Basic Information

Gene Symbol
Xbp1
Assembly
GCA_029286625.1
Location
JAGSMP010000051.1:2049070-2050951[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-17 4.5e-14 54.2 11.6 2 64 44 106 44 107 0.94
2 2 0.00017 0.52 12.4 1.0 33 55 89 111 88 115 0.91

Sequence Information

Coding Sequence
atgagCGCTCCCATTATCATCACTGTTCCCAACAATTACCTGACTATAGAGGAGATGGAATCGAAGGTGATGGTTGACGTCGCGTCGCCATCACCTTCAAGAAAAAGGAGGCTTGATCATCTTACATGGGAGGAAAAAATGCAAAGAAAGAAATTGAAAAATCGTGTAGCGGCTCAGACTTCCCGTGATagaaaaaaagcaaaaatgGATGAAATGGAAAACCGCATCAAACATTTCATGGAGGTGAATGAGAAGCTTATAAGTGAAGTTGAGAGTTTGAAGGCTTTAAATGAACGTCTGTTAAGTGAGAATGCAAAGCTACGCAGTGAAGCGGCGGGTCGCACCGTCGCGGGAGCCCTGGGACCAGCAGAGTCTCAACCTCGGCAGAAGGACGGGCTCCCGCCGGCGATGCGAGCGGCACGCCTACTGTTGGCGATGTGCCTCTTACAGACATCCTCGCCCACCTCGACTCTGAAGAGTATCTCGACACCCTCCAACAACTTGCAAACTCCCTCCTCCAAGAGATTGATGCAAGTGCTGCAGGAGCGGTTGAAGATGTCACAATCAGGGAAGCTAGAGAGCGCATTGAAGGAGCTCAAGTGGTGGGGACCACAACAAAGCAACTGGAATCCAGTAAAGGTGGAAGCATAG
Protein Sequence
MSAPIIITVPNNYLTIEEMESKVMVDVASPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMENRIKHFMEVNEKLISEVESLKALNERLLSENAKLRSEAAGRTVAGALGPAESQPRQKDGLPPAMRAARLLLAMCLLQTSSPTSTLKSISTPSNNLQTPSSKRLMQVLQERLKMSQSGKLESALKELKWWGPQQSNWNPVKVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_01154760;
80% Identity
-