Pste012663.1
Basic Information
- Insect
- Parochlus steinenii
- Gene Symbol
- retn_1
- Assembly
- None
- Location
- scaffold497:70750-81711[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-26 1.3e-22 79.6 0.0 2 89 16 101 15 101 0.96 2 2 6.7 1.1e+04 -3.6 0.0 24 38 178 193 164 194 0.63
Sequence Information
- Coding Sequence
- ATGTCTGAATGGAGTCAACTCTACGAAATTAATGATGATCCAAAGCGTAAGCTTTTTTTGGATGATTTATTTCTGTTTATGCAGAAAAGAGGTACACCGATTAACCGACTGCCAATTATGGCTAAATCAGTATTAGATTTGTATGAACTATACAATTTGGTTATTGCACGTGGTGGACTAGTGGATGTTATCAATAAAAAACTTTGGCAAGAAATCATTAAAGGGTTGCATTTACCATCAAGCATTACGAGCGCTGCATTTACATTGCGTACACAGTACATGAAGTATTTGTATCCATACGAGTGCGAAAAGAAAAACTTAAGCAGCCCATCTGAATTACAGGCTGCAATTGATGGTAATAGAAGAGAAGGGAGGCGATCTAGTTATGGTCAGTTTGACTCACAGATGCAAATGCAACAAGTACAGAGATCACCAGTTCCCACAAGTTTACAACAAATGTCTCCACTGTCTTTGGTGACGCATGGCAATTCTAACAGGTTAATGGCTGCTCCACAAATGCCAAATATTGTTCCACACGAGATTGAACAACGAATGTTGGAATACATTAAGCTTTTTCAGACTCCAAAAGATATTAAAAGACAAAGTCCCGAAACAATTCCAAGAGATGCACTGAATGCTTTAGAAATGTCACGAATGGCAATGTGGAATAGTTTATACAATAACAATATGAGCCCCACTAATCATTTTACTCCACCAGATATACAAAGAGAGGTAAAACCAATCCAACGAGAGGCACTGAATCTTTCAGATTCTCCACCACCACCACCACCATCAACACAAACACACATTTCAATTAAGAGAGAAAGGGATACGCACAACGATCACAATGAAATTGTACCACCATCCAAAAGAGGCTTGATTTCGAACCATAGCCTCCATAACTCAGGACGTAGGGCATCCAATCTAAACAACAATAATATTCAACTGTTGAATAACAATCATACTCCTAGCAAAAAAGACCATTCCATTAGATCAGAATCTCCAAACAATTCGGCTAATGGAGAACCTCAACTTGTAGTTAAGTTGGAAGTAAATGGCACTCTATTTGAAGGTGTACTATTTGCTAATCCATCAAGTTCATCGTCGTCTGCTTCCATTGAGTCACCTACAAGTAGATCGACTAGTTCAGCTAACCTGATGAGTTCTCCGAACGGAAACACGAGCTCTATTGAGCAGCACAGTTCTCATACATTAATATCATCTTAA
- Protein Sequence
- MSEWSQLYEINDDPKRKLFLDDLFLFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSSPSELQAAIDGNRREGRRSSYGQFDSQMQMQQVQRSPVPTSLQQMSPLSLVTHGNSNRLMAAPQMPNIVPHEIEQRMLEYIKLFQTPKDIKRQSPETIPRDALNALEMSRMAMWNSLYNNNMSPTNHFTPPDIQREVKPIQREALNLSDSPPPPPPSTQTHISIKRERDTHNDHNEIVPPSKRGLISNHSLHNSGRRASNLNNNNIQLLNNNHTPSKKDHSIRSESPNNSANGEPQLVVKLEVNGTLFEGVLFANPSSSSSSASIESPTSRSTSSANLMSSPNGNTSSIEQHSSHTLISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -