Basic Information

Insect: Parochlus steinenii
Gene Symbol: -
Assembly: None
Location: scaffold75:6495-12064[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0076 0.3 11.2 1.2 1 23 129 151 129 151 0.97

2 27 0.0012 0.049 13.7 1.1 1 23 246 268 246 268 0.97

3 27 0.028 1.1 9.5 4.2 1 23 274 296 274 296 0.95

4 27 0.00077 0.031 14.3 1.5 1 23 302 324 302 324 0.98

5 27 0.17 6.7 7.0 0.2 2 23 345 367 344 367 0.91

6 27 0.19 7.4 6.9 0.1 2 23 372 393 371 393 0.96

7 27 7.9e-06 0.00032 20.6 0.4 1 23 398 420 398 420 0.97

8 27 0.01 0.42 10.8 0.2 3 23 430 451 428 451 0.95

9 27 7.5e-05 0.003 17.5 1.1 1 23 456 478 456 478 0.98

10 27 0.079 3.2 8.0 0.8 3 23 486 507 484 507 0.95

11 27 0.0091 0.37 11.0 0.3 2 23 514 535 513 535 0.96

12 27 0.0029 0.12 12.5 0.5 2 23 548 570 547 570 0.92

13 27 0.00043 0.017 15.1 3.5 1 23 576 599 576 599 0.96

14 27 1.3 52 4.2 0.1 2 23 605 626 604 626 0.96

15 27 1.9 76 3.7 0.2 2 23 646 667 645 667 0.95

16 27 7.3e-05 0.0029 17.6 1.5 1 23 673 695 673 695 0.97

17 27 0.00012 0.0048 16.9 0.8 1 23 701 723 701 723 0.96

18 27 0.049 1.9 8.7 0.3 2 15 730 743 729 754 0.86

19 27 0.038 1.5 9.0 0.3 2 23 1056 1078 1056 1078 0.91

20 27 0.00084 0.034 14.2 4.3 1 23 1084 1106 1084 1106 0.98

21 27 3.7e-05 0.0015 18.5 0.7 2 23 1113 1134 1113 1134 0.98

22 27 1.4 57 4.1 4.0 1 19 1140 1158 1140 1160 0.86

23 27 2.7e-05 0.0011 18.9 1.9 2 23 1211 1232 1210 1232 0.98

24 27 0.0014 0.055 13.6 1.7 1 23 1241 1263 1241 1263 0.95

25 27 0.08 3.2 8.0 3.0 1 23 1307 1330 1307 1330 0.93

26 27 0.00011 0.0044 17.0 0.1 2 23 1336 1357 1335 1357 0.96

27 27 0.00012 0.0046 16.9 0.5 2 23 1363 1383 1362 1383 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0076	0.3	11.2	1.2	1	23	129	151	129	151	0.97
2	27	0.0012	0.049	13.7	1.1	1	23	246	268	246	268	0.97
3	27	0.028	1.1	9.5	4.2	1	23	274	296	274	296	0.95
4	27	0.00077	0.031	14.3	1.5	1	23	302	324	302	324	0.98
5	27	0.17	6.7	7.0	0.2	2	23	345	367	344	367	0.91
6	27	0.19	7.4	6.9	0.1	2	23	372	393	371	393	0.96
7	27	7.9e-06	0.00032	20.6	0.4	1	23	398	420	398	420	0.97
8	27	0.01	0.42	10.8	0.2	3	23	430	451	428	451	0.95
9	27	7.5e-05	0.003	17.5	1.1	1	23	456	478	456	478	0.98
10	27	0.079	3.2	8.0	0.8	3	23	486	507	484	507	0.95
11	27	0.0091	0.37	11.0	0.3	2	23	514	535	513	535	0.96
12	27	0.0029	0.12	12.5	0.5	2	23	548	570	547	570	0.92
13	27	0.00043	0.017	15.1	3.5	1	23	576	599	576	599	0.96
14	27	1.3	52	4.2	0.1	2	23	605	626	604	626	0.96
15	27	1.9	76	3.7	0.2	2	23	646	667	645	667	0.95
16	27	7.3e-05	0.0029	17.6	1.5	1	23	673	695	673	695	0.97
17	27	0.00012	0.0048	16.9	0.8	1	23	701	723	701	723	0.96
18	27	0.049	1.9	8.7	0.3	2	15	730	743	729	754	0.86
19	27	0.038	1.5	9.0	0.3	2	23	1056	1078	1056	1078	0.91
20	27	0.00084	0.034	14.2	4.3	1	23	1084	1106	1084	1106	0.98
21	27	3.7e-05	0.0015	18.5	0.7	2	23	1113	1134	1113	1134	0.98
22	27	1.4	57	4.1	4.0	1	19	1140	1158	1140	1160	0.86
23	27	2.7e-05	0.0011	18.9	1.9	2	23	1211	1232	1210	1232	0.98
24	27	0.0014	0.055	13.6	1.7	1	23	1241	1263	1241	1263	0.95
25	27	0.08	3.2	8.0	3.0	1	23	1307	1330	1307	1330	0.93
26	27	0.00011	0.0044	17.0	0.1	2	23	1336	1357	1335	1357	0.96
27	27	0.00012	0.0046	16.9	0.5	2	23	1363	1383	1362	1383	0.97

Sequence Information

Coding Sequence: ATGGAAGACTACCAAGGAATTTACCAAGATTCYGATGAAGATTATGAGCCTCCAATGCCTAAATCAGGTGTTAAGCGTATCAAACTGGAATCTAAAACTTCAGGAAGACCYAATAAAGCTCTAGATAATTTGTTTTCCCAGTTTAACGATCTTGTKAGCTCCAACAAAAGTAAAAACAGTAATACTCCTGACCAGAAAAAAWATCCCGTTGTCATAAAATTGGAAGCTGGAGCATCTAAGAATTTTAATACCAAAATTAGCAATTACATGAAGAAAAATGCAACAATTTCTCAGCCTCCGCAGAACTCTGCAGTCTCAGCTAAAGCGTCCAACTCCAATCATGTACAACTCGCTCTTCTGACTGCTCAATCYCAAGTCAAAAATTTCAAATGTAAAATTTGCGATATGTCTTTCCTGTTTGARACAACTCTTGAAAAACATCTTGTTCGTCATGAGATAGATAGTGAAAACCCAAAACCCGTTGTAATTTCAAAGCCACTTTCGGCTGATTCAAAGAAAAGAAGGATTTTGGGTGTAAAACCYAGAACAAACTTTGTTTACTACATTTGTGGCTGCTGTAAAATTCAATTTTTGGATTCAGACTCGCTCATGACTCACGAAGTCACCCATGAAAACCAGGACGGAACTTTTGGATGTCTAAAATGCAAGCAATACTTTCTTACMAAGGCCGARGTAGTWGCTCATACCATCGAGCATGCGAACGATAAAGAAGATTATAATTGCAATGAGTGCCAGAAAACTTTCACAAATGARAACCAATGGGAATTCCATCTACGAATCCATTTTGGCCCTCGACCTCATCATTGTGAACTTTGTGATCGTCGTTTTGCCTTTCACAAACAATTAATAGCYCATGAAATGGAACACAAAAAGCAGTTCCCTTATCAGTGCAAATTTTGCTTGGTCTCTTTCAAAGATCAGGACAAGTATAATTCTCATATGTTRGGCCACAAGCTAAAAARTGAATCTAAAAATGATTCTATCGATGACCAGGAATTTACCGAAGAAATGAARTGCAAAAAATGTCCTCGAGTYCTTCCTGACATTGTGCAACTCCACGCTCACGCCATCAACCAACACGGCGCAAATATACACTGCCAGATTTGTGGTTTTGACGGAGAAGATTTTGCAAGTTTAGCTGCTCATCTCAAAATGCATTTGAATCTCGATTTTGAGTGCCCAGAATGTCCAAAAAAGTTTGCTGATAATACCAGTTTTAATAAGCATCTGGCGAATCATAAAAATGACGCTAAGAAAATGTTTGGATGCGATCAGTGCGATAAAGCTTATGTTGATAGGACAAGGTTAAATTGGCACAAATTAAGCGCTCACAAAGGACTTCGATATATATGTGATTACTGCTCTAGGACCTACACCTCCCTGAAAGGCCTCAAAGATCACATGCAGAATCACATAAAGGTTGATAAAATGGCTTGTGACGAATGTGGTGATTTGTTTATCCTCGAGAGTCACTTGAAGCGTCACAAACAACGAATGCATGCTGATGTRGTKAACATTAAATGTCCTATTTGCTACGCCGTTTACTCAAACGAGTTTCTCTATAATCGCCACAAAAAAGGACATGAGAGCAAAGCTAAAGAGAAACCGACAGCTTTTGTGCGCTGTGTCGAATGTAACAAATTCTTTAAGGGTAAAAAAGCTTTGCGATCGCACGAATTGAACGCGCATTTAAGTGTTGGTCGTTTTGATTGCAATTTATGTGATCACTTCTTCAGAACCGAAAATAGTTTGAAAACTCACATAAGGAATACTCACGAAAAGAAAGAATGGAAATGCTTAGATTGCATAATTCCTTTCCAAACCGAGCAAGAATACGAAGATCATATGGAGAGGCATAAAAGCGAAAGATGGAACAAGAAACCTAARAAAACMAATTATCACGATAAGCCGATTACTTGCGAAGTCTGTGGGCAGTGGACTAGAGGCAAATATTGGTATGATATTCATTATCGAAAACATACTGGCGAGCGACCATTCAAATGTCAATATTGCTCTCTCAGCTTTGTCACTCGTTCAAACATGATCAAACATTCGATGATACACACTCATGAACCWAGTTTCATYTGCACAGTTTGTAATCGYGGTTTTAGGACGGAGAGAACGCTTAGAATTCATATGTATCTTCATACTGGAAAAAGRCCTTTGGAATGTTCAATTTGTGGCAAGGGCTTCGCCACGGCTTACAACCAGAAGATTTGTTTRATTAGACATCAACAGAAAGGAGAGACRATGGAAAATTTTCCRGAGGAAGARAGGGAACTTATTAAGAAGAAAGAGGCGGATAGATTGAAGCTGTCGCAGATTAAAAATGCACTGGTGGCCAAAGTTGGGAGTGGAGAAAAGACCGATTTTATTAAGGTCAAAAAGATGAAAACGATYGAAGAAGAAAGCTCAAATGCGGTCGCATCAATTCARCTCTCTACTCAAGAACCGCAAGTTCAAGTAGCTCAACCTAAAAAAGATCTTTATCTTAATGAATTTTTGAAAAATTTGGAGCATAACAAAACGGAGCCAACTGATGATCAGATWATTTTGTACGAGGARGAAGATGATATCGTGGAAGAAGACAATGCGAGTTTCTCGGATGATCTAATCGAATATGACGCTGGRGAGCCGGAGCCAGATGAGGAGATTTTTGAAGTTGTWGATGTGAAGCCTTCCCAAGCAATTAGAGAGCATGACGAGTTTTTGAAGGCTTATTTGGAAAAAATGGATAGTTTGCCGCCCCCTAARAAGTCCGCKCCAAAGCTCCAAATCATCCACCAAAAACCCAAGAAATACACAAAGGTAGAGATTCTAAACGATGAGCCTTTCGAAAGCAAATTTGATCCAGATGCTGAAGTTGAAACTGAAGAGGTGATCTTTGAGGACGAAAATGTGGAAGGATACGTTGAATACAGTGAAGATAGCCACTCGGTGGTGGATCAAGAGCTTGAAGCAGCTGTGGAAACAATTGATGGAAGTACTAAGCCGACTAAATTGACTGCAAGACAGAGTTACTCTAGGGATCATCATGTTTTTCCAATTTTGCCTGCTATTCCACATGGTAGTAGTGAAGCTCATCTAAAATATGGGTCAAATCGTCAGGGGGCCTCTACTCGTCTTATAAGTCTCCAACACAACAGATGTCAATACTGCAAAATGAAATATAACAATAAGGAAGAGCTAGACGAACATGTCGTGATCGAGCACGTTCCAGAAAGACCCTTTGTTTGTAWTGTCTGCGATTATCGATTTAAACAAAAATGTAAGTTAGATCGACATGCAAGAATGCACACCAAAGAGAAAGCTGCTAAATGTGAAATTTGCTCTAGAGAATTCACTAGGATGGAGAGTTTGACGGCTCACATGAAACTTCACACCAACGAAAAAGGTCATTCCTGTCAAGTGTGCAACAAAAAGTTTAACGATGCCACCAGTTGCACATCTCACACTTTCCTTTGCCTGAAACGTGAAAAGCAAATTGCCGAATCAGGTGCCCAAATTATTGAGTTTCAGAGTTTGGAGGTGATCATCAATTGCATGAATGATACTGACTTGGTGGGACGTTACAAGCTGGATAACTGTGAAATTGTGGATGGCATTAATAAGTGCAAATTCTGCGATAAAACTTTCAAACGCATTGAAAGTCTCACAGAGCACTTAAAAGTCCATAAGATACAAACTTTGCTGGAGAAGTTCCAGTGYAAATATTGTTCGCACACYTTTATTAGCAATGGRCAGTATCAACTACACGTGGCGGCTCATGAGAGAGGAGKTTCCGTTAAGGGACCACCAGGTAGTGCCCATGAAAAGGAAGTTTGCTCGATTTGCGCAAAATTGGTCAAGCGGAGAGAGATGAACGGCCATATCAAGAGACAGCATCCAAGGAAGCTTTACAGATGCCCCGAGTGCAAAAAGTGCCACGCTGAGTACTCCAAACTTAGAAAGCACGTGTTAGCAGTTCACGGCGATCGAGATATCAAGTGCCCATACTGTCCAAAGACATTCGCTACTGTTGAGTCTATGAAAATTCATCAAGCCTACCACGAGAATCCGTTGATACCCTGTCCTCACTGTGGCCTAGAGTTTCAAGAGAGTGGCCTTAAGAGACATATTAAACGTCACGAGTTGGAGAGACCAGAGTGTTGCTCTTATTGCCCAGAGACTTTCAGTAAATATTAA
Protein Sequence: MEDYQGIYQDSDEDYEPPMPKSGVKRIKLESKTSGRPNKALDNLFSQFNDLVSSNKSKNSNTPDQKKXPVVIKLEAGASKNFNTKISNYMKKNATISQPPQNSAVSAKASNSNHVQLALLTAQSQVKNFKCKICDMSFLFETTLEKHLVRHEIDSENPKPVVISKPLSADSKKRRILGVKPRTNFVYYICGCCKIQFLDSDSLMTHEVTHENQDGTFGCLKCKQYFLTKAEVVAHTIEHANDKEDYNCNECQKTFTNENQWEFHLRIHFGPRPHHCELCDRRFAFHKQLIAHEMEHKKQFPYQCKFCLVSFKDQDKYNSHMLGHKLKXESKNDSIDDQEFTEEMKCKKCPRVLPDIVQLHAHAINQHGANIHCQICGFDGEDFASLAAHLKMHLNLDFECPECPKKFADNTSFNKHLANHKNDAKKMFGCDQCDKAYVDRTRLNWHKLSAHKGLRYICDYCSRTYTSLKGLKDHMQNHIKVDKMACDECGDLFILESHLKRHKQRMHADVVNIKCPICYAVYSNEFLYNRHKKGHESKAKEKPTAFVRCVECNKFFKGKKALRSHELNAHLSVGRFDCNLCDHFFRTENSLKTHIRNTHEKKEWKCLDCIIPFQTEQEYEDHMERHKSERWNKKPKKTNYHDKPITCEVCGQWTRGKYWYDIHYRKHTGERPFKCQYCSLSFVTRSNMIKHSMIHTHEPSFICTVCNRGFRTERTLRIHMYLHTGKRPLECSICGKGFATAYNQKICLIRHQQKGETMENFPEEERELIKKKEADRLKLSQIKNALVAKVGSGEKTDFIKVKKMKTIEEESSNAVASIQLSTQEPQVQVAQPKKDLYLNEFLKNLEHNKTEPTDDQIILYEEEDDIVEEDNASFSDDLIEYDAGEPEPDEEIFEVVDVKPSQAIREHDEFLKAYLEKMDSLPPPKKSAPKLQIIHQKPKKYTKVEILNDEPFESKFDPDAEVETEEVIFEDENVEGYVEYSEDSHSVVDQELEAAVETIDGSTKPTKLTARQSYSRDHHVFPILPAIPHGSSEAHLKYGSNRQGASTRLISLQHNRCQYCKMKYNNKEELDEHVVIEHVPERPFVCXVCDYRFKQKCKLDRHARMHTKEKAAKCEICSREFTRMESLTAHMKLHTNEKGHSCQVCNKKFNDATSCTSHTFLCLKREKQIAESGAQIIEFQSLEVIINCMNDTDLVGRYKLDNCEIVDGINKCKFCDKTFKRIESLTEHLKVHKIQTLLEKFQCKYCSHTFISNGQYQLHVAAHERGXSVKGPPGSAHEKEVCSICAKLVKRREMNGHIKRQHPRKLYRCPECKKCHAEYSKLRKHVLAVHGDRDIKCPYCPKTFATVESMKIHQAYHENPLIPCPHCGLEFQESGLKRHIKRHELERPECCSYCPETFSKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -