Porl002915.1
Basic Information
- Insect
- Parnassius orleans
- Gene Symbol
- -
- Assembly
- GCA_029286625.1
- Location
- JAGSMP010000008.1:307691-308026[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.5e-11 4.3e-08 34.7 0.0 3 35 18 50 17 58 0.94
Sequence Information
- Coding Sequence
- ATGGCTCCACGAAAAccaatttcacaaagacaacgGCAAACTTGGTGCAAGGAGTCAATGAAAAAAGCCATCGAAGATGTGCGAAATAAGAAAATGGGCTCACTAAAAGCTTCTAAACTGTACAAAGTACCCCGAACAACTTTAAGACGTTTGGCAGCTAAAGTAGATCTATCAGCTGAAGAAGCGACTTGTACGAAACTGGGAAGAAAAGCAACATTGCCACAAGAACTAGAGAAACAGTTAGTGCAATACGTTTTGACAATGGAAGCTAAGTTGTTTGGCTTAGTCCGAAAGGATGTTATGAGTTTAGCCTATCAGCtggcaataaaaaaataa
- Protein Sequence
- MAPRKPISQRQRQTWCKESMKKAIEDVRNKKMGSLKASKLYKVPRTTLRRLAAKVDLSAEEATCTKLGRKATLPQELEKQLVQYVLTMEAKLFGLVRKDVMSLAYQLAIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01430703; iTF_00187100; iTF_00187084; iTF_00984989; iTF_00794430; iTF_00635349; iTF_00794431;
- 90% Identity
- iTF_01178395; iTF_01153855;
- 80% Identity
- -