Basic Information

Gene Symbol
Arid2
Assembly
None
Location
scaffold1:565468-580642[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.6e-23 1.3e-19 70.0 0.0 2 89 36 121 35 121 0.94
2 2 2.5 4.2e+03 -2.2 0.6 35 60 1099 1124 1078 1168 0.68

Sequence Information

Coding Sequence
CTGCAGTTGAAGATGGCTACCGAAAACATCGAGCAATTGCTTAATCAAGAAACACCACTCAAGGAACGCATCATTAAGAAAAACAAAAGCTTCTTCGAACGCGATAATCAAAGTTTTTTAAATGATTTGCTCCAATTTCATTCAAATCGTGGAACATCAATTTCCAGATGGCCCAAGTTCAGCGGAAAAAACATAGACTTATACAAATTGTATGAAGCAGTTATTACTCGAGGTGGCTGGATGAAGGTAAACACCAAAGATGAATGGGATGAAGTCCTTACTGAGATTGGATTCACTTTCAAGTGTGTTAACAGTGAAATTGCTTTGAAGCATTTTTATATTCGATTATTTGATAAATATGAAAGAGTCAACTTTCATGGTGAAGAAAAGGAGCGAGTTGATGATGAAGATGATGAAAACAGGCACAAAAGATGGTCAGTTAGGACGTTGCATTCTATTCCAATGAATTACAATTACAATCAGCATAATGTTACAGATCAAGCTCGAGTCCAATACAAACTTTCTACTGATATGCATAACCCTTCTGAATATGACAAGTTGTTGATGTCTTTGCTCTCACCACTTCCTAATGAACAAGATTTTGCTATTAATGTGTGTACTTTAATGTCTAATGAGTGCAAACAAACTTTGAAGGTTGGAAAATGTCCTAAATTGATTATTGTGCTGTTGGCTCATGCTGGCATTTTTGATCATTATTCAATGCGAGAAATGTTCACCGAATTCTACACCAAAGTTCGTCAGCACTCTCAGCAACATTTTTGGCGGGATAGCTTAGTAGACAAACCTGACGTTCTCGAGCTTCTCTTTGATGACTGTTTAAGTGATGAGCAAGTCTTTTTGAACGATGCAAAATCCAAGTTACTTTTAAAAAGTGACGGAGTTGACAATCAAAGTGACTTGGAAGATCTTCACTTCCTTTCTCTAGGTAGAGGACTCGGCACTCAAGACTACATCGGACAAAGAGTCTTACAAGTTGCGCAAATCATTCGTAATTTGAGCTTCAATGAGGAAAATGTATCTTTACTGGCTAAAAATCGAAGTTTAATCAGATATCTTTTGATGTGTTCGAACGTTGAATGGTGCAACATTCATCACATTGGCCTGGATATTTTGGGAAACTTGGCGATGGATTTGGAACTCCAAGATCCTTTTGTAGACAATGTTTCAAGGCAATTATTTGGAACCGTTTCTGATGGACTAGAGTGCAAGGATCGAGGAGTTATTATCAGTTGCTTGGAGATTTTGAGCAAATTGAGTCAAAAGCAATGCAACGAAGAGTTTCTGTTCAAATTTTTGAGAAAAAGTACCCTTCAACAAATCTGCCTCTACTTAACAATAACTGACATTATGCTGTTGCTGTACACTCTCGAGTGTCTTTACTCCCTTACTTCGATGGGCGAGAAGCCTTGCAACATGATGTGTGAAATCCACGGCATCATAGACACAATTGTCTCTTTAATCACAGTCGAAGCACAAAGTTATGGACCAGATGCTTGCATTCTCATGCGAGTTGTTGAAACAGTACCTGGAAGAGCTTTCCAGCAAAATCAGCAAATTCAGACTCAACAAACTCATCAAATTCAACATCCAGTTCATCAAGTGAGGCAAAATATGCCATCTCCTGCAATTCCTCAGCAACAGCAACAAGTGGAACAGCAAAGAGTTGTGCACACGACACCTAAAATTATTATGATGCCAGATAGTCCCAAATCAGACGCTCAGCAGATACTCGTCAATAAACACTCGCAGCAACAAGCGTTGCAGGAAAATGAGCAATTCGCACTTGTTTGGCTTCGTACCACCTTCGAACCGGCAGAAAATCTCTCCTATCGAATTGAAGAGCAAGAAATGTACAAGATGTACATTACAGCAAGCTCCAAAATTGGGAGGAAAGGAGTTTTGTCACCAATGCACTTCCCAAGATGYGTGAGATCTGTTTTTGGTGGAACTACTGGGCCAAATTCTAGCAATCAAGGAGATAAACTTTATTTCTACATGGGCATTAAAATGAGGAATTTGATCAGCACGGCTGTAAAAAATTTGAATCTTTCTGGCCTCGTCGACGACAAATCACAAATAAAGTTGGAACAAGATTCTTCACAAGACGCCATGGACATCAAAGATTCAGCTTTGGCCGCTCAATTAACCAACAAACCTTCAACGTCTAGTGGCTCACTCCTCCAACAAGTCCTCACCAACACTCAGCCAGATCGTAACATGGTTTCTTCACCAAACCAACAAACAATTCCCACTAGTAGCTCATCGCTAATCAAAAGTTTGTTGGCAAACAAGGTAACTTCTAACGACAATGTGACCACTGCTTCCGTAAATTTACCTACTGTGGTCACTTCGAATGCCAATAACATGCATCAGGTCGCACAGAGGCAGTTCACACAAAAACAGAAGCAGTTATCAGAACAACAGGTCATCACAACACAGGCTAATATGGCTAAATCGCTTGTAGTGAACTCTGCTAACCCAAACTTGACCAACATTAAAATTGGTCAATCAACGATTTCAATTAAGCAAGAGCCGGAAAATTCAGCGCCATCTATGAAAGCTGCGGATCTATATGCTAGATTGGCAGTGGATATTTTATCGGATGAAGACGAGGAGATGGATGAGCCACCGGCAACTACGATCATTAAGAAAATGGAGCCACCTGGAAATCAGAGACAGATTATCATGAACAATAATCAAATGATTATTTCACCAGGAAATAATACAAGCACAGCGACTATTAAGACGGATTCTGGAATTCAAACAGTGCCCATTTTGTTGCAAGGATCAAATTCTTCTATGCAGCAATACATTCAACAACCAATGATGCAACAACCAGCTCCAACGCAATACATWTTGGCCACAAACCAACAAGGACAAACWTACGTTGTGGCTCAGCATCARCAACAATCTCACCAAATTCCACAAACCGTTTTACTAGCACAAACTCCTCAACAGCAAGGAACTCAGACAAAGACTATCATTATTCTGCAACAACAACCTGGCCAACAGCAAATGGGACAGCAAATGGGACAACCTAAAATTATTATGACACCACAAGGACAACAAATGATCGTTACACAAATGCCTCGTCAGTATCAGCAACAAGTTCAATACCAGCAGCAAAATGTGATTACAAGCACAGGAAATTTGATCCAGCAACAGCAGCAAAATATGGGTAATCGTAAAATTGTCATCACAAACGAGCAAGGCAAGATGATTCAACAGAATGTCCAGAATGTTCAAAATGTTCAAAATGTGCAGCATGGCCAGCAAGTGTACCAAACTATTCAAACGCAAGGTGGTCAAAACATCCTCGTTCAGAAAGGACAAAAGTTCCAAATTGGAAACACTCAAATCTCCCAAATTATTCAACCAGCCACTTCACAACCTCAGCAAGTTATGCAAGCTCAACAACCTCAGCAAGTAATGCAGGCTCAACAGCCTCAGCAGCAGATGCAAATGATCCAGAAGAAAATGGAGCCAGCTCCTGGTACTAGTACTCAAATGGTTCAAGTTGGACAGAAATATGTGAGCGTGATCGTTTCGGAATCTCAAACAATGCAAGCAAAACCACCTCAGATGATGCAGCAATTTAGTTCGCAAATTCCAATTTCAGTTCAAGCAATGGGAAACCAACAAGAGCCAACAATGTCAACTTCAGGACCGATCGTCACATCCAACATTCTCATTAATCCGCAGAAAGATGAGATTTTGTTTCCAGAAGCTGAAGCTCCGAAGATTGTTGACGAGGCTCCACAGCAAGTTGGAATGGCCAAGCAATCAGTCACTGTTCAGATTCCACAATCTGCTCCACAAGCCAACAATCAATTGTCCCAAACAATTAAAATCATCCCTTCCATGGATCATACGAAGATTGTAGAGGAAGATGTTGAGGTCAGCTGGCAATTCCTTTGTGATTGGAGAGGATGTCCTAAGAAAAAGTATAGGAATGCTAATGAGCTATATTTGCATTGTTGTGCCGTTCATTGTCCGAGACTTGAAGGAAATCCAGACATCTACTGCCAATGGGGCATCGGAATGTGCGATACTCTTCCTCGTAAACGCTTCTCATTGATGACACACATTTTCGATCGTCATTGCACCAACGAAGCTTTAAATATTGCAGTCCAACGAAGAATTGCTGCAGAAGGAAATTCTAATGTTAGGCAACTATGCCCAGTAACGTTGGTTAGAGCGAATCCGCTAGCAAATGATGGAACTCCAGGAGCACATTTAAAGAACGGACCTACAACAATTCAAAATGCTGGAAGCTCAGCAATGCATGCTATTAAGAGGCATGCTGTAGATTTTATGAATGCTAAGGAATTAATGCATGAAGCCGAAGGTCCAGTGACCAAAAGTATTCGTTTGACTGCTGCTTTGATCCTGAGGAACCTCGTCAACTACAGCCATTCTGCTAAAAGGGCAATTCGCTTTCACGAGTCTCGTCTGGCAGCAATTGCCTTGAGTAATGTGGAGTCCAGCAGAACTATCTCCCAGGTTCTATTTGAGATGCATGACACACATCCAATTTAA
Protein Sequence
LQLKMATENIEQLLNQETPLKERIIKKNKSFFERDNQSFLNDLLQFHSNRGTSISRWPKFSGKNIDLYKLYEAVITRGGWMKVNTKDEWDEVLTEIGFTFKCVNSEIALKHFYIRLFDKYERVNFHGEEKERVDDEDDENRHKRWSVRTLHSIPMNYNYNQHNVTDQARVQYKLSTDMHNPSEYDKLLMSLLSPLPNEQDFAINVCTLMSNECKQTLKVGKCPKLIIVLLAHAGIFDHYSMREMFTEFYTKVRQHSQQHFWRDSLVDKPDVLELLFDDCLSDEQVFLNDAKSKLLLKSDGVDNQSDLEDLHFLSLGRGLGTQDYIGQRVLQVAQIIRNLSFNEENVSLLAKNRSLIRYLLMCSNVEWCNIHHIGLDILGNLAMDLELQDPFVDNVSRQLFGTVSDGLECKDRGVIISCLEILSKLSQKQCNEEFLFKFLRKSTLQQICLYLTITDIMLLLYTLECLYSLTSMGEKPCNMMCEIHGIIDTIVSLITVEAQSYGPDACILMRVVETVPGRAFQQNQQIQTQQTHQIQHPVHQVRQNMPSPAIPQQQQQVEQQRVVHTTPKIIMMPDSPKSDAQQILVNKHSQQQALQENEQFALVWLRTTFEPAENLSYRIEEQEMYKMYITASSKIGRKGVLSPMHFPRCVRSVFGGTTGPNSSNQGDKLYFYMGIKMRNLISTAVKNLNLSGLVDDKSQIKLEQDSSQDAMDIKDSALAAQLTNKPSTSSGSLLQQVLTNTQPDRNMVSSPNQQTIPTSSSSLIKSLLANKVTSNDNVTTASVNLPTVVTSNANNMHQVAQRQFTQKQKQLSEQQVITTQANMAKSLVVNSANPNLTNIKIGQSTISIKQEPENSAPSMKAADLYARLAVDILSDEDEEMDEPPATTIIKKMEPPGNQRQIIMNNNQMIISPGNNTSTATIKTDSGIQTVPILLQGSNSSMQQYIQQPMMQQPAPTQYILATNQQGQTYVVAQHQQQSHQIPQTVLLAQTPQQQGTQTKTIIILQQQPGQQQMGQQMGQPKIIMTPQGQQMIVTQMPRQYQQQVQYQQQNVITSTGNLIQQQQQNMGNRKIVITNEQGKMIQQNVQNVQNVQNVQHGQQVYQTIQTQGGQNILVQKGQKFQIGNTQISQIIQPATSQPQQVMQAQQPQQVMQAQQPQQQMQMIQKKMEPAPGTSTQMVQVGQKYVSVIVSESQTMQAKPPQMMQQFSSQIPISVQAMGNQQEPTMSTSGPIVTSNILINPQKDEILFPEAEAPKIVDEAPQQVGMAKQSVTVQIPQSAPQANNQLSQTIKIIPSMDHTKIVEEDVEVSWQFLCDWRGCPKKKYRNANELYLHCCAVHCPRLEGNPDIYCQWGIGMCDTLPRKRFSLMTHIFDRHCTNEALNIAVQRRIAAEGNSNVRQLCPVTLVRANPLANDGTPGAHLKNGPTTIQNAGSSAMHAIKRHAVDFMNAKELMHEAEGPVTKSIRLTAALILRNLVNYSHSAKRAIRFHESRLAAIALSNVESSRTISQVLFEMHDTHPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-