Basic Information

Insect: Parnassius orleans
Gene Symbol: -
Assembly: GCA_029286625.1
Location: JAGSMP010000002.1:2032653-2040060[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.29 72 6.1 4.4 2 22 191 211 190 211 0.96

2 15 0.14 34 7.1 0.5 2 23 467 488 466 488 0.96

3 15 0.016 3.9 10.1 1.0 2 23 569 590 569 590 0.96

4 15 0.3 76 6.0 0.5 1 23 598 620 598 620 0.95

5 15 3.6 9.1e+02 2.6 2.6 1 23 653 675 653 675 0.93

6 15 5e-05 0.013 17.9 4.2 1 23 683 705 683 705 0.99

7 15 0.055 14 8.4 2.0 1 23 788 810 788 810 0.99

8 15 0.11 27 7.5 2.3 1 19 866 884 866 888 0.93

9 15 9.2 2.3e+03 1.4 0.7 1 23 894 916 894 916 0.91

10 15 0.013 3.3 10.3 0.5 1 23 984 1006 984 1006 0.93

11 15 0.011 2.8 10.5 0.9 1 23 1012 1034 1012 1034 0.95

12 15 0.0048 1.2 11.7 2.6 1 23 1122 1144 1122 1144 0.97

13 15 0.00012 0.03 16.7 1.4 1 23 1150 1172 1150 1172 0.99

14 15 1.1 2.8e+02 4.2 1.3 1 23 1263 1285 1263 1285 0.96

15 15 0.013 3.2 10.4 2.7 1 23 1296 1318 1296 1318 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.29	72	6.1	4.4	2	22	191	211	190	211	0.96
2	15	0.14	34	7.1	0.5	2	23	467	488	466	488	0.96
3	15	0.016	3.9	10.1	1.0	2	23	569	590	569	590	0.96
4	15	0.3	76	6.0	0.5	1	23	598	620	598	620	0.95
5	15	3.6	9.1e+02	2.6	2.6	1	23	653	675	653	675	0.93
6	15	5e-05	0.013	17.9	4.2	1	23	683	705	683	705	0.99
7	15	0.055	14	8.4	2.0	1	23	788	810	788	810	0.99
8	15	0.11	27	7.5	2.3	1	19	866	884	866	888	0.93
9	15	9.2	2.3e+03	1.4	0.7	1	23	894	916	894	916	0.91
10	15	0.013	3.3	10.3	0.5	1	23	984	1006	984	1006	0.93
11	15	0.011	2.8	10.5	0.9	1	23	1012	1034	1012	1034	0.95
12	15	0.0048	1.2	11.7	2.6	1	23	1122	1144	1122	1144	0.97
13	15	0.00012	0.03	16.7	1.4	1	23	1150	1172	1150	1172	0.99
14	15	1.1	2.8e+02	4.2	1.3	1	23	1263	1285	1263	1285	0.96
15	15	0.013	3.2	10.4	2.7	1	23	1296	1318	1296	1318	0.98

Sequence Information

Coding Sequence: ATGGGTTTACAATATGCGGAAAGAGATATAGTTAGTTGTAATAGTGACTCTAATGACGCCGTTGCTTTTGAAGCATTTGCCAGGAACGCACAGAATTGTCAATCTATTAATGCAGTATCGGAAGAATTAAAGTCACAAAAACAATGCAGAAAGATACCCAGACCAATACCACAGCTCATACCTTTGAATTCATCGACTccaaatcaaaacaaaaattcGTCAGGTGAACCGCCTtcgaaaaaatttaaagaaacattTTCCAGTGATTCTCCAGAATCAAGTAATTCAAATAAGTTAGATAATTTACCAACAGATGTCATATCTACATCAATGATTAACAACGTTCCCAATAATGCAAAAGAAACATTCGTACGCAAGAAAAACGAATCATTTTTTGATAAGTTAAAAGAGAGGTTGTTGACAGAGACAGGTGAAGAAGGAtctttaaaatgcaaaaattgCGGATTTGAAAGCAAATGCTTATCTGAGCATTCAGTACATGAAAAAACTTGCACCACACAATCAAGTCGAATTCCAACAAATACGGCGATGTCAAGTTTAGGTTCGACAAGATGTCAAAACTGCAGGCATAGATGTAAATCGAGCGCAGATCTGTACATGCATATGAAAACTTGCCAGAAAAACGAAAATGGACCAAAACAAATTCCAGCGGAAACACAAAATCAAGATAGCAATGAAGCTGTGCACCCGAATCCGGAGAAAGATAGCGAGCCGCATCCTATGGAGAACGTAGTTTTCGtttggaataatatcaatagagAGGCAAGTAAATTCGACACGCCGCTAGATATAAGTATCAATGATGACTCTACGCTTCCAGAACCTCCTCAAAGTTTCGACTCGGAAATCGTAGACGAAAATGAAGGTATGAATTTATCACCAAGTCAAGCTGTTGGAAAGAAAGTTTTCAAATGCCCCCACTGTTTGTTTTGGGCAGCGACGGCATCTAGATTTCATGTACACATTGTTGGGcatttaaataagaaaccatTTGAATGTTccttatgtaaatataaatctaaTTGGAGATGGGACATAACGAAGCACATAAAACTGAAGTCTGCAAGAGATCCTGATCACGCTGAAGCAAAAGTACTCATGACAGATGAAACTGGTAGAAGGAATTATAGCAAATACAATAAATTCTTAGCAATGCCAGTCTTAAATGAAAATGGTGAAAACGAATTTCATTATATAGACCAGAATACAACACTTGATGCTTCTCTAGAAATAGATGATTCATACAATGACATTAATGAAGGTTCAATCCCATCTATGGAGATGCAGCCTCTTAACTTGCACGCACAACACAgtgaacataaatataatattgacaaTAGAAATCAAGACTTAAAAAGACCAAAAAAGACATTATGGAAATGTAAAAAATGCAATTACAGAGACTCGTCAAAAGAAGCTTTATTAGAACATGTCAGGGAACATTCGAAACCAGAATCTGGTTTGGACGACACAAAATCTCAGAGTTCTATGAACAAAAAACCTGAAAATACACCAGATCCTGCCGACTTAGCGTACCGTTGTGGTCACTGCAATCAACTATCAAATTGGAAGCATGTCATACagAGACATTGCAGACTGAAACATGACGGAGTAATAAAAGTCATCACTACAGTTAAACCGAAAGTAGAGGGTTCGAGTTCGACAAACGAAACAATTGCCGAGTCTTGTACGAAGTGTCCATTTAAAACTAACGACAGGACCATGCTAATCATACACATGCAGCAACACCAACCCTCGCctcaatcaatatttaaatgctATTTCTGTCCTTTCTTCGTTAAAGATGAACAGGAATTAGTTCAACATCTCGTTCTACATGGTATAACTGACCCCGAAGACTATATAGCAAAAGCAATGGGTTGCAAGTCGCCTTTACCCGACCAGCAAGGATCGCTATCAAGCGCTTCAAAGCGACACAAGTGCATAGAATGTCCTTACGAAACAAACAGTAAATCTCAATTCATGTACCACGAGCAATTTCATCGTCTCCCTGCGGACACTCCTTACAAATGTCCAGAGTGTAACTATAGCGTTTCGAAAAGACATCTACTTCATCAACATATGAGAGTTCACGGTATAATAccgaaaaaaaatgaaatggaaTCAGACTTTGAAGCAGCCGCAACGAATTCTTACAagacagaaaataaaatagatttcaaCCTTGAAGAAATTCCCTATGTATGGGTTTCAGCAAAGAATgaatttcataaaatgtataaatgccGTTATTGTTCATATGTTAATACTCAAAAATGCAAAATACCCAATCACGAGAAAATTCACTGCATTGTATTTGGAAACAACGAAATATTAGTGTATAAATGTTTAGATTGTAAATTTACATGCGACAACGCTGGAAGATTAGCTGATCATTCTAAAACACATGGTGAAATATATGGACGTATTTATTGTCCCGTTGAAGATGATATTCCAGATGATGAACAGATAGCAAAATTACGAAAAGTAATAGAAAGAGAGAAATTAAACATGACACAGGAATTTTCAAAAGATGACGGTTTAGGGactgaaaataaagaaattaaaacgtTATATTTTTGTCAGAAATGTCCAACACGTTACTTTACAGAGAGTGAACTAAAAGTTCATGACAAATTTCATGATCTCGCATTTACACACAAATGTAAAAGTTGTGAATTTTCTGTTTTACAAGAAAGTGAATTAGCTGCTCACTCATTTGTTCACTCAGATGAATAtcatactaaaactaaaatgcTTAAATTCATTCACAATACGCATCCAGCACACACCGAACCTCGTTTAGAGGTTGTTCATTGCCCAGCAACTTCTGAAATAACCTGGATTGTAACCAATCCCGGCACCAATTATGAAGTCATAAATACTTCACATAGAAAATTcaatgaaggaaaacatgtTCCAAAGCAATATCTATGCAAAGAGTGTCCAGCAAAATTCTTTAAGACCTCAGCCCTGAATTATCATATGGGACTACATGGTGGAGATGGTGACCACAAATGTAAAAAATGCAGTTATGCTGTTAAAAATATAGGAAATTTGGCCAAACATGAAATACTACACGAAAAAGAAGGTAAAACAACTTGTGACTATGAATCCGGAGAGGACATGGATTACAAAATTCCTTTATCCGGAACTGACCTATTTCAAAGAAAGACTGAAGCACAAAAAAGAGTCTTGAATGACAAAGATAAATTAGTGAAACCTAACGATCACTTTCCACCTGTACTTCAAGCCGATCCTCAGTTCGGATATTTGATGCATGGTAACCCAGAGTTTATATATCCAACATATCTTAAAAATGGACGTCAAAAAGAAAAACGTTACAAATGTCACAAATGTCCATCAGCCTTTGAAAAAAGAGAGCAATATAAAATTCACTTATCACTACATGGTTCTAAACAGAGATATAAGTGTGAACTTTGCGATtattctgtcaaatattatgcAAATTATGTTCAACATATGAGAAAACATCAAAAGAATGATGAAGCTCAAGCTGAAAGAAGGAAAGAAACCAATGGCGTTCCAGAAACAGAATCATCTGGAAACAAAGAAGATGAAAGTACTGACAATATTAAACTAGCTATTAAAACTATGCCTAGGGGAATAccaaaaagtgactttcaacaATTTTCAATCAGTGATCAACAAACTTTGAGACTATTACAACGCAGGAGTTCTTTCAATAATACTGCAAATGATGCAAACCAAACCGATACTACACCTACAAAAGACCGAAAATTACATCCATGTTTCTTGTGTCCATATACAAATCAGCGACAAGATGCACTGGGAAATCATTACAGGAGGCATGATAAAAATGACATTTTTAACAATGGAAACCATAAATGTTCCTTCTGTGACTTGGCTGTGGTTCAGGCACACTTCCTTCGGGAACATTTGAAGACACATTTTAATTATCAGAAATCACTTACACCTGAGTGTTATGTGGCCAATGAAGATGTTAGATTTACTATTACAAAATTggatgatgaaaataatacaactGATCTCAAATTAGATATGCAAAATAAAACAGATTTGTGCAATGACgaaaaaatttttgttaaaataaaaacaggagAATTATTGGTAGAATAG
Protein Sequence: MGLQYAERDIVSCNSDSNDAVAFEAFARNAQNCQSINAVSEELKSQKQCRKIPRPIPQLIPLNSSTPNQNKNSSGEPPSKKFKETFSSDSPESSNSNKLDNLPTDVISTSMINNVPNNAKETFVRKKNESFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKTCTTQSSRIPTNTAMSSLGSTRCQNCRHRCKSSADLYMHMKTCQKNENGPKQIPAETQNQDSNEAVHPNPEKDSEPHPMENVVFVWNNINREASKFDTPLDISINDDSTLPEPPQSFDSEIVDENEGMNLSPSQAVGKKVFKCPHCLFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPDHAEAKVLMTDETGRRNYSKYNKFLAMPVLNENGENEFHYIDQNTTLDASLEIDDSYNDINEGSIPSMEMQPLNLHAQHSEHKYNIDNRNQDLKRPKKTLWKCKKCNYRDSSKEALLEHVREHSKPESGLDDTKSQSSMNKKPENTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKVEGSSSTNETIAESCTKCPFKTNDRTMLIIHMQQHQPSPQSIFKCYFCPFFVKDEQELVQHLVLHGITDPEDYIAKAMGCKSPLPDQQGSLSSASKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHMRVHGIIPKKNEMESDFEAAATNSYKTENKIDFNLEEIPYVWVSAKNEFHKMYKCRYCSYVNTQKCKIPNHEKIHCIVFGNNEILVYKCLDCKFTCDNAGRLADHSKTHGEIYGRIYCPVEDDIPDDEQIAKLRKVIEREKLNMTQEFSKDDGLGTENKEIKTLYFCQKCPTRYFTESELKVHDKFHDLAFTHKCKSCEFSVLQESELAAHSFVHSDEYHTKTKMLKFIHNTHPAHTEPRLEVVHCPATSEITWIVTNPGTNYEVINTSHRKFNEGKHVPKQYLCKECPAKFFKTSALNYHMGLHGGDGDHKCKKCSYAVKNIGNLAKHEILHEKEGKTTCDYESGEDMDYKIPLSGTDLFQRKTEAQKRVLNDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQKNDEAQAERRKETNGVPETESSGNKEDESTDNIKLAIKTMPRGIPKSDFQQFSISDQQTLRLLQRRSSFNNTANDANQTDTTPTKDRKLHPCFLCPYTNQRQDALGNHYRRHDKNDIFNNGNHKCSFCDLAVVQAHFLREHLKTHFNYQKSLTPECYVANEDVRFTITKLDDENNTTDLKLDMQNKTDLCNDEKIFVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01157329; iTF_00197750;
90% Identity: iTF_01157329;
80% Identity: -