Pste005387.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Parochlus steinenii
Gene Symbol
Br140
Assembly
None
Location
scaffold276:99364-109869[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.0012 0.048 13.7 2.2 1 23 1201 1223 1201 1223 0.97
2 24 0.0004 0.016 15.3 2.0 2 23 1274 1295 1274 1295 0.97
3 24 3.4e-05 0.0014 18.6 0.8 1 23 1301 1323 1301 1323 0.98
4 24 0.0038 0.15 12.2 3.2 1 23 1329 1351 1329 1351 0.96
5 24 3e-05 0.0012 18.8 0.5 1 23 1356 1378 1356 1378 0.99
6 24 0.0034 0.14 12.3 1.8 2 23 1385 1407 1385 1407 0.94
7 24 0.42 17 5.7 0.6 2 23 1413 1435 1412 1435 0.91
8 24 2.9e-05 0.0012 18.8 1.0 2 23 1448 1470 1447 1470 0.97
9 24 0.0069 0.27 11.4 4.5 3 23 1478 1498 1476 1498 0.95
10 24 0.082 3.3 8.0 0.2 2 23 1505 1526 1504 1526 0.96
11 24 0.65 26 5.2 0.3 2 23 1546 1567 1545 1567 0.96
12 24 0.00038 0.015 15.3 4.1 1 23 1573 1595 1573 1595 0.98
13 24 0.0025 0.098 12.8 3.9 1 23 1601 1623 1601 1623 0.96
14 24 0.00012 0.0046 16.9 0.8 1 23 1629 1651 1629 1651 0.97
15 24 2.2 87 3.5 0.1 1 20 1857 1876 1857 1878 0.91
16 24 0.0082 0.33 11.1 2.3 1 23 1885 1907 1885 1907 0.98
17 24 1.4e-05 0.00055 19.9 0.5 1 23 1913 1935 1913 1935 0.99
18 24 0.0013 0.052 13.6 0.8 2 21 1942 1961 1941 1962 0.92
19 24 0.083 3.3 8.0 4.8 1 23 2001 2023 2001 2023 0.98
20 24 7.8 3.1e+02 1.7 1.1 2 23 2034 2055 2033 2055 0.84
21 24 0.069 2.8 8.2 1.9 1 23 2060 2083 2060 2083 0.95
22 24 1.2e-05 0.00047 20.1 2.7 1 23 2089 2113 2089 2113 0.98
23 24 0.0063 0.25 11.5 0.7 1 23 2118 2140 2118 2140 0.98
24 24 0.032 1.3 9.3 1.1 3 23 2148 2169 2146 2169 0.95

Sequence Information

Coding Sequence
ATGCAGACCATTAAATGTGTTGTCGTGGGTGATGGAGCCGTCGGTAAGACGTGCTTGTTAATTTCATACACCACCAACAAGTTTCCATCCGAGTATGTGCCAACAGTCTTCGACAACTATGCAGTCACTGTAATGATTGGCGGTGAGCCTTACACATTGGGCTTGTTTGACACAGCTGGTCAGGAGGATTACGATAGACTTCGTCCATTGTCATATCCCCAAACTGACGTATTTTTGGTGTGTTTCTCCGTGGTCAGTCCAAGYTCATTCGAGAATGTGAAGGAAAAGGTAAGATATTATGAAATTATGGTTTTTAATGTCTCGCTGACATTTTCTTTGTTAGACTTCAATATAAATGAATACATCAAATCAATAAAGCCACAGGGTCCTCCATTCGGCTGTCCAAAGTGTGAAAAGCAGTACAAATCAGTGATTGAAATCACTTACAATATCTGCGATGCTCCCCCAAAGCCAAACGCATACATTCGGTTTATTGAGAAGTCTACTGAGGAGTTAGATGGTGAGATTGAATATGATGTAGATGAAGAAGATACCACTTGGTTGGCAATCATTAACGAAAAGCGTGACTCGATGAGCCTGAATGCAGTTAGTGTAGATAGTTTAGAGCTTTTAATTGATCGTCTGGAGAAAGAATCTTTCTTCCAAGCTTTAGCAAATGGAAATGGCCAAGGAGTAGCTGTTGATGAGGATGCAGTCTGTTGCATTTGTATGGATGGTGAATGTCAGAACACAAATGTTATACTGTTCTGTGATCTTTGTGATTTAGCGGTTCATCAAGACTGTTTTGGAGTGCCTTATATACCTGAAGGACAATGGTTATGTCGTCGTTGCTTACAAAGCCCAAGTCGACCGGTAGAATGTGTTTTATGCCCAAATTCYGGTGGCGCTTTTAAACAAACTGACCAAACTGGCAAATGGGCTCACGTTGTTTGTGCTCTTTGGATACCAGAAGTTCGTTTTGCMAATACTGTTTTTCTSGAGCCAATTGATTCCATTGAAATGATACCACCAGCGCGTTGGAGACTTACGTGCTATATTTGCAAACAAAAAGGTGTTGGTGCTTGCATACAATGTAACAAGAACTATTGTTATTCAGCGTTCCATGTGACCTGTGCCCAATATGCCGGACTATGTATGCGAATGGAAACAGTGAAACTCAACGATGCTCATCCTATGGTTGTACAAAAAATTGCATTCTGTGACCAACATACTCCAAGTAATTTTGGAGCTGAAAAATCTCCAATTGAATGCGAAAAAGCTCGTGAAGAATGTCGGAACAAAATGAAACAAGCTCGAAAATTGTTAGCTAAAAGGCGTACAATAGCACCTCTTATTTTGGTGCCAACAATTCCACAAGATCGGATTCAAGAAATATCCGCTTTRGTTAATATTCAAAAGAAAAATGTTTTCATTCAACGTTTGATTGCGTATTGGACGCTWAAAAGACAAAATCGTAACGGAGTTCCTTTATTACGACGTCTTCAAAGTTCACAATCGAGTGGAAATCGAAATAATGGTGGTTTTGAGGGATCTCCTGATATGCGAGAACTTTATCGTCAACTTAAGTACTGGAAAAGTTTGCGACAAGATTTGGAACGAGCTCGCTTACTATGCGAGTTGGTGAGAAAACGAGAGAAATTGAAGCTTTTGCTTATAAAAACTACGGAAGAGTGTGTTCTCAAGGAGCTCAATCCTCTAGGAAATTCTATGAGTCACATATTAGATCAACTGGTGTCAAAAGATTCGCTAGAAATCTTCCAAGAACCAGTTGATGTTAATGAAGTTCCAGATTATGCAAATGTTATTAAACATCCAATTGATCTTGGTACTATGAGAGAAAAGCTTCAAGCGGGTCGTTATGAGACTTTGGACGATCTTGAGGCAGATTTCGCCCTTATGGTTCGTAATTGCTTGTTGTATAACGACAAAGACACAATTTTCTACAAAGCTGGCGTTAAAATGAAAGAGCAAGGTGGGGCTGTCTTTAGGCAGTCGAGGAGGGAGCTTGAAAAGGTTGGATTAGTGGAACCTCCACAGAGCGATAGTAATATTGTTAAGGATATTGAYCAAGACCTAAAAGAGCTTCTCTTAAAACCRCCTCAAACAGAAGTAATTGAGCAACTGGAGCTATTAATGAATCGAGCCAATAGTATCAAACACGGGTTAACTAAAGCTAAAAAGTTGAAACAGCTAAAGGGCGAAATCGGAAAGATTAAGAGATACATCAGTTTTGAAACAAAGAAATCACTTGATGACTCGCAGTCAGATGGAGAGTCTTTTACATTGGTAACAGAGGTACCTGTTAAAATGCCAGCATTAGAACTCAAGACTCCACCAACTTCTCCAATAAAAGGGTTTAGCACTACATCGCCTAATATAGGAGTTAATCGAAGAAATGCTGTTTTATTTACACGGAAAGCACAAATAGCTGCTCTGAAAAGGCCAGACTTGCCTATGAAAGAAGARGAGGCAATGGAAGTTCAAGGGCTTAGCAAAACTGAAACAACCGTTCAGAAATTTCCCAAGAAAATGTCAMGAGGTCGAAGAAGTGCTAGCCATAAAAGTGCAGATAGATCTGAAAGCAAGAAGTCCTCGTTGCTCTCCCCAAAAGCTGGTCATAGTGGGTTRTCTTTAGATCCTCCTAAATTTGATGCCAAGATTCCAGATATTTTTCGACAATACCGAGGACAGGAGAGCAAAAAAACCCTTTCAAATTCAGACAACTCTGATTTTAATGAATCAAATAGTACGTGCAGYAGTTGTTGCGGAGGATTGAGTGAGTCTTGCACCACATCAGAGTTTGGCGATCAACTYAGCAACRTTGATTCGGAAATGGCTTCAGTAAATAGTGGCTCAGCAAACATGGCGATTCAAGATGAAGATTCTCAACGTAGTACAAAAAATGATGGTGATTTGGATGAAAGCAACGACTCAGAGATGGCAATCGGTAGTGGACATCATAAGCAGAAACTTAGCTCATTGCAGTTAGTATGGGCAAAATGTCGAGGATACCCCGCATATCCCGCTTTGATTATGGATCCTGACATCAAGAATTTTCAAACTCACAATAGYGTACCGCTGCCAACTCCTCCAAATAGAGTTCTTGCTCTCCGTAAAAATCACTCGGACACTGTTTTTCTGGTGCTATTTTTTGAYGCCAAGCGTACATGGCAGTGGCTTCCTCCTTCCAAGCTGGAGCTTCTAGGTATCGACAAACAGACAGATGAGATGAAATTGGTTGAATCAAGAAAGCCACAAGAACGTAAAGCTGTGAAAAAAGCGTATCAAGAAGCATTGCATTATCAAAGCCAAGTCTCAAGTGCTAAACCTGAAGGAAAGTTATATTCGCTAAAGAAAATTTGTTTCACAATGGAAGAATATGAAGAGACTGAGTTTGAAGAGTATCTGGAATCCGAATCTCGAACGGAGTCTGAGGATCTGGACAGCAAATTTTTRGAGAGTGACGAAGAATCTTATGCTGATCCCCCACCAGCCAAATTTCCTAGAAAAACGAACCGTTCTCTGGACAGAATTGATCGAGAAATGCAAAAYTTAAAAACCTTCAATAATTCTGGAAAGTTTACATGCAAAATTTGTGATTTGAGATTTATGTTTGAATCCAGCTTAAAGAAACATTCCCTRAGACATTCTACTTTGGAGCAAAAGCCAATTGAGGAGGAAACCGTAGCKCAARATGATGAAGTTCAACTTTTCAGCTGTAAAAATTGCAGCCTCGAAATGACTTCAGTGATAGATTTACACTCACACAGCGCCAAACAGCATGATGATCTTTCCAACACATGTCTTCTTTGCGAAAAAAAATTTACAACATTTTCTTCGTTGTCCGTACACCTGCGTCGTCACTCTAATATTCGTAACTTCAGCTGCTCAGATTGTACTCAAAAGTTYATTACTTCAAGTGGATTGGCTCGTCATATTTTTACTCATACCAAAAACAGACCATTCAGTTGTACTTACTGCGAYAAATCATTTGCTTGTCGATCAGAGTTATCAAAGCACGGACAATTACACACTGGAAAAAAATACCAATGCAATGATTGCACCAAAGCTTATACAACCAAAACCGGACTCGGTGTACACATTAAAAGTCATCAAGAGAAAATMCCGGGAGTKTGTGAYCAATGCAATCTCAGTTGCCGCTCTCAAAAAGCGTTGAAAAACCACATTAAAGATGTGCATGATCGAGGTTTRATTGAGTGCGATGTCTGCAARAAACTCTTTACTTCTTTGCAAGCTTTTTCCCTGCACAACTCAAAATATCATTTGAATATTGAAGAAATTAAAGAAAAAGATAAAGTAAAGTGCATGGATTGTGATCGTGTTTACGCGTCTCGAAAGAATTTACAAGAGCACATGAAAAAAAAACATGCTGAACCTGGTAACCATCTTTGTAAAACCTGTGGAACAATTTGCTCAACACAGTTTGCTCTAGAAAAACATCAGCTAAAGCACCAAAAAGATTTTGTTCTGGAATGCAAAAAGTGTTTAATTTATTTTGTAAATGATGATGAATTAACCTTGCATCAAGAAAGTCATGTAGATGATCCATTAGAGCAGGAACCTAAACCAAAACAGTATAAAGACAAGCCAGTTACTTGTGAAGTTTGCTTGAAAGTCTGCAGGGGTCGGTGGTGGTATGATGTTCATATGACAGTCCATACAGGCGAGAAACCATTCAAATGCACCGAGTGTAACTATTGCAGTAGCACCAGCGCTAATCTTAAAGCTCATAGCAAAAAACACACTGGTGTACGCGAACATCAATGCCTCACCTGCAACAAATCATTCTCCGATAAAAAGACWCTTGTTCTACATTCCTACACTCATGAAACAATTCGTCCTTTTAGTTGCGAGATCTGTGGTCGTTCCTTTGTTACTAAATATATGGCCAATCAGCACACTCTCAAACATGTTTTGAAAAGTGAAACAAARGAAAATTTCCCGGAATATAAAAGGGAAGTGATCAGACGTCATGAACAGGTTAAAATAAATCGAGCCAAAGCACATAAAGATAATAATCAAATGAGCATTGAAGAGACYGAAGCGGAAGAAGGAGTCTATGTRCTTCAATTGCCAGCTGATTTTGATATGGAGAGAGATGACATGCGATTAGTTTTTGATGAACACAGTCAAAATTTGGAGTATGTCGAAGTATCGGCTGAGGATTCAAAAATTGAGGCTGCACATCAACCAGAAAACTCTGTCGTTGACGATGAAGAGTCAAAAGAATATTCGAATAGTATTGTTGCTTTCGAAGAAGAARAAATTGGAGTTATGCAAGAGTTTGTTGATGATTTGATAGAAGTTGATGCTGAATTCCAGGAAGACGTGCAACAAGAACAGGAAGTTGACCTGCAAGATATAAAAGTTGAAATCGAATATCAAATCGAGGAAGAGAATCMTATAGTCGATGATTTTGTATCAGAAGAACATCCATCTGAWTCCTTACAAATAGAACAGATTGTACAACCCTCACAATTTGGAAACCGGTTATACAAAACTAAATCGATAGCAATTATCTCTAAATATAATTGTATTTACTGCAAAAGTGAATTCATTTCAAATGAGGAGCTTCAGTTACATCTTGAAGAAGAAGCTTTAAAACGACCTTTCAAATGTGATTTTTGTCAGTATAGGTTTTTGCAAAAAGGAAAACTTGTGCGGCACCTCAAGATTCATAATCAACAGAAAGACTTTAAATGCGACATTTGCGGAAGTGCTTTCATTCAGAACTACACGTTAAAGCAGCACCTCCTCACTCATTTGGATATACGGCCGCTAAGCTGTAATTTCTGCAAAAAAGGATTTAGAAATCAAACAGCCTTAAACACCCACTTATACACTTGCGCCACCAACAACTCGGAAGAAGCTTCAATACATGATTACGATTCAATAGAAACAATTCGATCTAAAAAAAATGGCTATGGATTTATAAATGAGAGTAGTTTTGGAGACATGTTTAAATGTAGTTTTTGTACACAAAAATTTACTAAATTATCCATCTTAAGAAATCACACAAAGAAACATGCTAATCAAGAATTGAGCGGARCTCTTTTACAATGTGAATTTTGTGGAAAGAAAATTTTGCCGGAAAAAATGCAGCGTCATATTCATGACAATCATCCAACTATCAAACATCGGTGTCCACAGTGTCAGCAAATCTACACCACGTTTGAACGCCTTAAACTCCACGTAGAAAGAATGCACGTGACAGAGCTTTTGTATAGATGTGGCTACTTTGAATGTAACAAAGCATTTTCCACCAGTCATGCCCTCAAAAATCACATCAAAACTCATTCGATGGAAATGTTTCAATGCGAAATTTGCGAACAAATGCTSAAAGGTAAAGCAAATTATCAAAAACACAAAGCCAAGCATTTCATTGGGAAATCTATTGATTGCGAAAGATGTCCTATGAAGTTCTTTGACAAGCAGTCTCTTCATGCGCATTTAATTAAACAACATATTATTTTACAATAA
Protein Sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKVRYYEIMVFNVSLTFSLLDFNINEYIKSIKPQGPPFGCPKCEKQYKSVIEITYNICDAPPKPNAYIRFIEKSTEELDGEIEYDVDEEDTTWLAIINEKRDSMSLNAVSVDSLELLIDRLEKESFFQALANGNGQGVAVDEDAVCCICMDGECQNTNVILFCDLCDLAVHQDCFGVPYIPEGQWLCRRCLQSPSRPVECVLCPNSGGAFKQTDQTGKWAHVVCALWIPEVRFANTVFLEPIDSIEMIPPARWRLTCYICKQKGVGACIQCNKNYCYSAFHVTCAQYAGLCMRMETVKLNDAHPMVVQKIAFCDQHTPSNFGAEKSPIECEKAREECRNKMKQARKLLAKRRTIAPLILVPTIPQDRIQEISALVNIQKKNVFIQRLIAYWTLKRQNRNGVPLLRRLQSSQSSGNRNNGGFEGSPDMRELYRQLKYWKSLRQDLERARLLCELVRKREKLKLLLIKTTEECVLKELNPLGNSMSHILDQLVSKDSLEIFQEPVDVNEVPDYANVIKHPIDLGTMREKLQAGRYETLDDLEADFALMVRNCLLYNDKDTIFYKAGVKMKEQGGAVFRQSRRELEKVGLVEPPQSDSNIVKDIDQDLKELLLKPPQTEVIEQLELLMNRANSIKHGLTKAKKLKQLKGEIGKIKRYISFETKKSLDDSQSDGESFTLVTEVPVKMPALELKTPPTSPIKGFSTTSPNIGVNRRNAVLFTRKAQIAALKRPDLPMKEEEAMEVQGLSKTETTVQKFPKKMSRGRRSASHKSADRSESKKSSLLSPKAGHSGLSLDPPKFDAKIPDIFRQYRGQESKKTLSNSDNSDFNESNSTCSSCCGGLSESCTTSEFGDQLSNXDSEMASVNSGSANMAIQDEDSQRSTKNDGDLDESNDSEMAIGSGHHKQKLSSLQLVWAKCRGYPAYPALIMDPDIKNFQTHNSVPLPTPPNRVLALRKNHSDTVFLVLFFDAKRTWQWLPPSKLELLGIDKQTDEMKLVESRKPQERKAVKKAYQEALHYQSQVSSAKPEGKLYSLKKICFTMEEYEETEFEEYLESESRTESEDLDSKFLESDEESYADPPPAKFPRKTNRSLDRIDREMQNLKTFNNSGKFTCKICDLRFMFESSLKKHSLRHSTLEQKPIEEETVAQXDEVQLFSCKNCSLEMTSVIDLHSHSAKQHDDLSNTCLLCEKKFTTFSSLSVHLRRHSNIRNFSCSDCTQKFITSSGLARHIFTHTKNRPFSCTYCDKSFACRSELSKHGQLHTGKKYQCNDCTKAYTTKTGLGVHIKSHQEKIPGVCDQCNLSCRSQKALKNHIKDVHDRGLIECDVCKKLFTSLQAFSLHNSKYHLNIEEIKEKDKVKCMDCDRVYASRKNLQEHMKKKHAEPGNHLCKTCGTICSTQFALEKHQLKHQKDFVLECKKCLIYFVNDDELTLHQESHVDDPLEQEPKPKQYKDKPVTCEVCLKVCRGRWWYDVHMTVHTGEKPFKCTECNYCSSTSANLKAHSKKHTGVREHQCLTCNKSFSDKKTLVLHSYTHETIRPFSCEICGRSFVTKYMANQHTLKHVLKSETKENFPEYKREVIRRHEQVKINRAKAHKDNNQMSIEETEAEEGVYVLQLPADFDMERDDMRLVFDEHSQNLEYVEVSAEDSKIEAAHQPENSVVDDEESKEYSNSIVAFEEEXIGVMQEFVDDLIEVDAEFQEDVQQEQEVDLQDIKVEIEYQIEEENXIVDDFVSEEHPSXSLQIEQIVQPSQFGNRLYKTKSIAIISKYNCIYCKSEFISNEELQLHLEEEALKRPFKCDFCQYRFLQKGKLVRHLKIHNQQKDFKCDICGSAFIQNYTLKQHLLTHLDIRPLSCNFCKKGFRNQTALNTHLYTCATNNSEEASIHDYDSIETIRSKKNGYGFINESSFGDMFKCSFCTQKFTKLSILRNHTKKHANQELSGXLLQCEFCGKKILPEKMQRHIHDNHPTIKHRCPQCQQIYTTFERLKLHVERMHVTELLYRCGYFECNKAFSTSHALKNHIKTHSMEMFQCEICEQMLKGKANYQKHKAKHFIGKSIDCERCPMKFFDKQSLHAHLIKQHIILQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-