Basic Information

Insect: Parnassius orleans
Gene Symbol: -
Assembly: GCA_029286625.1
Location: JAGSMP010000224.1:531626-560736[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.045 11 8.6 0.6 1 23 164 187 164 187 0.94

2 15 1.2 3e+02 4.1 0.2 1 12 260 271 260 274 0.87

3 15 9.1 2.3e+03 1.4 1.8 1 11 503 513 503 516 0.88

4 15 1 2.6e+02 4.3 0.1 1 12 576 587 576 592 0.87

5 15 0.37 92 5.8 0.1 1 13 610 622 610 631 0.84

6 15 0.21 52 6.5 0.3 1 14 781 794 781 795 0.87

7 15 1.4 3.5e+02 3.9 0.4 1 19 1209 1226 1209 1228 0.78

8 15 8 2e+03 1.6 0.1 8 21 1415 1428 1414 1429 0.92

9 15 0.0004 0.1 15.1 0.8 2 23 1442 1463 1441 1463 0.94

10 15 0.00034 0.087 15.3 0.3 1 23 1468 1490 1468 1490 0.98

11 15 3.7e-05 0.0094 18.3 3.5 1 21 1499 1519 1499 1524 0.95

12 15 0.0074 1.9 11.1 1.6 1 23 1532 1555 1532 1555 0.87

13 15 0.0016 0.41 13.2 0.2 1 23 1561 1584 1561 1584 0.96

14 15 0.012 3.1 10.4 0.4 3 19 1598 1614 1596 1615 0.91

15 15 0.01 2.6 10.6 1.1 1 23 1628 1651 1628 1651 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.045	11	8.6	0.6	1	23	164	187	164	187	0.94
2	15	1.2	3e+02	4.1	0.2	1	12	260	271	260	274	0.87
3	15	9.1	2.3e+03	1.4	1.8	1	11	503	513	503	516	0.88
4	15	1	2.6e+02	4.3	0.1	1	12	576	587	576	592	0.87
5	15	0.37	92	5.8	0.1	1	13	610	622	610	631	0.84
6	15	0.21	52	6.5	0.3	1	14	781	794	781	795	0.87
7	15	1.4	3.5e+02	3.9	0.4	1	19	1209	1226	1209	1228	0.78
8	15	8	2e+03	1.6	0.1	8	21	1415	1428	1414	1429	0.92
9	15	0.0004	0.1	15.1	0.8	2	23	1442	1463	1441	1463	0.94
10	15	0.00034	0.087	15.3	0.3	1	23	1468	1490	1468	1490	0.98
11	15	3.7e-05	0.0094	18.3	3.5	1	21	1499	1519	1499	1524	0.95
12	15	0.0074	1.9	11.1	1.6	1	23	1532	1555	1532	1555	0.87
13	15	0.0016	0.41	13.2	0.2	1	23	1561	1584	1561	1584	0.96
14	15	0.012	3.1	10.4	0.4	3	19	1598	1614	1596	1615	0.91
15	15	0.01	2.6	10.6	1.1	1	23	1628	1651	1628	1651	0.98

Sequence Information

Coding Sequence: ATGAGCCGTCTATCTAGTACGACGATTTCTTCCGAGCCCATATTAGCCCCATTAAAGGAAGAGGAACAGCTTTGTTTAGACATAGATGTAGTCAAGATTgaagctgatgatactaaaTGTGATGCTGATATTTGTGAACCTGTATTGGACACCCCACAGTCTCCTAAATTAGAGGAAGCAACAGATGTCTTTATTGATGATGGTGAATTTCTTGAAGCGATTCCATCACCAGATCAGGAAGCGTCTGATGATGATGTCCTATTGTCAAacttgaagaaaaaaaagaaaagaggaAGGAAAAGCAAGAAGGAGAAgagtaaaagaaagaaaaagggtGATGTAGAGCAGAAAGAAGAAGAACAGCCACTGAAGCATTCGAGAAAATTGAAGAACTTGCCAGATTTTGTGGAGTTGTACACAATGACCGAAGAGGAGATGTGGAGGATAAGGGCGGAGGATGTGGCCCGGAAGGAGTTCGTGGAACTCAAATACAAGTGTGAAGATTGTGTTATTGCCTTCAATACAGAGAAACTTATGAATTACCATAAGAATGGAAAACACCGACCGTGCACCGCGCGCTACACCTGGCCGCGTACCGCTGCCGCGCGTGCGGCGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGAGTATTGTGCACGTGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGCACCGCACCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGAGTATTGTGCACGCGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACCGCACCGCCCACGCCTGTCCCACCTGTGCGGCAGTTCACGTGAGTATTGTGCACGCACGCGCACCACGCCCGCGACCGTGCTGCGGCACGCCTGTGCACTGCACTCGCCCACGCCTGTCCCACCGGGCAGCAGTTCACGTAGTATTGTGCACGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCGCCCACGCCTGTCCCACCTGGGCAGCAGTTCACGAGTATTGTGCACGTGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCCGGGCAGCAGTTCACGTGAGTATTGTGCACGCACGTGCACCACGCTCAAGCGACCGTGCTGCGGCACGCCTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGAGTATTGTGCACGTGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGAGTATTGTGCACGTGCACGTGCGCACCACGCTCGCGGACCGTGCTGCGGCACGCCCTGCACGCACCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGGAGTATTGTGCACGTGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGAGTATTGTGCACGTGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGAGTATTGTGCACGCACGCGCACCACGCTCAAGCGGACCGTGCTGCGGCGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACCAGTTCACGTGGTATTGTGCACGTGCGTGCGCACCACGCTCAAGCGGACCGTGCCGGCACGCCTGTACTGCACCTCGCCCGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGGTATTGTGCACGTGCGTGCGCACCACGCTCAAGCGGACCGTGCTGGCACGCCTGTGCACTGCACCTCGCCCGCCTGTCCCACCTGTGGGCGGCAGTTCACGtggtgtgcgtgcgtgcgcacCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCACCTGTGGGCAGCAGTTCACGTGATATTGTGCACGTGCGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTACCTCGCCCGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGGTATTGTGCGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCACGCCTGTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCGGCAGTTCACCAGTTCACGTGAGTGTGCACGTGCGTGCGCACCGCTCAAGCGGACCGTGCCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGAGTATGTGTGCGAGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTAGTATTGTGCACGTGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCGCCTGTCCCACCTGTGGGCAGCAGTTCACGAGTATTGTGCACGTGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGAGTATTGCGCACGTGCACGAGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGGTATTGTGCACGTGCGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCGGCAGTTCACGTGAGTATTGTGCACGTGCGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTAGTATTGTGCACGTGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGAGTATTGTGCACGAGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGGTATTGTGCGTGCGTGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGAGTATTGTGCACGTGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGAGTATTGTGCACGTGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACTATTGTGCACGTGCGAGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCGCCTGTCCCACCTGTGGGCAACAGTTCACGTGAGTATTGTGCACGTGCGTGCGCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGAGTATTGTGCACGAGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACGTGAGTATTGTGCACGTGCACGTGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACTGTGCACTGCACCTCGCCCGCCTGTCCCACCTGGGCAGCAGTTCACGTGAGTATTGTGCACGAGCGCACCACGCTCAAGCGGACCGTGCTGCGGCACGCCTGTGCACTGCACCTCGCCCACGCCTGTCCCACCTGTGGGCAGCAGTTCACCACAAAATCCAAGTTAGTGTACCACCGAAGCGTGTGCCATCAGGAGCGACCACAGTGCGATTGCTGCGGAAGGTGTTCGCCAACAAAATGACCCTGAAATATCATTTAAAAATACTCCCTCAGAGTAAACCCAAAGAGAAACTCCATTTACCTTGCAAAGGCTGTGACAAAGTGTTCCACTCTAAGAAGAGTTACAGAGCCCAtgtAGTGATTCACAACGGGCTAAAGTATCCGTGCCCGATTTGCGGCAAACTTTTCATGTGGAAACGCAACCTCGCCCGACATACTCGCAACCATCGCGAAAAGGACGAGGGAGCGCTCTACGAATGTAGGGACTGCGGGAAGAGCTTCGCGAGTCGCGACTGCTACAAGAATCACATGCGGCTCAGCAAGCGACATGTGCCCGAGGACGCGTATATccaCGCGTGCAGTTACTGTGGGAAGAAGTTCGCCACGAAATGGTGCATGGTGGACCACGTGGACTGGGACCACCTGAAGCTGATCAAGTACCAGTGCAATGTTTGTTTTAAGCCCTTTAAAACGGCAAAGATCTTGGTGGCACATATAAACAATATTCACCAGGGAAAGAAGAACAAGGAACCTGAGGGAGAGCACCTCTGCGAGATATGCGGGAAGTCGTACAAGTCGGCGAAAAGATTAAAGGGCCACGTGTGGGCCATGCATACTAATCGGTCCGCGTCGAAAAGCTATAAGTGCAAGTTGTGCCCGGCCACCTTCACGTGGCAGACCTCAATCTACAAGCATATGAAGATGATGCATGACAACAACAAGCGCACGAAGCAACCCCGACCGATACCACCGGTAAAGAAGCAGGAGCCCTACCCGGATATCGAACTGGCGAACAGAATGCAGTACTTCCAGCAGAATCTCGCGAACAATTTAGTTCAAAACATGGTGCAAGCTCAACCGGTCCCTATtaatattgttcaaaatattgtttaa
Protein Sequence: MSRLSSTTISSEPILAPLKEEEQLCLDIDVVKIEADDTKCDADICEPVLDTPQSPKLEEATDVFIDDGEFLEAIPSPDQEASDDDVLLSNLKKKKKRGRKSKKEKSKRKKKGDVEQKEEEQPLKHSRKLKNLPDFVELYTMTEEEMWRIRAEDVARKEFVELKYKCEDCVIAFNTEKLMNYHKNGKHRPCTARYTWPRTAAARAACAPRSSGPCCGTPVHCTSPTPVPPVGSSSREYCARARAHHAQADRAAARLHRTAHACPTCGQQFTSIVHAHVRTTLKRTVLRHACAPHRPRLSHLCGSSREYCARTRTTPATVLRHACALHSPTPVPPGSSSRSIVHARAHHAQADRAAARLCTAPPTPVPPGQQFTSIVHVHVRTTLKRTVLRHACALHLAHACPTRAAVHVSIVHARAPRSSDRAAARLHCTSPTPVPPVGSSSREYCARARAHHAQADRAAARLCTAPRPRLSHLWAAVHVSIVHVHVRTTLADRAAARPARTAHACPTCGQQFTEYCARARAHHAQADRAAARLCTAPRPRLSHLWAAVHVSIVHVHVRTTLKRTVLRHACALHLAHACPTCGQQFTSIVHARAPRSSGPCCGACALHLAHACPTCGQQFTSSRGIVHVRAHHAQADRAGTPVLHLARLSHLWAAVHVVLCTCVRTTLKRTVLARLCTAPRPPVPPVGGSSRGVRACAPRSSGPCCGTPVHCTSPTPVHLWAAVHVILCTCVRTTLKRTVLRHACALPRPPVPPVGSSSRGIVRTCAPRSSGPCCTPVHLAHACPTCGRQFTSSRECARACAPLKRTVPARLCTAPRPRLSHLWAAVHVSMCASAPRSSGPCCGTPVHCTSPTPVPPVGSSSRSIVHVHVRTTLKRTVLRHACALHLARLSHLWAAVHEYCARARAHHAQADRAAARLCTAPRPRLSHLWAAVHVSIAHVHERTTLKRTVLRHACALHSPTPVPPVGSSSRGIVHVRAHHAQADRAAARLCCTSPTPVPPVGGSSREYCARACAPRSSGPCCGTLCTAPRPRLSHLWAAVHVVLCTCTCAPRSSGPCCGTPVHCTSPTPVPPVGSSSREYCARAHHAQADRAAARLCTAPRPRLSHLWAAVHVVLCVRAPRSSGPCCGTPVHCTSPTPVPPVGSSSREYCARARAHHAQADRAAARLCTAPRPRLSHLWAAVHVSIVHVHVRTTLKRTVLRHACALHLAHACPTCGQQFTIVHVRAHHAQADRAAARLCTAPRPPVPPVGNSSREYCARACARSSGPCCGTPVHCTSPTPVPPVGSSSREYCARAHHAQADRAAARLCTAPRPRLSHLWAAVHVSIVHVHVRTTLKRTVLRHCALHLARLSHLGSSSREYCARAHHAQADRAAARLCTAPRPRLSHLWAAVHHKIQVSVPPKRVPSGATTVRLLRKVFANKMTLKYHLKILPQSKPKEKLHLPCKGCDKVFHSKKSYRAHVVIHNGLKYPCPICGKLFMWKRNLARHTRNHREKDEGALYECRDCGKSFASRDCYKNHMRLSKRHVPEDAYIHACSYCGKKFATKWCMVDHVDWDHLKLIKYQCNVCFKPFKTAKILVAHINNIHQGKKNKEPEGEHLCEICGKSYKSAKRLKGHVWAMHTNRSASKSYKCKLCPATFTWQTSIYKHMKMMHDNNKRTKQPRPIPPVKKQEPYPDIELANRMQYFQQNLANNLVQNMVQAQPVPINIVQNIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -