Pste009452.1
Basic Information
- Insect
- Parochlus steinenii
- Gene Symbol
- -
- Assembly
- None
- Location
- scaffold93:2156-3942[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-10 3.1e-07 29.6 0.0 3 41 229 268 227 271 0.84 2 3 0.0049 8.2 5.8 0.0 23 35 296 308 283 311 0.89 3 3 2.7e-12 4.5e-09 35.5 0.0 3 38 336 371 335 375 0.92
Sequence Information
- Coding Sequence
- ATGGATAAAAGTTATCTATCACCACAAGCGAAAGATTTAMTAGAACTTTACAAGAATGCTGCTGATGATGTTTATCAGCAAATTACTCTCATCTCTTCGGAAGGACTGGCGGTTTTAGCCAACAGAACAGTATTGGCTATTTCCAGCACCTTTTTATCTTCTCTACTTAAGGAAAATTCTGAATCAACAATTATTCATCTTCCTGATGTGACCTATGACAATCTATGCAAAGTTCTAATGTTGATCTCTTGCGGCAGTATTCCGATTCCAGCTTCGGCCATGGGAGAATTAATTTCAATTTGCAATCTTCTAAAGATCAAAGGAACTATAAATTGTGTGGGAAGCTTCAATGTTTGTATGGAGCCGCCAACAACTTCAACTACTCCAGACATTGGATCAATTCAGATTATCAATCAACAATTTCTGACTAAAAATGAAGTTAAACAGGGAAACGAGGAGCATTTTGAAATCATTAACACTAGCAGCGAGCCAATAGGTGAATGTTGCGAGCCAATGTCCACTGAATTTGAGCTTTACACAATTGATGATATCCAAAACGAAGAAGCAAATGATGTAGCAATTTTGGAAGAGAGCTATGATGAAGAAATTGGAGACGATATTGATTACACTCCTGCAAAATCAGCTCGATCCTTCTCAAAATCTTTTTCTGATGCTGTGGACACGGAAGGTTTTCAAGAAGCACTTAAAATGGTTATTGCTAACAAATTGACATTCAGGCAGGCCGCGGATAAATTTCAGGTATCTAAAACTCTTTTGTGGAGGCACGCAAAAAGACTAGGCTATGAGAAAGGTTCCCTACCCAAAAACTCGTCAAGACTGTTTGCAATGGAAGCCCTAAAAAATGGAGACACTTTACAAACAGTCAGCAAAAAATTCAACATCCCCATTTCCACGTTACACAGAGATAAACTTACGTTGTTTAAGAATGGAAACTTACCTGCCAATGTTAATTTGAACTTGAGGAAAAGAGGCATGGACTTTAAGGAAAGATTGGAAAAGGCAATTGATTCAATTAAAAATGGAAAAAGTCAGAATGAAGCCAGCAAAATCTACGACATTCCTAAAACTACAATATGGCGAAAAATGAAGAAAATAGATGTCAATCTCTGCAAAGATGAAAATGTTGAAGAAAAATTAAAATCTGCTGTCGTAGTGAAGGAAAAGTCTCAAGAAGTTCTGGTAGAAGAAAAACTGTCGTCCAAACCAACAAAAACATATGGCAAAAAGATGAAAAAATAA
- Protein Sequence
- MDKSYLSPQAKDLXELYKNAADDVYQQITLISSEGLAVLANRTVLAISSTFLSSLLKENSESTIIHLPDVTYDNLCKVLMLISCGSIPIPASAMGELISICNLLKIKGTINCVGSFNVCMEPPTTSTTPDIGSIQIINQQFLTKNEVKQGNEEHFEIINTSSEPIGECCEPMSTEFELYTIDDIQNEEANDVAILEESYDEEIGDDIDYTPAKSARSFSKSFSDAVDTEGFQEALKMVIANKLTFRQAADKFQVSKTLLWRHAKRLGYEKGSLPKNSSRLFAMEALKNGDTLQTVSKKFNIPISTLHRDKLTLFKNGNLPANVNLNLRKRGMDFKERLEKAIDSIKNGKSQNEASKIYDIPKTTIWRKMKKIDVNLCKDENVEEKLKSAVVVKEKSQEVLVEEKLSSKPTKTYGKKMKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01160635;
- 90% Identity
- iTF_01160635;
- 80% Identity
- iTF_01160635;