Pste009455.1
Basic Information
- Insect
- Parochlus steinenii
- Gene Symbol
- Smarcc2
- Assembly
- None
- Location
- scaffold93:237817-243695[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-14 7.4e-11 41.6 0.0 3 44 181 222 179 224 0.95 2 2 8.9 6.6e+03 -3.1 0.1 8 18 442 452 440 453 0.84
Sequence Information
- Coding Sequence
- CTGCCAGAYTTCTTTAACAGCAAAAATAAATCGAAAACTCCTGAAATTTACTTGGCCTATCGCAATTTCATGATTGACACTTATCGGTTGAATCCAACCGAATACTTGACCAGCACVGCTTGCAGACGTAATTTGGCGGGAGATGTTTGTGCTATAATGAGAGTGCATGCTTTTTTGGAGCAATGGGGTTTAATTAACTACCAGATTGATGCAGAGTCGAGACCAACTCCAATGGGACCTCCACCAACCTCWCATTTCCATGTTTTGAGTGACACTCCTTGRGGTTTGCAGCCAATTAACGCTCAGAAAACTCCACAGCCACTAGCAGCTTCCAAGGCTCTCTTGGATTTGGATAAAAAAGCATTGCCAGTTGGTGCTATRCCTATTGTTGGTGGAGCTGAGAAGAAGGATGACGTTACAGGTGTCACAATTAAAACAGAACCTGCTGATGCTTCTGGAAATCAATTTGGTCTGCGTTTGGATCAATATGGAAAGAAACCTGCGGCTCTTAAGAACAAAACTGCTGCWAATATGACCAGAGATTGGACCGATCAAGAYACTTTGTTGTTGCTTGAGGGATTGGAAATGTATAAGGACGATTGGAACAAAGTGTGTGAACATGTTGGATCGAGGACTCAGGATGAYTGCATTTTACATTTCTTGAGGCTGCCAATAGAAGATCCGTATTTGGAGGATGATGGAACATACTTGGGACCACTTGCTTATCAACCAATTCCGTTCAGCAAGGCTGGCAATCCAATTATGTCAACTGTTGCTTTCTTGGCTTCTGTGGTGGACCCAAGAATTGCAGCAAGTGCTGCAAAGGCTGCAATGGAAGAGTTTGCCGCTATTAAGGATGAAGTTCCATCCTCAATGATGGACGCTCACTTCAAAAATGTCGAGACAACAAATAAGGCGGGKAAATTTGATCCTTTTGCTGGTTTGACAACAAGTGGAATTGCGGGAACTGCACCCGAAAAGGAAAAGGAAGATGCACCGGAAGCTGAAAAGACACCTACTGTAGCTTCAGCTGGAGAGGATGTTGAGATGAAGGATGCTAAACCTAAAGACGATGCTACACCTAATGTAGAGGCGTCTAGCGATGCATCTGAAACTAATAAAACGGTGACTGAACCTGAAACGCCATCAACAGATAAGGACTTGGTGAAAACGGAAGATAGTGAGAAAAAGGACGATAAAGCTGATGGAACTGTGGAGGAAATTGGAGAGGGCAGGAAAATTTTCAATGAAGGGAACTTGCAATCTGCTGCCGCGGCTGCTTTGTCGGCGGCTGCTGTGAAAGCAAAGCATTTGGCCGCCGTGGAGGAGCGCAAGATCAAAAGTTTGGTGGCTTTGCTGGTCGAGACTCAGATGAAGAAGTTGGAGATTAAATTGCGTCACTTTGAAGAATTAGAGACGACTATGGAGCGAGAACGTGAAGGATTGGAGTATCAACGTCAGCAGTTGATCCAGGAGCGTCAACAATTCCATTTGGAGCAATTGAAGGCTGCAGAGTTTAGAGCTAGACAACAGGCTCATCAAAGATTCCAGCAAGAGCATGGACAATGGCAGAATCCCAACAATCCTCCGATTATGCCACCACATGGACCACCACAAGCTCAAACTGCAAATATGGCTGTGGCTCAAGCTCCACCAACAATGATAAATCAACCGATTGCTCCGGAAAATGTACAGCAATTGGCGCCACCTCAACCGCAGACTCCAGTTAGTTTGCCTGGCATTCCACCAATTGTTGCTCCACCACCACAACTGGCCACACCAATCGCTGGACCTTAA
- Protein Sequence
- LPDFFNSKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAESRPTPMGPPPTSHFHVLSDTPXGLQPINAQKTPQPLAASKALLDLDKKALPVGAXPIVGGAEKKDDVTGVTIKTEPADASGNQFGLRLDQYGKKPAALKNKTAANMTRDWTDQDTLLLLEGLEMYKDDWNKVCEHVGSRTQDDCILHFLRLPIEDPYLEDDGTYLGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRIAASAAKAAMEEFAAIKDEVPSSMMDAHFKNVETTNKAGKFDPFAGLTTSGIAGTAPEKEKEDAPEAEKTPTVASAGEDVEMKDAKPKDDATPNVEASSDASETNKTVTEPETPSTDKDLVKTEDSEKKDDKADGTVEEIGEGRKIFNEGNLQSAAAAALSAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRFQQEHGQWQNPNNPPIMPPHGPPQAQTANMAVAQAPPTMINQPIAPENVQQLAPPQPQTPVSLPGIPPIVAPPPQLATPIAGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -