Basic Information

Insect: Parochlus steinenii
Gene Symbol: Rreb1
Assembly: None
Location: scaffold652:19192-25738[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.032 1.3 9.3 0.8 1 23 161 183 161 183 0.98

2 15 0.00038 0.015 15.3 0.2 1 23 196 218 196 218 0.98

3 15 1.2e-05 0.00049 20.0 7.7 1 23 224 246 224 246 0.99

4 15 2.3 92 3.4 0.4 1 23 318 342 318 342 0.88

5 15 0.095 3.8 7.8 3.4 2 20 348 366 348 368 0.94

6 15 0.46 18 5.6 0.1 1 21 413 433 413 434 0.90

7 15 0.049 2 8.7 0.2 1 23 574 596 574 596 0.97

8 15 1.5e-05 0.0006 19.7 0.8 1 23 605 627 605 627 0.99

9 15 0.00053 0.021 14.9 2.0 1 23 633 656 633 656 0.97

10 15 0.0011 0.043 13.9 2.1 1 23 986 1009 986 1009 0.95

11 15 0.0001 0.0042 17.1 0.4 2 23 1288 1309 1287 1309 0.97

12 15 0.12 4.7 7.5 4.2 1 23 1315 1338 1315 1338 0.96

13 15 1.4 57 4.1 3.0 1 23 1434 1457 1434 1457 0.91

14 15 0.014 0.54 10.4 0.6 3 23 1511 1531 1509 1531 0.95

15 15 0.075 3 8.1 5.6 1 23 1537 1559 1537 1559 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.032	1.3	9.3	0.8	1	23	161	183	161	183	0.98
2	15	0.00038	0.015	15.3	0.2	1	23	196	218	196	218	0.98
3	15	1.2e-05	0.00049	20.0	7.7	1	23	224	246	224	246	0.99
4	15	2.3	92	3.4	0.4	1	23	318	342	318	342	0.88
5	15	0.095	3.8	7.8	3.4	2	20	348	366	348	368	0.94
6	15	0.46	18	5.6	0.1	1	21	413	433	413	434	0.90
7	15	0.049	2	8.7	0.2	1	23	574	596	574	596	0.97
8	15	1.5e-05	0.0006	19.7	0.8	1	23	605	627	605	627	0.99
9	15	0.00053	0.021	14.9	2.0	1	23	633	656	633	656	0.97
10	15	0.0011	0.043	13.9	2.1	1	23	986	1009	986	1009	0.95
11	15	0.0001	0.0042	17.1	0.4	2	23	1288	1309	1287	1309	0.97
12	15	0.12	4.7	7.5	4.2	1	23	1315	1338	1315	1338	0.96
13	15	1.4	57	4.1	3.0	1	23	1434	1457	1434	1457	0.91
14	15	0.014	0.54	10.4	0.6	3	23	1511	1531	1509	1531	0.95
15	15	0.075	3	8.1	5.6	1	23	1537	1559	1537	1559	0.99

