCTTCATGCGTCCGCTGAGCATGCGCTATGCGCCACCCAAGCCGAATTACAACTTCTGTCGCGTGAATACTCATCCGCCATTATTCAGCGATGTGCTGACGAAAAGCCACAAATTTCCTTTCTGGAGCCACTCACTGGCCAGGAAGTGGAAGAAGAGCCACCTAGGCAGCAGCTTGTACCAAGACCTTTGGCTAGTTTGACTGGAAATGATCTCACACCTAGAATGCATCAACAGTCGCCCCGCCCAATCGCCAACCAAACTGGCAACGACCTCACCACCCAATTGCATCATCAGTCACCCCGCGCCGACCTCGATTGCCCCTCGTCACCCACCACCATCCTAAACTCTTCACCCTCTTCCTCATCAACATCGTCGCCCCTCATTCACCAACAGGTGGCATTGCACACTTCTCCCTCGTTTACAATTGGCGCTTGCCCTGATCACATGAATGGACGACCCCTCGGTGTTGATTGCAATCGTTGTGAAATTCTTTTAAATTCGGCACGACTAAACAGTGGCGCCGCCATGAGTACGCGCAATTCTTGCAAAACGCTCAAATGTCCGCAATGTAATTGGCATTACAAATATCAGGAGACACTTGAGATTCATATGCGTGAAAAGCATCCAGAAGGTGAGAGTGCTTGTGGATATTGTTTAGCAGGACAACAGCATCCGAGGCTAGCGAGAGGTGAATCTTACACTTGCGGATATAAACCGTATAGATGTGAAATTTGTAACTATTCAACTACCACGAAGGGAAATCTTTCCATTCATATGCAAAGTGACAAACATTTGAATAATATGCAAGAGTTGAGTTCATCACAACAGCTGGGCGGTGGCCAAGTGCAAAGCAACGACATGCGAGCCTCCCCACAAATCTCACAAATCTCTCAAATCCAACAAATCTCACAAATCCAACAAATCCCTCAAATTCAAACGGCACCACCACCCACTCCGCCCGCTCAACAAACTGCTCAACCAGCTCAGCCAGCTGGCGCGCAGAAACCAAAGCCAAACTTCCGTTGTGACGTGTGCTCATACGAGACAAGTGTGGCACGTAATTTACGCATTCACATGACTAGTGAGAAGCACACACACAACATGGCTGTGCTACAAAATAATATCAAACATTTGCAAGCGCTCACATTCCTACAAAGCCAACATTTGGCACCTCAAGCTGCTGGTGCTCCTGAAGCGGCTCTTGCTGATTTGGCATACAATCAAGCACTCATGATTCAACTACTTCATTCCGGTCATACTGGTAGTGGTACAACAGCTAATCAACTACATTCTGGTGCAGCGTCACCACAACAACCCACCGATCCTGATCCAGGCTTGTGTCCCGATACACTTGAACCACCAGCTGATTTGGAAAGGACTCCACCCTCTTTGTTCAGTTGCTTGATTTGTGCAGCATTTGATACTAATTCGCTGGACGATTTAAATGCTCACGTAATGGCAGATCGAGCGAGAGGAGGAGCAGCCGCTGATCATATGCTGTGCGTTAATCAGAGTTACTTCCGTTTTTCAACTTCCAATCCATCCTCTAGCTACAAAACCAACCTCAAAGCAAACTTCCAACTGCACAGCAAAACTGACAAGCACTTGCAACGTCTTTGCCTGGTAAATCACATTGGTGAAGGTGGACGACGTTCAGCTCATAAATTAGCACACGTGGCTGCTGCAGCAGCTGGTGCCAATCATAACTATCATGCGGTGCAGTTGCGTTGCAATTGCTGTGACTGGTACACAAATAGTATTCAGAAGCTCAGTGTTCATGCACAGCTGAGGAGGCACGACAATATGCAGCTGGTATATCAGCATGTGCTCAGATTGAGTGGAGAACTCAACCAGCTCCATGGTGGCGCCACCATCGCCATCAAACAGGAGAACGGTGAATCTGCTGCCCCTCAAAAAGTGCTGCTCTGTCAGTTGTGCAACTACAAGGCGAGTACGCCATTAGCCATCATTAGACATATTAAGACACCTAGACATACCCAGATTGAGCAGATTTACTGCTTACAAAGACGTTGCGAGAATATTGACACTTTCGAACTAGCTGACATCATTCAGTGTGTGGAAGAGCCAGATATACCGGAAATTGCTGAACCGGAAGCTCCAGAACAACCGGAGAACAATAGTGGAGTAGATTCAGATCTAGAGATGATGGAGATGACAGTAGAACCAGATATTTTGGGAGTGATGATGTCTGGATCAACTGAGTCCGGTTCTATGTGTCCTCTATGCCAGGAAACATTCCAGACTCGTCCAGCATTAGAGCAACACGTCATGTGTGTTCATAGTGTCAACGCAGATGGACTGAATCGACTTCTTCAGCTCTGTGATCAATCTCAATGGATGAGTAGACCTGAACCTCCACCAGCGCCACCAGAGCAAAGATCTGGACACAGGAATCAAAATCAACAAAATCAAGTAATCTCCGAACGTCACGTTTACAAGTTCAGATGTGCTCTTTGCTCACTGGCCTTCAAAACGCAAGACAAACTCGCAGCTCACGCTCTTTATCATCAGATGCGTGATGCAACTAAATGCAGCATTTGTGGGCGAAGCTTCCGTAGTGCCGCCTCTTTGTTACGTCATATGAGTGAAGCTCATGGAGCAGACGTCAAGTCAGATGAAGATAGAAGTAGTGCGTGCAGTGGTGGAGCCACTGATGAGATGGAAGAGGAAGAGTTCCAGAATTTGAGCGGCGGTGATTTTACTGGCCATAGAAAAAGTGTATCTGGTCCTGGATCAGCTGGAGCTCCGGAAAAATATCTGGACCCAGCCAGACCCTTCAAATGTGACATTTGTCGTGAGAGTTTCACTCAGAAAAATATTCTACTGGTCCATTATAACAGTGTCAGTCATTTGCATCGCTTGAAGAAATTGGACGCCAGTCCACCAGCTCCAGTGACAGCTGTTACTCCTCCTGTGGACTACGATGCTGAAATAGTTCCTGTAGGTGAGAAACGAAAACTTTCCAGTGACGCTGACTACGATTCTCCTCGTAAACGCTTCAAATGTGACATTTGCCGTGTGGCTTACGCACAAGGATCCACTTTAGACATTCACATGCGTAGCGTTCTCCATCAAACCCGCGCTTGTCGTCAAGAACAGCAAAAAGTAGGTGGAGCCACTCCTGAGCAGCAAAATGGACAAGGTCAAGGTCAAGTGAGTGCAGCTAATAGTCAGAACAGTCAAATGTACAAGCAACTGCTAGAGAACTTTGGTTTTGACATTGTGAGGCAGTTCAATGAGAACGGAGGGGCTGGACTACTTTCGCAGCCTCCTTCAGCTGGACAACCTCCAGGAACTGAAGAAATTCCAGCGGATTTATTAGAAAGATTTGCTGCTCAGTTCAAGCATTACTTGGAGAAAGAAGGTGCAGAGAGTGGACCTGGAGAAGCTCTAGACTTCACCACAAAACGCGAAGCTCCAGTTCCAGTGGAAGATCCCGCACTTCTTGCCCAACGTCTAATGGAGCAACAATTCCTTCAACAATTCCCTCAAATCGCTCAAAGTCTTCAACAATTGGGTGGAGGAGGAGCTCAGGGAGGTGGTGGTTCCTTAAACACCTTGGACATGCTCAACTTGGTTCAATTTCATCATCTGATGTCACTCAACTTCATGAACTTGGCTCCACCATTGATTTTTGGTCAAAATCAAACGAACAATACAGTGGCGACGGGACCTCAGCAAAGTGGTGCTACAGCCGCAGCGGCTCAGCAACAGCAACAGCAACAGCAGCAGCAACAACAGCAACAACAACAGCAGCAAGCCAGCAATGCCCAGCAGAATAATCAGAACAATCAGTCTTGCAACAACCAGAAAAGAGCTCGAACTCGCATCACAGATGAACAGTTAAAGATCTTACGCTCACATTTTGACATAAATAACTCGCCTAGCGAAGAAAGTATCCTTGAGATGTCAAAAAAGGCAAATTTGCCTCAAAAGGTGGTCAAACACTGGTTCCGCAACACCTTGTTCAAAGAACGTCAACGCAACAAAGATTCGCCCTACAACTTCAACAATCCCCCCTCTACCACCCTCAATTTGGAGGAGTACGAGCGTACTGGACAAACAAACGTGACCACTGTGGAGAATAATAGTTGCCCCACCCCCATTCGTCCACCTTCTGATACTAATTTCCTGCATTTTTCGCGACCACGCCCACAAGCGCAGACTGACGTACCGGCAGCATTTAATTTTGCTACGGTCGCCACGCCTCCGCCTACACCGCAAATGACACCGCAGATGACAGCACAGATGACAGATGTCATGGAGATTATGCATCAGAGGAGACCAGAACTAATTGAGACCCCTGAATTCATCAGCAGTCGTCCCCCAAGTGCGGACCACATCAAAGCTGAGCCCCCAGAGGAGTTTGATCTAAGGGCCCAAGCCCCGCCCCTCTACTTTGCCGCCTTTGACGGTAAATCCGAGTCGGGTAGTTCAGGAGGTGGAGTATCTAGACCCCACACCCCTTTATACGCACTAGGCGAACTATTAGGTCCACAAGGAGCAGGACAAGGTCAAGGTCAAGGTCAAATGGGTCCCAATCAAATGGGACCACCCAAAAAGTTGAATCTCCATAAATTGTTTGACAAGAGCTACGAGAGCAATTCAAACAGCTCAAATTCGTCAGCTGGGAGTGGCAAGAGAGCCAATAGGACTCGCTTCACAGACTATCAGATAAAGGTTCTACAAGAGTTCTTCGAGAACAATTCCTATCCTAAAGACAGCGATCTAGAGTACCTTAGTAAACTCCTCCTACTTTCTCCAAGAGTCATTGTCGTCTGGTTCCAGAACGCTCGCCAAAAGCAGCGCAAAATCTACGAGAATCAGCCAAACAATGCACTCTACGAGTCGGAGGAGAAGAAGGCGAGCGCCATCAATTACACGTGCAAAAAGTGCCAGCTGGTGTTCCAACGCTACTACGAGTTGATCCGGCACCAGAAGAATCACTGTTTTAAGGAGGAAAACAACAAAAAGTCTGCCAAGGCGCAAATAGCGGCCGCCACCATTGCCGCGTCCCTCAGCTCTGAGGACAGCAACAGCAGCTTGGACATTCGTCCTCCACATCTAGGTAATAACCTGCCGGCCCCTCTGCCGCCGCCACCTTTGCCCCCCGTCTTTACATCTGGTACGCCCACCGATATGCCGCCTCGTCCGGATTCCCAGCCACCTCGGCCGAACTTTGAGGGAGCTGCGGGCACTCTCACCCAGTCCCAACATGCCACTCTTATCAATACGGCCCTGATGTCTTCCCTCAAGCGTCCCGAACATCTGCCCGCCCATTTTTTACTGCCCAGCTTCCGGGCGCCAGCCCCTGAGCCGCCCACTCCGCCCAAAGATGTACAGGGTGACTTTTTTCTGAACTATTGGCGCGCACGCACTCAAGATCAGCCACAAGATCAGGCTCCACCAACTCTCGACTTTTTAATTCAATTTTATCAGTTACGCGAGTTTGAGCAGAAAATGAGGGCGGCCGCCAATTTGACATGTGTTATTGAGGATGAACCAACAGAGCCAGTAGCTAACGGTCTAGATAAAAGTGCTAGTAGCAGCTGCCACAGCAACAAGAGGCTTCGCACAACAATCCTCCCAGAGCAATTGAACTTCCTTTATGAATGCTACCAAACCGAGTCAAACCCTAGCCGCAAGATGCTTGAAGAAATAGCCAAGAAAGTGCAGCTCAAAAAACGAGTCGTTCAAGTTTGGTATCAAAACTCTCGTGCCCGTGAACGTAAGGGTCAATTTCGTCAGAACATGCAAATAATCCACAAGCGTTGCCCATACTGCAGCGCCATTTTCAAAGTGAAGTCAGCCCTGGAGGCTCATTTGACTGCAAAGCATGCTGATCAACCAGCTGCCAATATAGACGCTATTCCAGAGATAAAAGCGGTTGCTCCAGCCGCCACGGCTGACGCATGGCCGCCATTTTCTGGATATTATCAACCGCCAGTAGCGCCGGCCGCTAGTGACAGTGAAGTCAGCTTTACAGACAGCAATGGCGATGAAGACGATGACATCGAGTATTACAATGATGAGGATAATCAGCCAACTGGTACAGCTGAAGCACAGCCGACGCATAAACGTCATCGCACTCATATGTCACCTAGACAGAAGAGTGTTCTGAGGAGGCTTTTTGCAGACGTCAAGACACCCTCCATGCATGATTGTGAGGCTGTTGGGAGGCAGTTGCAGCTCACCAAACGAGTAGTTCAGGTCTGGTTCCAAAACGCTCGAGCCAACTGGAAAAAGTACCACAAGGCATCTCCTGAGGATTTAACGACCACAGCCACTTCCGGTCCATTGCTCGATTGCAAATACTGTCAAGTTCCACCGACCACTGCCAAGTACTATCAACAACACGTGTTCTCTGCTCAGCATTTGCAGCAGGTGGCAGCATTTGTGGGCGGAGCCCCAGAAGAAGAGGGCGGAGCTTCAGAAGATGAAGATGATTTAATTAACAGTGGCGACGAAGAGCCAGATTATTGGAGTGGACAGTATGGCGGGGCGGAGTTTGAGTACTCGACCACGCCCACTACTATAAAGTCCTCCATTCTGGTGGAGCAACAACAACAGGTGCAGCCTCAGGCTAATGGTGCCGCCCCCTATCAAAACATTGAACATTTGATGCACCAACAGTACAATTTCAACCAGATGAGAGAGTATTGTGTTGTTAGATGGCGCTGCGTGAAAGTGACTAGTGGGCGGGGCTGGATTCTGAACGTGGTGACGGGTGGCCACGCCCCCTTCCCTTGTATTTTTGTTTTCAAATTTGACATTTGTCAAAAAATCCTCCATTTTTCTAAACCTCGACCATTTACTTACAGTGCTGAGCGGCAAATGAGCCCATTGGAGCTGGGCAGATGCATTCGGGATGCAACTGGGCAGCGAACAACACAATCTACACGTGGACAATTGAAACTTAAGAATTTCAAGAAAATCCAAAGAAATGAAGGCAAAACAAATTGA
- Protein Sequence
- MREIKLVWWFLWLLCGIFKRGRGNYLRKKNLNVPLTVAATESIQLEGRAGSAAQLHVAPSSPPAVTFQQNLLLQTHTLLKHQQMAPPAPDSPTQEPAPRKRRRKRDDPQNCLTNSEEYSKKGEYDSDDTAPGSTSDVERFQGKIVYNQDGSAFIIDSENESTSHLSELGNLKSGSVPSNPRIHSFRVISSMDATCLPSDSTPPPPLPQKPILMCFCCKLSFGHTKSFQLHASAEHALCATQAELQLLSREYSSAIIQRCADEKPQISFLEPLTGQEVEEEPPRQQLVPRPLASLTGNDLTPRMHQQSPRPIANQTGNDLTTQLHHQSPRADLDCPSSPTTILNSSPSSSSTSSPLIHQQVALHTSPSFTIGACPDHMNGRPLGVDCNRCEILLNSARLNSGAAMSTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPEGESACGYCLAGQQHPRLARGESYTCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELSSSQQLGGGQVQSNDMRASPQISQISQIQQISQIQQIPQIQTAPPPTPPAQQTAQPAQPAGAQKPKPNFRCDVCSYETSVARNLRIHMTSEKHTHNMAVLQNNIKHLQALTFLQSQHLAPQAAGAPEAALADLAYNQALMIQLLHSGHTGSGTTANQLHSGAASPQQPTDPDPGLCPDTLEPPADLERTPPSLFSCLICAAFDTNSLDDLNAHVMADRARGGAAADHMLCVNQSYFRFSTSNPSSSYKTNLKANFQLHSKTDKHLQRLCLVNHIGEGGRRSAHKLAHVAAAAAGANHNYHAVQLRCNCCDWYTNSIQKLSVHAQLRRHDNMQLVYQHVLRLSGELNQLHGGATIAIKQENGESAAPQKVLLCQLCNYKASTPLAIIRHIKTPRHTQIEQIYCLQRRCENIDTFELADIIQCVEEPDIPEIAEPEAPEQPENNSGVDSDLEMMEMTVEPDILGVMMSGSTESGSMCPLCQETFQTRPALEQHVMCVHSVNADGLNRLLQLCDQSQWMSRPEPPPAPPEQRSGHRNQNQQNQVISERHVYKFRCALCSLAFKTQDKLAAHALYHQMRDATKCSICGRSFRSAASLLRHMSEAHGADVKSDEDRSSACSGGATDEMEEEEFQNLSGGDFTGHRKSVSGPGSAGAPEKYLDPARPFKCDICRESFTQKNILLVHYNSVSHLHRLKKLDASPPAPVTAVTPPVDYDAEIVPVGEKRKLSSDADYDSPRKRFKCDICRVAYAQGSTLDIHMRSVLHQTRACRQEQQKVGGATPEQQNGQGQGQVSAANSQNSQMYKQLLENFGFDIVRQFNENGGAGLLSQPPSAGQPPGTEEIPADLLERFAAQFKHYLEKEGAESGPGEALDFTTKREAPVPVEDPALLAQRLMEQQFLQQFPQIAQSLQQLGGGGAQGGGGSLNTLDMLNLVQFHHLMSLNFMNLAPPLIFGQNQTNNTVATGPQQSGATAAAAQQQQQQQQQQQQQQQQQQASNAQQNNQNNQSCNNQKRARTRITDEQLKILRSHFDINNSPSEESILEMSKKANLPQKVVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQTNVTTVENNSCPTPIRPPSDTNFLHFSRPRPQAQTDVPAAFNFATVATPPPTPQMTPQMTAQMTDVMEIMHQRRPELIETPEFISSRPPSADHIKAEPPEEFDLRAQAPPLYFAAFDGKSESGSSGGGVSRPHTPLYALGELLGPQGAGQGQGQGQMGPNQMGPPKKLNLHKLFDKSYESNSNSSNSSAGSGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWFQNARQKQRKIYENQPNNALYESEEKKASAINYTCKKCQLVFQRYYELIRHQKNHCFKEENNKKSAKAQIAAATIAASLSSEDSNSSLDIRPPHLGNNLPAPLPPPPLPPVFTSGTPTDMPPRPDSQPPRPNFEGAAGTLTQSQHATLINTALMSSLKRPEHLPAHFLLPSFRAPAPEPPTPPKDVQGDFFLNYWRARTQDQPQDQAPPTLDFLIQFYQLREFEQKMRAAANLTCVIEDEPTEPVANGLDKSASSSCHSNKRLRTTILPEQLNFLYECYQTESNPSRKMLEEIAKKVQLKKRVVQVWYQNSRARERKGQFRQNMQIIHKRCPYCSAIFKVKSALEAHLTAKHADQPAANIDAIPEIKAVAPAATADAWPPFSGYYQPPVAPAASDSEVSFTDSNGDEDDDIEYYNDEDNQPTGTAEAQPTHKRHRTHMSPRQKSVLRRLFADVKTPSMHDCEAVGRQLQLTKRVVQVWFQNARANWKKYHKASPEDLTTTATSGPLLDCKYCQVPPTTAKYYQQHVFSAQHLQQVAAFVGGAPEEEGGASEDEDDLINSGDEEPDYWSGQYGGAEFEYSTTPTTIKSSILVEQQQQVQPQANGAAPYQNIEHLMHQQYNFNQMREYCVVRWRCVKVTSGRGWILNVVTGGHAPFPCIFVFKFDICQKILHFSKPRPFTYSAERQMSPLELGRCIRDATGQRTTQSTRGQLKLKNFKKIQRNEGKTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01160299;
- 90% Identity
- iTF_01160299;
- 80% Identity
- iTF_01160299;