Porl065303.1
Basic Information
- Insect
- Parnassius orleans
- Gene Symbol
- -
- Assembly
- GCA_029286625.1
- Location
- JAGSMP010002208.1:77591-78073[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.7e-10 5e-07 31.3 0.0 1 41 16 56 16 60 0.91
Sequence Information
- Coding Sequence
- ATGGTACGAAATTATGTCCGAAAAATAGATAGAGCAACTAAATATACGCGTGATGACTTGTTGGAAGctatcgggaaagtaaaaagtGGTGAATTGACGGCGTACAGAGCCTCTATTGCTTACAATATTCCTAGACCAACAATAGTAGCTCGAGTGTATGGTAGATATGGCGATAAATCTGATTCTTTAGGAAGAAGATTGGCAGAAAACTTACATCAAATGGAAATATACGGATTCGGTTTATCAAGAACAGAAATAATGGAGCTTGTTGGACACTATGTAacaaaaaacaacataaaaaatCCTTTTAAAAACGGCATCCCAGGAGAAGACTGGTTTTTGGCTTTCAAAAAACGACACAATTTGGCCGTCAAAAAACCACAAGCCGTGGAAAATTCTCGGAAAAAGGCCTGCAATCCTTGGATCATATACTCCTATTATGATTTGCTGAAAAAAACAATGGACGAATTGGAATTACGATAA
- Protein Sequence
- MVRNYVRKIDRATKYTRDDLLEAIGKVKSGELTAYRASIAYNIPRPTIVARVYGRYGDKSDSLGRRLAENLHQMEIYGFGLSRTEIMELVGHYVTKNNIKNPFKNGIPGEDWFLAFKKRHNLAVKKPQAVENSRKKACNPWIIYSYYDLLKKTMDELELR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00282211; iTF_01158763; iTF_01153910; iTF_01158885; iTF_01281242; iTF_01158711; iTF_01158713; iTF_01281241;
- 90% Identity
- iTF_01158885;
- 80% Identity
- -