Sequence Information

Coding Sequence: ATGCCTGTTGATATGCATATATCTTATCAGTTTTTTGATAAAAATTTATTTATCTTTTCAGAACCCAAAGCAATGGAACGTCGCAACTCAACTAACTCTGAATCTTCCATCGAACCCATGGAAGTAAGTTCCTCTAACAAAACAGTCAGCTCTGATGCCAACTCTTCGCTGGCAATAAAAACCAGCCACGAAAGTGATAATGTAGAGTCAGACGAGAACGAAGACTATCTGAATAACAATCGATGCAATAACGAGCAGCTCAACGATACCAAAACTAGCTTAGACTCAAACTTTGTTCGCAGAGATAATCTACGGCAGCTTATGGATAAAATGCTGCAGAAAAAGATTCTCACTGCAGCTCAGAATAATAATAATAACAGTTCTGAGGAGAATCTGAATAGCTCGAACATGGATTTGGTAGAAAACTCCCATTCAGACAACGAGCACAAAAATAGCGCCACCATTAATGATGGTACTAAGTATGTGTGTCCYATATGTGAAACAATATCTTTAACTCAACACGAGTTCACCACCCACATTCGCAACCATAATAATATACGAGATGCCTCAGATGATTCGACGACATTTACTTGCCGCATTTGCTCCAAAGTTTTATCTTCAGCATCTTCACTTGACAGACATGTTCTTGTCCATACAGGTGAACGTCCATTCACCTGCAAATACTGCCATCTGACCTTCACTACAAATGGAAATATGCATAGACATATGAGAACTCACAAACAACATGATCAGTATGAAAGTGATGCAAGCACTGATTCGAGTGGAGGGTCAAGCGAAGCTGCAAGAAGAAATAATTTGCTCTCAGGAATTGGAAGCTTTCCTCATAAACGAAAAAGTACTGAAGAAGACATGCTTGCCAGCCACAAGCGAAAAGTGAACCGCCATGTGAACCACAACAACAATAATTTAATATCATTGAACCAGCAAAAGTTTTGCTGTCCGGTGTGTGAGCGAAATGATTTCCCAAGTATGATAAATCTAGAAAGCCATATGGACAAAGAGCATCCTACAATTCCCGCCAAATGCAGACACTGCGAAGTTGTCTTTAAAAGCCACAAGGCTTTAAATGCTCATCGTTGTGGCAATCCGCAATCTGTCAACATTATGCAAGGCTTCAAAGATCTCACATTTGTAGACTTCTCGAGTGAAAAGTTTCCCATCATTGCCAAATCAATGTGTGAGCAAAGTATTCGAACACCCATCAGTAGCCAAAAATTTGAGTGCCCAAAGTGTTATCGAGCTTTTCCYTGCGCATCTGCAGTAGAAATTCATATCAAGGACTGCTTGAATGAGTTTGTTGTAAAYAGAAAGCGACAGATGAGTGAAACTTCTGAGGAAGATGCCAAGCGAGATGACTTTTTTGCTAATTTATCACTGCAAAACCGCTCTCTACCTACCTCTGAAGCTCCATCAACTCCCACTTCTCATGCTGATAAGAGTAGCTTTTCATCTCCTTCTATGATTATGCTACGAGATATCAAACAAGAAATGAGGAGCACTCCACCATCTTTCTATCATCAATATTTCGGAGAAGGTGGTCGTGATTTTGCTGACATCGAATCCATGATCAAGGCCACCTCTTCTGGAGGACTTGATAGACCAGTTCCTGAGAAAGATCAACATATTTACAACAAAGACGAAGAGGAAGCTCAAGATGCCTTCACATCAGAGTTTAGAAAAATGAAGATGCGTGGAGAATTCCCTTGCAGACTTTGCACTATGATTTTCCCAAATTTGCGAGCACTTAAAGGACATAACCGAGTTCATTTAAGCGCAGCTGGTCCAGGACCTTACCGATGCAACATGTGTCCTCACTCTATAAATGACAAAGCAGCTTTGATTCGGCACATGCGAACTCATAATGGTGATAGACCTTATGAATGTGCCATCTGCAACTATGCATTTACTACAAAAGCTAACTGCGAGCGCCATCTTCGTAACCGACATGGAAAATCAACACGAGATGACGTCAAGAAATCCATTATCTATCATCCATCTGAAGATTCTTCTGTTGATGATCACTCTAAGAAAATTCAGATGTTCAATTCACCCGAGTTTGATGACCACGATGGCCTTCCTAAAGACAGAAGCAGTACACCAGTCTCGCATTTGAAAGAGATGTTGGGTGGCGATCGACAGCAGTCGAAGATCCAAGTTAAAAGCATGGACAAATTAAAATCATTCAATAGGAATTTCGACAATGACATTGAAGAGGAAACTCACCTTGAGACAAGACCAATGGACCTTAGCATGGATGCTCTAGACTTAAGTAAAAAAACAAACAGTTATTCAGTTGACGCTGATGAAGAAGATGATTTAGAATCAGATTTGGATGACGATCAGCCTGAMCATGAACAAGAAGCTGAAATTCCCAAGTTCGATTTATTCGACAAAAATCCTCATTTGATGTTTATGCAACAACAGCTCTTGAATGAATCTATGCCCAAATTGGACCCTGCTCAATTTTTTCAGCTAGCACAAATGTATCGTACTTTTGGGTTTCCTACGCCTGGTTTCCCAATTCATCCTGGCTTGCTGATGCAAAACCCATTGCTAGCATCAACCGCATTAAATGATATGAAAAACTTTTTCCAAAAAGATATGATGCCATCAACCCCACAACCTCCTCAAATGTCTGGTGGTAGTCTGATTGTCAACCCTTTTGTTTCTCCAGACTCATCACCTACTGGCCCTCCTCCAGTGCAGACCACCAGTTTACAACAACAATCTCCGGTTCCAAGCAACCAAATTCAAATTCAACCATTCCCTTTGACGCCACAAGAATCACCCAARAAAACAGCAACACCAATCCAGCAAACACCCTTAACTCCTCAGCATCAAAACATGAACCATACTGGACCAGTGAAGATGGTTATTAAAAATGGAGTGCTAATGCCTAAACAAAAGCAACGTCGTTACCGTACTGAAAGACCTTTTGCATGTGAACATTGCTCGGCTCGATTTACGCTMCGCTCAAATATGGAGCGTCATATCAAGCAGCAGCATCCTCAGTTTTGGGCTCAAAGACAACGTGGTAGCCACAACTTGATGCGAAGAACTCCTTCAATACCGTCAATTAACCAACCTATGATGCCYAGTAGTATGCAAAGCATGCAAGGAATGCAAAACAGTTTTGGTGTAGGTATTTCAGAACAAGTMAAATATGCAATTTTGGCACAACAGCTTAAAGCTCGAGAAAGTCCCAAAAACTTRATACCTCAGCAATTTCAAATGAGCTTGCCTCAAAGCCTACAGCCACAAATTCAAATGCATATTAAAGAAGAACCAAATCTAGAAATGAGCCCTAAAAGTAGCACTCCAATGCCAGATGATGATGAGCCAAAGCTGGTAATCGATGAAGAATATCAAGCTGAAGATTTAAGCAAATCKTCTGATTCTGTTCCAGCTGCAACAGTTGGTCAGAACAATTTGGCGGCTAGAAAAATTGCAGAAAATATTCTGGAACAAGCCATAAAAATGAGTTATGAAACTCAAACTAAAAGTTTATCTTACAATGGGGAGATGAAAGATTTTGAAGCAAAGARAGTYAATCATGATACAGATGTAAGAGAGAGTTTACCTTTTGTCCAAACTATGAAGGAAGAAGGAAATGACTTGGTGTCGGTTTCCAGATTGGTCGATAATGCTACAAATGCCATGATGTTCAGCAATTACTTCAGTCGACCCGAACCACCAATCATGGATCTGAGTGATGAAGAAGGTCTCGTTGCTCCAGGTAGTGCTTCAGATAGCAATAATTCTGGTACAGATGAACCCAATACTTCCAGCTTATCTAGCGAGAAGAAAAAATCAGCATACAGTTTGGCACCAAATCGAGTTTCATGTCCATATTGCCAGCGTAAATTTCCGTGGTCCAGCTCTTTGCGACGTCATATCTTGACTCATACTGGACAAAAACCTTTTAAGTGCTCACAATGTCCATTGCTTTTCACTACCAAAAGCAATTGCGATCGTCATCTTTTACGCAAACATGGCAACATTGAATCAGCGATGTCATTGCAAGTACCAATTGATGAAATGCCTGAGCCTGTTAAAGAACCTGTTCAAAAGCCAACAGTCCAGCCAGCAGCTCCACCTACCAAAGATGACAACGAACATGTCTCAAAGCTGACGATGAGCATTCCATCGTTCAACATTCCAATGCAGCAAGTCTCGCAGGTTGCACCAAATGCTCAAATAAAAGTAGAGAATAATTTACCATCCACCTTGAACAGCCTGTCTTGTGCTACAAACACTACCACTTCGAGTGATCTGCCATTCAAGTGCCATTTGTGTGATGGATCTTTTTCTGAGCGTGTAACTTGCTTGGAGCATATCAAACAAATTCATTCAGCAGATTTCGCCATTTTAATGGCTAAAGTTACTTTAGAAACAGACCCTGAAGTTATGGCATCACCAGATGATGAAGATGGGAGCTTGGGAATGGGGAATAATGCAGTTTTTGATAACAAAGGCAAATATCCAGACTATGCCAATCGTAAAGTCATCTGTGCTTTTTGTTTGCGACGTTTCTGGTCCACCGAAGATTTGAGACGCCATATGAGAACCCACAGTGGAGAACGACCATTTCAATGCGACATTTGCATGCGCAAGTTTACCTTGAAACATAGCATGCTTCGTCATCGCAAGAAGCATAGTGGGTTGCAGCATATGCATCATCTTGGAGGTCAAAATATACATTCACCTGGACAAGATGGGAATGGTGGATCAGGATTGCATAGCATGCTTACCAATGCTCACAGTGCTTCTGATATGTCAGACGATGAGCAGCCCAGCCAGATGGCGGTTTTAAGCAACAATCATAAGAAGCTCTTAAAAATGATGCCAGACATGATTCCAATCAACCATTTTTTAAGCAATTTAAACCAACACTTGGCCAATAATATGAACAATCATGCAAGCGACTCGAACAACAACAAAAACAACGAAAATCGCAGCGACAATGTTGAAGAGAAGACTTTGAACGCTCTGCATGCTGCTAGTATTCTGGAAAAGCTCAGCAGTCTTCACCAATTGGGTGAAGGTTCGGATCTCATTGGCAACTTGCTAGGCATCAGTGATCAAGKTATGTTGAACAAAGTGTTCATGTCTTCGGCTGATGAAGCCGCCAAGCTGCTTGGCGTCGATAAATAA
Protein Sequence: MPVDMHISYQFFDKNLFIFSEPKAMERRNSTNSESSIEPMEVSSSNKTVSSDANSSLAIKTSHESDNVESDENEDYLNNNRCNNEQLNDTKTSLDSNFVRRDNLRQLMDKMLQKKILTAAQNNNNNSSEENLNSSNMDLVENSHSDNEHKNSATINDGTKYVCPICETISLTQHEFTTHIRNHNNIRDASDDSTTFTCRICSKVLSSASSLDRHVLVHTGERPFTCKYCHLTFTTNGNMHRHMRTHKQHDQYESDASTDSSGGSSEAARRNNLLSGIGSFPHKRKSTEEDMLASHKRKVNRHVNHNNNNLISLNQQKFCCPVCERNDFPSMINLESHMDKEHPTIPAKCRHCEVVFKSHKALNAHRCGNPQSVNIMQGFKDLTFVDFSSEKFPIIAKSMCEQSIRTPISSQKFECPKCYRAFPCASAVEIHIKDCLNEFVVNRKRQMSETSEEDAKRDDFFANLSLQNRSLPTSEAPSTPTSHADKSSFSSPSMIMLRDIKQEMRSTPPSFYHQYFGEGGRDFADIESMIKATSSGGLDRPVPEKDQHIYNKDEEEAQDAFTSEFRKMKMRGEFPCRLCTMIFPNLRALKGHNRVHLSAAGPGPYRCNMCPHSINDKAALIRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHGKSTRDDVKKSIIYHPSEDSSVDDHSKKIQMFNSPEFDDHDGLPKDRSSTPVSHLKEMLGGDRQQSKIQVKSMDKLKSFNRNFDNDIEEETHLETRPMDLSMDALDLSKKTNSYSVDADEEDDLESDLDDDQPXHEQEAEIPKFDLFDKNPHLMFMQQQLLNESMPKLDPAQFFQLAQMYRTFGFPTPGFPIHPGLLMQNPLLASTALNDMKNFFQKDMMPSTPQPPQMSGGSLIVNPFVSPDSSPTGPPPVQTTSLQQQSPVPSNQIQIQPFPLTPQESPKKTATPIQQTPLTPQHQNMNHTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQFWAQRQRGSHNLMRRTPSIPSINQPMMPSSMQSMQGMQNSFGVGISEQVKYAILAQQLKARESPKNLIPQQFQMSLPQSLQPQIQMHIKEEPNLEMSPKSSTPMPDDDEPKLVIDEEYQAEDLSKSSDSVPAATVGQNNLAARKIAENILEQAIKMSYETQTKSLSYNGEMKDFEAKXVNHDTDVRESLPFVQTMKEEGNDLVSVSRLVDNATNAMMFSNYFSRPEPPIMDLSDEEGLVAPGSASDSNNSGTDEPNTSSLSSEKKKSAYSLAPNRVSCPYCQRKFPWSSSLRRHILTHTGQKPFKCSQCPLLFTTKSNCDRHLLRKHGNIESAMSLQVPIDEMPEPVKEPVQKPTVQPAAPPTKDDNEHVSKLTMSIPSFNIPMQQVSQVAPNAQIKVENNLPSTLNSLSCATNTTTSSDLPFKCHLCDGSFSERVTCLEHIKQIHSADFAILMAKVTLETDPEVMASPDDEDGSLGMGNNAVFDNKGKYPDYANRKVICAFCLRRFWSTEDLRRHMRTHSGERPFQCDICMRKFTLKHSMLRHRKKHSGLQHMHHLGGQNIHSPGQDGNGGSGLHSMLTNAHSASDMSDDEQPSQMAVLSNNHKKLLKMMPDMIPINHFLSNLNQHLANNMNNHASDSNNNKNNENRSDNVEEKTLNALHAASILEKLSSLHQLGEGSDLIGNLLGISDQXMLNKVFMSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -