Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_029286625.1
Location
JAGSMP010000119.1:49372-69868[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.9e-07 0.002 20.2 0.0 2 35 293 329 292 334 0.86
2 2 2.1e-10 7.1e-07 31.2 0.1 2 43 374 420 373 422 0.87

Sequence Information

Coding Sequence
atGCGCTACGTTATTATCGTACTTTTGGTATTTATCATAAGTGTAGCGGCATGGGACGACGACGATTTAGAAGTTTTTGACGTGGTGGAAGAAGTGAACCAGAATTTCTACGAATTATTAGGTGTTACGCaggaAGCATCACAATTAGAAATTAAAACAGCATTTAAAAAGCTCACTTTGAAGCTACATCCTGATAAGAATAATGCTCCAGATGCAGATGTGCAGTTCAGAAACTTGGTTTCCGTGCACAATATTCTTAAGGATCCAggaaaaagagaaaaGTATAACGAAGTACTCAAAAATGGTCTTCCAAATTGGCGTTCTgctgtatattattatagacaTGTGAGGAAAATGGGCTTAGCTGAAGGCTCCATAAtccttttcattattatttcatttggCCAATATGCAGTTGGTTGGGCCGCTTATGTTGAAAAGAGGTTTACTGctGAGCAAATATTAAGTAGTAGAGGAAAACGGCAAAAGAAATCAGGATTTGATACAGGCTTAGCAGAAATATTAGAACAACTGCCAAAACCTAGCGTAAAAGACACATTGCCGTTTCAAATACCAAGGTTTCTTTGGTGGTCTATAATTGCTATTCCTCGAGGGATCATGGAGGTGAAGAGAAAAATGAAGGAGCGAGAAGAGGAAGCAAAAAGACAGAAAAAGAGGGAGGAAGAGGAGCGCTTGAGGGCGGAGCGCGAGGCGGCTGCGGCGGCTGCAGCGGGGGCGAGTGGGGGCGGGGCGCGACGACGACGTGGCTTCGTACCACCCGCACGCGACGGCTGTCTCCTCGACGCCGCAGACGAACCGCATGTTGACGCGCCCGTTGTCATGCCCGTCAAGACCACGCCCCCGGTGATAACTGGGGGGCTGTGGACGGATGATGACCTGGCGGAACTGGTGCGCCTGGTGAAGAAGTTCCCCGGTGGCAGCTCCGAGCGCTGGGAGCGCATCGCGGAGGCCATGGGCCGCACCGTGCCCGAGGTCACGCACGTGGCGGCACGCCTCAAGGACAACTGCTACAAGATCCCCGGCCAGGAAGCACAGGAGGAGGTCGTCCCCGAACCACCCAAAAAGGTAAAAACGCGTAAGACAGAAGAAACGAGTGCGGGTAATTGGTCGCAGACCCAACAAAAGGCCCTCGAGACCGCACTGGCCAAGTACCCTAAGGGTGGTGCGGGTGATCGCTGGCAGAAGATAGCGAACTCCGTGCCCGGGAAGACTAAAGAGGAATGTATGCAGCGGTGTAAATATTTATCGGAAGTACtaaggaaacagaaacagaaagagGAAGAAGAACAAAAAGAAGCGCAGGAGGAAAATACCAGTGATACACAGAAATTGCAGGACGACGAAATTAGCTCATAA
Protein Sequence
MRYVIIVLLVFIISVAAWDDDDLEVFDVVEEVNQNFYELLGVTQEASQLEIKTAFKKLTLKLHPDKNNAPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAVYYYRHVRKMGLAEGSIILFIIISFGQYAVGWAAYVEKRFTAEQILSSRGKRQKKSGFDTGLAEILEQLPKPSVKDTLPFQIPRFLWWSIIAIPRGIMEVKRKMKEREEEAKRQKKREEEERLRAEREAAAAAAAGASGGGARRRRGFVPPARDGCLLDAADEPHVDAPVVMPVKTTPPVITGGLWTDDDLAELVRLVKKFPGGSSERWERIAEAMGRTVPEVTHVAARLKDNCYKIPGQEAQEEVVPEPPKKVKTRKTEETSAGNWSQTQQKALETALAKYPKGGAGDRWQKIANSVPGKTKEECMQRCKYLSEVLRKQKQKEEEEQKEAQEENTSDTQKLQDDEISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01140870;
90% Identity
iTF_01158907;
80% Identity
-