Basic Information

Insect: Parochlus steinenii
Gene Symbol: -
Assembly: None
Location: scaffold138:152000-156801[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.002 0.081 13.0 0.4 3 23 5 26 3 26 0.95

2 29 0.0035 0.14 12.3 1.8 1 23 32 55 32 55 0.94

3 29 1.4e-05 0.00056 19.8 0.4 1 23 61 83 61 83 0.96

4 29 0.0049 0.19 11.8 3.1 1 23 89 111 89 111 0.98

5 29 0.34 14 6.0 2.0 2 22 118 138 117 140 0.85

6 29 0.005 0.2 11.8 0.1 2 23 147 168 146 168 0.95

7 29 6.1 2.5e+02 2.1 4.7 1 23 171 193 171 193 0.91

8 29 0.8 32 4.9 0.9 3 23 366 387 364 387 0.94

9 29 1.8 72 3.7 0.6 2 23 427 449 426 449 0.90

10 29 0.4 16 5.8 0.2 1 23 487 510 487 510 0.96

11 29 0.4 16 5.8 0.6 3 23 521 542 520 542 0.86

12 29 0.00048 0.019 15.0 1.0 1 23 604 627 604 627 0.97

13 29 0.014 0.57 10.4 1.1 3 23 638 659 637 659 0.94

14 29 0.23 9 6.6 0.4 1 23 665 688 665 688 0.92

15 29 3e-05 0.0012 18.8 2.7 1 23 712 735 712 735 0.97

16 29 0.0011 0.043 13.9 0.5 1 23 844 867 844 867 0.93

17 29 0.017 0.69 10.1 1.0 1 23 875 898 875 898 0.91

18 29 0.68 27 5.1 3.4 3 23 932 953 931 953 0.96

19 29 0.24 9.7 6.5 0.2 3 23 961 982 960 982 0.95

20 29 0.027 1.1 9.5 0.2 3 23 1003 1024 1001 1024 0.94

21 29 0.023 0.93 9.7 0.2 1 23 1030 1053 1030 1053 0.96

22 29 0.049 2 8.7 0.1 3 23 1063 1083 1062 1083 0.96

23 29 0.22 8.7 6.6 0.7 3 23 1089 1109 1088 1109 0.97

24 29 0.017 0.68 10.1 0.1 2 23 1120 1141 1119 1141 0.96

25 29 0.00062 0.025 14.6 4.4 1 23 1147 1169 1147 1169 0.97

26 29 0.0025 0.099 12.8 1.3 2 23 1174 1195 1173 1195 0.93

27 29 0.0016 0.064 13.4 5.4 1 23 1201 1223 1201 1223 0.98

28 29 2.9e-05 0.0012 18.8 0.4 2 23 1231 1253 1230 1253 0.92

29 29 0.00015 0.0061 16.6 0.1 1 21 1259 1279 1259 1280 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.002	0.081	13.0	0.4	3	23	5	26	3	26	0.95
2	29	0.0035	0.14	12.3	1.8	1	23	32	55	32	55	0.94
3	29	1.4e-05	0.00056	19.8	0.4	1	23	61	83	61	83	0.96
4	29	0.0049	0.19	11.8	3.1	1	23	89	111	89	111	0.98
5	29	0.34	14	6.0	2.0	2	22	118	138	117	140	0.85
6	29	0.005	0.2	11.8	0.1	2	23	147	168	146	168	0.95
7	29	6.1	2.5e+02	2.1	4.7	1	23	171	193	171	193	0.91
8	29	0.8	32	4.9	0.9	3	23	366	387	364	387	0.94
9	29	1.8	72	3.7	0.6	2	23	427	449	426	449	0.90
10	29	0.4	16	5.8	0.2	1	23	487	510	487	510	0.96
11	29	0.4	16	5.8	0.6	3	23	521	542	520	542	0.86
12	29	0.00048	0.019	15.0	1.0	1	23	604	627	604	627	0.97
13	29	0.014	0.57	10.4	1.1	3	23	638	659	637	659	0.94
14	29	0.23	9	6.6	0.4	1	23	665	688	665	688	0.92
15	29	3e-05	0.0012	18.8	2.7	1	23	712	735	712	735	0.97
16	29	0.0011	0.043	13.9	0.5	1	23	844	867	844	867	0.93
17	29	0.017	0.69	10.1	1.0	1	23	875	898	875	898	0.91
18	29	0.68	27	5.1	3.4	3	23	932	953	931	953	0.96
19	29	0.24	9.7	6.5	0.2	3	23	961	982	960	982	0.95
20	29	0.027	1.1	9.5	0.2	3	23	1003	1024	1001	1024	0.94
21	29	0.023	0.93	9.7	0.2	1	23	1030	1053	1030	1053	0.96
22	29	0.049	2	8.7	0.1	3	23	1063	1083	1062	1083	0.96
23	29	0.22	8.7	6.6	0.7	3	23	1089	1109	1088	1109	0.97
24	29	0.017	0.68	10.1	0.1	2	23	1120	1141	1119	1141	0.96
25	29	0.00062	0.025	14.6	4.4	1	23	1147	1169	1147	1169	0.97
26	29	0.0025	0.099	12.8	1.3	2	23	1174	1195	1173	1195	0.93
27	29	0.0016	0.064	13.4	5.4	1	23	1201	1223	1201	1223	0.98
28	29	2.9e-05	0.0012	18.8	0.4	2	23	1231	1253	1230	1253	0.92
29	29	0.00015	0.0061	16.6	0.1	1	21	1259	1279	1259	1280	0.95

