Basic Information

Insect: Parochlus steinenii
Gene Symbol: -
Assembly: None
Location: scaffold702:1839-6462[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.3e-05 0.0013 18.6 0.7 1 23 169 191 169 191 0.95

2 14 0.0013 0.051 13.7 2.2 1 23 197 219 197 219 0.97

3 14 1.1e-05 0.00045 20.1 1.6 1 23 329 351 329 351 0.97

4 14 0.00058 0.023 14.7 0.2 1 23 357 380 357 380 0.95

5 14 4.1e-05 0.0016 18.4 1.2 1 23 431 453 431 453 0.97

6 14 0.046 1.8 8.8 0.5 1 23 476 498 476 498 0.92

7 14 0.0028 0.11 12.6 0.2 1 23 504 527 504 527 0.97

8 14 0.03 1.2 9.3 4.3 2 19 535 552 534 553 0.95

9 14 5.7e-05 0.0023 17.9 4.8 1 23 562 584 562 584 0.96

10 14 0.8 32 4.9 0.3 3 23 591 611 589 611 0.96

11 14 7e-06 0.00028 20.8 0.4 1 23 617 639 617 639 0.98

12 14 0.0047 0.19 11.9 0.2 3 23 647 667 645 667 0.97

13 14 0.00019 0.0078 16.2 0.4 1 23 673 695 673 696 0.95

14 14 1.2 49 4.3 0.1 1 23 710 732 710 732 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.3e-05	0.0013	18.6	0.7	1	23	169	191	169	191	0.95
2	14	0.0013	0.051	13.7	2.2	1	23	197	219	197	219	0.97
3	14	1.1e-05	0.00045	20.1	1.6	1	23	329	351	329	351	0.97
4	14	0.00058	0.023	14.7	0.2	1	23	357	380	357	380	0.95
5	14	4.1e-05	0.0016	18.4	1.2	1	23	431	453	431	453	0.97
6	14	0.046	1.8	8.8	0.5	1	23	476	498	476	498	0.92
7	14	0.0028	0.11	12.6	0.2	1	23	504	527	504	527	0.97
8	14	0.03	1.2	9.3	4.3	2	19	535	552	534	553	0.95
9	14	5.7e-05	0.0023	17.9	4.8	1	23	562	584	562	584	0.96
10	14	0.8	32	4.9	0.3	3	23	591	611	589	611	0.96
11	14	7e-06	0.00028	20.8	0.4	1	23	617	639	617	639	0.98
12	14	0.0047	0.19	11.9	0.2	3	23	647	667	645	667	0.97
13	14	0.00019	0.0078	16.2	0.4	1	23	673	695	673	696	0.95
14	14	1.2	49	4.3	0.1	1	23	710	732	710	732	0.95

Sequence Information

Coding Sequence: ATGGACGAACCATTTTTATGGGCCAACTCGCACCGTTCACGGCAGCAAGGCTTTGAGATAATAGAAGAGAGAAATGTGGATGACGATATAATATACGAGGGAGATGAAGATCAGTATGAGCAAGAAAACAACCGCTCTGGAGAAGATCCGGAAGAGTTCTACACTATAGGCGACCAGATCATAGAAGTGCCTCAAGAGAATCTGATATATCTAACGGATGAAGGAGTTGTGAGTGATCACATGAGAGATATTGGTGTGAGAGACATGGGCCACCTGATTGAGCAGCAAGTTCAAGAAGCTGAAAACAAGATAATTGGTGATCATCAAGACTATACGGAAACAGTAGAAGAAGTCATTACTGAGGAAGATTGGATTCAATCTCAAGGTGAGGAATGTGTTCAAGTTGCTATGGAGCAAGTTATAACATCAGATAATATTGCCGAAGAAGATCCCGACACAGTTCCATTACAAACAGATCAAGATGAATACACAACTTCCAGACCATATCCATGTGATTTCTGCAGCCGCCGCTTTCGAAAAAAGGCAAATCTTATGAATCACATGGTCGCTCATCAAAACGATAGACCACATGTTTGTAATTTGTGTGGTGCTCGGTACATACGAAGATGTGATTTGCTGAATCATCTTAAGATTCATGCTTACAGTCCAGATTTGGAGGAGTCTGGTTCACACTCTAATCGCAACGCTGGATATGATGATCCTTTGGATTTCAATGACTCGGCAGAAGATGAAGACAATGCCAAAAGATACAACAGCAAACGCAGGAATGACGCTGATTACTATTCCAAGCAAAAAACAACTGGAGGAAAAAAGTCTAACGAGCCCAAGCCGAAACCAGAGAAACCTCCTACTAGAATTGTTATGGAAGAAGTTACTGATAACTACAACGTTACCTATGCTCATGATGGTCAACAAGATTTGAGATCCAATGAGAGGTTCCCAATTCTTGATCCACGAAAGCCATTCGTCTGTCAACACTGTGGAGTTAGTTTTACTCGCCAAAAAGCATTGGAATCACATTCTAGACTTCATGAGTCTGATGTGACACACGATTGTGAAATTTGTGGTGATACCTTCTACGATCCAGGAACTTTGGAGGACCACATGATTAAACGCCACACAAACATTAATCCAGGAATGAAGAACCGCTCTCGTGGTCAGCCAGCWATCATGATGCCAACMGATTTTGAGCCAGATGACAGTAATTCTGACTATGAGCCCAAAGTCGAGTCTGAAGATGAAGACGAAGATTATGGAGACGAGGGAAGTCATTATTGTGATCAATGTGGAGACACTTTTGCTCGAGCTGATTTGCTTAAGAAGCACATTAAATCACATTACAATAACATTAAGTCTGAATTGATTTCGGATGATGAGGATAATTATGAGGGTAGCACTCATCAGCATTGCTGCAATCAATGTGGCGCCAAATTTTCAGGAGCTTTGGATTTGTTGGCTCATGCTGAGGAGCACGCTCGTTTTCAGCCATTCAAGTGTCAGTTGTGCGGAGAAACATTCATCGACGATGGCAAGATAAAAATGCACTTGAACGTTATGCATTCTGCCGAGTTGAACGAATGTTCTTGCAAACTGTGTGGAAAACAATGTCGTGACCAGCGATCCCTGATAAAGCACTCATGGGAGCATTCAAGTGGAAAATCTCATCCTTGTTCCAAATGTGGCAAAACGTTCCACAATAAGGCTCGTTTGAAGCGTCACATGGTCTCGCATCGTAACAAGAGTGTTATCTGTGAAGTTTGCAACGATGAATTCCCGGATGGTAGAACTTTGATGAATCATCGTCACTCACATACAAAATCGAATCAATTTCCGTGTAGCCAATGCGGCAAGTCTTTTGGATCGAGAAGTTCCCAGCAAATTCATATTCGAATTCATACGGGTGAAAGGCCTTACGGTTGTCGTTTTTGCTGGAAGGCTTTTGCTGATGGTGGCACTTTGAGAAAACATGAGCGTATTCACACAGGTGAAAAACCTTACGCTTGCTTGGTCTGTCCTCGGGCTTTTAACCAGCGCGTGGTGCTCCGCGAACATATTCGATCTCATCATTCTGCTCCAGATCCAAGACATGGAACTCCAAATAATCCATACTACTGTGCAGTTTGTGAAGATTTGTTCGAAGTGGCCACTGATCTGATTCATCACATTATCCAGCATTGTGACATGAGCACRGCAGCCAAACGWGCACCAGTTACTGGACCWCGCAAATACAAGAGAAGACGCAAGTTGAAGCAACATGAAATTGATCGATTGAATACGGAGAAGTTGCTACGTGGAGACTTTGATTATGGACCATCGGATAATGAGGCAGCAGAGCCACCACCHAAAAAGAAGGAAGTGGCTGGTTATTCAGGATTTGGKACTTCATCGAGAATGGTGAAATATGACTACGCTCCCTCGACAAGTCGTGCTGGTCCAAGCAGTTCAACCATATCGTTCACTGATGAACGTAATTTCATCGCTCCAGAAAATTTGATACCCGACGAGATCCTTAATCCAACATCTGGAAAACAGAAACCAAGACGTTACGACAACGARGAGTTTATTGATGAAATGATTTCTTCCATGGTGCCTTCCAGAAAGCGAAATCAGTCTTCCCCTCAGTCTTCCTCTCGTCCYAAAATGATTCAYACGGAGAAGTCTCGTGTACCAGTTTATGATGGTAAAAAGAAGGGYAAACCGATGGTTACTAAACAACCAGTGCAGCCAATTAGAACGAGTGCWCGCAAAAATCAAACTCCTACAAAAGTGGATACTGAGCAAAGTGAGTCGGAGGATGATGAATACGTCAATGAACTGGTCATAAAGAAGGAAATGGCTCAACATGACATTGTAAATGATCTGACGGAGATTCTCTACTCGCCAAGCCAACGTGCCATTGCCGATGAAATGGAGCTTAGTGAGGAAGAGTCAAGCGATGATGAACCTGGTCGACGACCCAGAAGAAATGTTAAGTCCCGATACCTGTCTCTTATACACATCTAG
Protein Sequence: MDEPFLWANSHRSRQQGFEIIEERNVDDDIIYEGDEDQYEQENNRSGEDPEEFYTIGDQIIEVPQENLIYLTDEGVVSDHMRDIGVRDMGHLIEQQVQEAENKIIGDHQDYTETVEEVITEEDWIQSQGEECVQVAMEQVITSDNIAEEDPDTVPLQTDQDEYTTSRPYPCDFCSRRFRKKANLMNHMVAHQNDRPHVCNLCGARYIRRCDLLNHLKIHAYSPDLEESGSHSNRNAGYDDPLDFNDSAEDEDNAKRYNSKRRNDADYYSKQKTTGGKKSNEPKPKPEKPPTRIVMEEVTDNYNVTYAHDGQQDLRSNERFPILDPRKPFVCQHCGVSFTRQKALESHSRLHESDVTHDCEICGDTFYDPGTLEDHMIKRHTNINPGMKNRSRGQPAIMMPTDFEPDDSNSDYEPKVESEDEDEDYGDEGSHYCDQCGDTFARADLLKKHIKSHYNNIKSELISDDEDNYEGSTHQHCCNQCGAKFSGALDLLAHAEEHARFQPFKCQLCGETFIDDGKIKMHLNVMHSAELNECSCKLCGKQCRDQRSLIKHSWEHSSGKSHPCSKCGKTFHNKARLKRHMVSHRNKSVICEVCNDEFPDGRTLMNHRHSHTKSNQFPCSQCGKSFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACLVCPRAFNQRVVLREHIRSHHSAPDPRHGTPNNPYYCAVCEDLFEVATDLIHHIIQHCDMSTAAKRAPVTGPRKYKRRRKLKQHEIDRLNTEKLLRGDFDYGPSDNEAAEPPPKKKEVAGYSGFGTSSRMVKYDYAPSTSRAGPSSSTISFTDERNFIAPENLIPDEILNPTSGKQKPRRYDNEEFIDEMISSMVPSRKRNQSSPQSSSRPKMIHTEKSRVPVYDGKKKGKPMVTKQPVQPIRTSARKNQTPTKVDTEQSESEDDEYVNELVIKKEMAQHDIVNDLTEILYSPSQRAIADEMELSEEESSDDEPGRRPRRNVKSRYLSLIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01160663;
90% Identity: iTF_01160663;
80% Identity: -