Sequence Information

Coding Sequence: ATGGTGGTAATCTGTGAACAGTGCGGAAGAAACTTTCCGAAGCCCTGCAAGCTTAAATATCATATAGAAGTGGTTCATTTAAAAATAAAAAATTTTCAATGTGAATATTGTAATGAACTGTTTGCTAGTTCCACTGCTTTGAAAATGCATCATGTGAGAAAACATTCAGATGCTTGTAACTTTGCTTGTGAAGATTGCGATCGAAGCTTTAAAACACAAAGTGGCCTAGATCAACACTATACCATTCATGATAAAGGAAAAATATTCACTTGCTTGGAATGTGGACTAGTTATTAAACATAGAACTCAATACAAAAACCATTTGAAAAAACACGAAAAAGATCTTGATACCAGTTGTAAAATCTGCAACAAACAATTCGCAGATTACAAGAAAAAGAAAGAGCATGAGTACAATACACATCGAAAAAACCCTTTGATTCCTTGTCCATTCTGCTCTAAAGTAATCTATACACAAGGAACTCTTGAGAAGCACTTGGCAAATCATCCAGTGTTCAAATGTGATATTTGCGATCACACAGAGTTGAAGAAATCAGAGTTCAACAAGCATATGCACGATCACCTTAGAAAATTAAAGAAAATCTGTATCAAAAAGTTTAAGATCAGGAAATCTAAAAAATCTGTTCCAATGAAAAATAAAGTTACTGTCATGCTTGAAACTCAAAATTTCATGCAAGAAAATAGCAACGAAGAGCCAGACCCATTGACATTTCTACAACTTGAAGAGGATTTGAGGCCACAAGATTCGGAAACAATTAAAATTAAGGAAGAACTGATGGATGATGATGAGTTTGATTACAGTTACATGTCTAGTCAGTTAAATGACATCAAAACAGAGCCTGAATTGGAAGGATTAAATTTATTAATGGATGTTTCTGAAGATATTGATGATGCACCTTCAGTTACCTCTACAATCGAAAACTTAAAAACTGAAGTTGAAGAAGAAAGTTTTTCCAAAAGTGACGTAGATTTTCCAAACGAATATCAACATAGTGCTCACAAGATAAAAAAGCATAGTGAAACTATTAAAAAAGAATCACAAAAAGAACGAAAAAATTTAGCATCAGATGAAATGATTTGCTTTAGCTGTCCAGCGCACTTTCAAGATAGAGCTGATATGAAAGCTCATACTTTGAAAAGACATGGCAGAAAATCTAAATACGATTGCTTGAGTTGCCACTTTACTTTCGTTTCTCCTCAAGCTAGGCATCAACACAAAGTTAAGTTCCACGATGATGGTACTTTGAAGCCTGGAAGAAAAACATGTAAGGTATGCAGGCARAAGTTTGAAACAATTCTTGCGATGAAAGAACATTACGTAAAGGCACATGAAAATGAAAATTCTGAAGCTAATGATGAAATTATTAAGATAGAGATCACTCCAGATGTCAAGCAAGAAAATTATGATGAAGATGAAATACCTTTAAAAGTGGGCAAAAAATTTTCATGCAAAAACTGTCCTAGTTATGCCAGCACATTAGCCGCTTTAATGACTCATGTTCGATTAAAACACTTGGACTTTTCAAGACCTGATCGTCAATACTGTATAGATTGCTCTCAGATGTGCTCTAGTAAAGAAGAACTTAAAGCTCATGGCTTGCAAGAACATCAAAGAACATATGATTTTGACTGTGATTTGTGCGAATTCACTTTTACTGGTGGTCAGCCGAGATCTTGCCATAAACTTTCGGCTCATGGTGTAGAATTTGAGCCAAGTTCTAGAACTAGTAAATTTTACAAAAACCACCAGATTCAGTATTCGGAGGAAGATGATTCTATGGATGAAGAGAATTTTCCGTGCAAAAACTGTCCCAATGCCTACGAAACTTTGAAGCATCTTCAATCTCATATTCGGATCACTCATTTAGATTTTTCAAAGCCTGATCGTCAATTTTGTGTTTATTGTTCTCAAATGTGTTCAAGTAAAGAAGAATTAAAGGCTCACGGTCGAGAAATTCATCGTCGAACATATGATTTTGATTGTAATTTGTGTGACTTCACGTTTGTTGATGACAATACAAGAGCTAGACATAAAATATCAGTACATGGTGATAAAAACACTGAATTGGAAGAAATACCCGAAAAACCTCAAAAATCTATTATAAACAAAGCAGAGTTCCATTGCAAAAACTGCGATAAATCTTTCGACAAAGCAGTTCTTTTACGCCTTCATATTCGAACAAGACACGTAGACTATTCTCGTCCAGATCGTCAGTATTGTATCGTTTGTACTCAAATGTGTGCCGGCAAAGAAGCACTAAAATCTCACGCTTTTCAAGAACATCAACGTGCTTACGATTTTGATTGTGATCTCTGCGAGTTTACTTTTGTTTGTCGTGTTGCAAGGACTAAGCATAAAGTAGTTCAACATGCCTACGGACTTGAATTAACGGAAGAGAAAGAGTTGATTAATCCAATTTACGAGCCTAAACGTAAAAAGCTGTTGGAAGACGAGACTGATTTCAAAATGGAAGAAAATGCGAAAAAAAGGATTCGAAAAAGACCCAGCAAGTATCCTTGTAAAGTTTGCGATGAAAGTTTTCGGTCAGTAGCTGATATGCAYCGACATACAGCTCAGCTTCATAATCTCAGATTTTATGGAAATTATTCCTGCCCCAAATGCGATGAGAAGTTTAAGTGGCAAAATTTGTTCACAGCCCATTTTGAAAAAGAGCACAAAGAGCACCTCCATTTAATTAAAACGAAGGATATGGAAAAGCCCATCGAAATTCTTGAAGATCCAAAAAAAATTCAAGATCACTTAGCAAGGATGTTTTGTGGATTGTGCTCTGAGATGTGCTCTTCCAGAGAACAAATGAAGCAACACACTTTAAAAAAGCATAATCAGAAATCACTTGTTGATTGTGAACTTTGTTGGTTTACCTTTTTAACTCAAGACGCTTTAAGAGATCATTTATTTATGGTACATCAACAGAAATTTAAGGCTTTGGAACGTAAAAAGAATCGGAGCAGAGAGCCTAAAATTGCATGCGAGTTTTGCGGAAAAATATTAAAGAACAAAGTTGTACTCAGTCATCATATTGCAGTAAAACACGAAAAAGTGAAACGGTTCCCTTGTGATATTTGTGAAGAAAAGTTCCTTACTCCATCTTTTGTTCGAAGACATGTTCAAAAAGTTCACGACGATGGCTTAAAACTAACAAGATCTTGTGGAGTGTGTGGATTAGARTTCAGATTAGCTCAAGAGTTTTATGATCACATTGATACTCATCAAGAAGAAAAAATATGCAGAATTTGTGGTGAAAATAGTCAAGATGATCAAAGTTTTAAAACACACATGAAAAATCACAGAAAAGTTGATGACAAGTACAAAAAAGTTGTTTGTGAATTATGCGGCAAGAAGTTTTTGAATGATGCATTATTGAAAGGTCATATGTTAAGCCACAGTACCGAAAAAACCTTCAAATGTATCCAATGTGAGAAAACATTTAGATTTCAGTCTTCATTATGCATTCATATGAACAGTCACAACAAGAAAATTGAGTGCAAAATTTGCCATCATAAATTTACTAGCAAGCAGGGTCTTGAAATTCACGCTGTTGTTCATAATGATTCACGTCCATATTCTTGTAAACTGTGCGGAAAAACCTTTAGGTACCAAGGAAATCATAGCTACCATATGAAAAAGCATTATGGAACTCTTCCAGAGATACCCTGTGAAATTTGTGGCAAGACTTTTAACAGTAAATTCTTTCTGAAATCTCACATGGTGCTGCAACACGAAAAGACAAAAGACTATAGTTGCGATGGATGTGGAGAAGCTTTTGCATTTTTGAAGCAACTACAGAATCATATGGAGTCGAATCAAAATGCAATTATTAAATTAGAACAAAACTTAGGAGTGCTGGAACCATATCATCAAGTTCTCCCACTTGAACCACAAGACCCATACCTACAGCCATGTGCCATTCGAAGTGACAGTGCATTAGCCAGAATCCTGGATTATCAGCCTTGA
Protein Sequence: MVVICEQCGRNFPKPCKLKYHIEVVHLKIKNFQCEYCNELFASSTALKMHHVRKHSDACNFACEDCDRSFKTQSGLDQHYTIHDKGKIFTCLECGLVIKHRTQYKNHLKKHEKDLDTSCKICNKQFADYKKKKEHEYNTHRKNPLIPCPFCSKVIYTQGTLEKHLANHPVFKCDICDHTELKKSEFNKHMHDHLRKLKKICIKKFKIRKSKKSVPMKNKVTVMLETQNFMQENSNEEPDPLTFLQLEEDLRPQDSETIKIKEELMDDDEFDYSYMSSQLNDIKTEPELEGLNLLMDVSEDIDDAPSVTSTIENLKTEVEEESFSKSDVDFPNEYQHSAHKIKKHSETIKKESQKERKNLASDEMICFSCPAHFQDRADMKAHTLKRHGRKSKYDCLSCHFTFVSPQARHQHKVKFHDDGTLKPGRKTCKVCRQKFETILAMKEHYVKAHENENSEANDEIIKIEITPDVKQENYDEDEIPLKVGKKFSCKNCPSYASTLAALMTHVRLKHLDFSRPDRQYCIDCSQMCSSKEELKAHGLQEHQRTYDFDCDLCEFTFTGGQPRSCHKLSAHGVEFEPSSRTSKFYKNHQIQYSEEDDSMDEENFPCKNCPNAYETLKHLQSHIRITHLDFSKPDRQFCVYCSQMCSSKEELKAHGREIHRRTYDFDCNLCDFTFVDDNTRARHKISVHGDKNTELEEIPEKPQKSIINKAEFHCKNCDKSFDKAVLLRLHIRTRHVDYSRPDRQYCIVCTQMCAGKEALKSHAFQEHQRAYDFDCDLCEFTFVCRVARTKHKVVQHAYGLELTEEKELINPIYEPKRKKLLEDETDFKMEENAKKRIRKRPSKYPCKVCDESFRSVADMHRHTAQLHNLRFYGNYSCPKCDEKFKWQNLFTAHFEKEHKEHLHLIKTKDMEKPIEILEDPKKIQDHLARMFCGLCSEMCSSREQMKQHTLKKHNQKSLVDCELCWFTFLTQDALRDHLFMVHQQKFKALERKKNRSREPKIACEFCGKILKNKVVLSHHIAVKHEKVKRFPCDICEEKFLTPSFVRRHVQKVHDDGLKLTRSCGVCGLEFRLAQEFYDHIDTHQEEKICRICGENSQDDQSFKTHMKNHRKVDDKYKKVVCELCGKKFLNDALLKGHMLSHSTEKTFKCIQCEKTFRFQSSLCIHMNSHNKKIECKICHHKFTSKQGLEIHAVVHNDSRPYSCKLCGKTFRYQGNHSYHMKKHYGTLPEIPCEICGKTFNSKFFLKSHMVLQHEKTKDYSCDGCGEAFAFLKQLQNHMESNQNAIIKLEQNLGVLEPYHQVLPLEPQDPYLQPCAIRSDSALARILDYQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -