Pmne039793.1
Basic Information
- Insect
- Parnassius mnemosyne
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963668995.1
- Location
- CAVLGL010000089.1:16960540-17008463[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.7e-14 1e-10 43.5 0.1 3 44 554 595 552 597 0.95 2 13 1.3e-09 5.1e-06 28.4 0.0 11 44 727 760 725 762 0.94 3 13 1.3e-09 5.1e-06 28.4 0.0 11 44 814 847 812 849 0.94 4 13 1.3e-09 5.1e-06 28.4 0.0 11 44 901 934 899 936 0.94 5 13 1.3e-09 5.1e-06 28.4 0.0 11 44 988 1021 986 1023 0.94 6 13 1.3e-09 5.1e-06 28.4 0.0 11 44 1075 1108 1073 1110 0.94 7 13 1.3e-09 5.1e-06 28.4 0.0 11 44 1162 1195 1160 1197 0.94 8 13 1.3e-09 5.1e-06 28.4 0.0 11 44 1249 1282 1247 1284 0.94 9 13 1.3e-09 5.1e-06 28.4 0.0 11 44 1336 1369 1334 1371 0.94 10 13 1.3e-09 5.1e-06 28.4 0.0 11 44 1423 1456 1421 1458 0.94 11 13 1.3e-09 5.1e-06 28.4 0.0 11 44 1510 1543 1508 1545 0.94 12 13 1.3e-09 5.1e-06 28.4 0.0 11 44 1597 1630 1595 1632 0.94 13 13 1.3e-09 5.1e-06 28.4 0.0 11 44 1684 1717 1682 1719 0.94
Sequence Information
- Coding Sequence
- ATGAAAGTGTTCATGGACATGAAGCCGGGCGGCTCGCTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCTTCGCGAAAGGACCTCAACGTGCAAATGATGATGGAGATAGAATCTGCTCTAATGAGCGCTGAGGTAATACGTTCACCCTGCGTCTTCATACGACCGGACGTCGATAAGGCAACAGCTAACAAGGTCAAAGATATCGTCAGCAATCACCAGGGGGAGATTTGtgATGATGAAGAAGATGCGACCCATATCATCTACCCAACAGTAGACCCCCTCGAGGAGGAGTACGCTAGGCCCGTGTTCCGGCGAGGCAATAACGTGCTGGTGCACTGGTACTATCTGCCCGACAGCCACGACACATGGTCTCAGACCGAATTGCCTGTGGAAGTGCCCGAGTCAGCGAACTGGGAGTGTAGCCGTGCGGAACCGTGGCGCGTGACGGCCACGTGGGTGCTCGACCTGCCGCAGTACAACGAGTGGATGAATGAGGAGGACTACGAGGTCGACGCCGCCGGCAAGAAGAAGGTTCATAAACTACGTCTTTCGGTTGACGATCTAATACCGGGTACAGAACCATCGAGCAAGGCGAAGAAAAGTAAAAGAAAGCGTTCACCCTCTCCTCCGCCGCAGAAACACGGAAAAAGAAAGAGTCGCTCATCAAAGCGTCGTGATAACGATGGCGAAGATGAAGAGGACAATGCTTCCAGAGACAACACTGATACTGCACCTACTCCCGAAATTGAACGACCTACGGACACACCGGCCGCGGCGCCAGTAGCGGCCGAGCCGGCGCCGGTGGCGGAGGCGCCCGCCACGCCCGCGCCCGCCATGGACGTGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGAAATGCTTACGAAAGAAGAGTTGGAGGACAATGTGACAGATCAAACGCATCACATCGTTGTTCCTTCTTACTCAGCCTGGTTCGATTATAACTCAATCCACACGATAGAGAAGCGTGCATTACCAGAATTTTTCAATGGAAAAAACAAATCGAAAACGCCTGAAATATATCTTGCATACAGGAACTTCATGATCGACACGTACCGGCTGAATCCTACGGAGTACTTAACTAGTACGGCGTGCCGTCGCAACCTAGCGGGCGACGTGTGCGCCATTATGCGTGTCCATGGCTTCCTTGAGCAGTGGGGACTCATCAACTACCAGTTAGAGGCGGAGTCTCGACCGACAGCAATGGGACCGCCGCCTACTTCGCACTTCCACGTGCTGTCCGACACACCTTCTGGACTTCAACCCCTGCAATCTAGGCCTTCACAGCCAAGACCagCAGAAAACGCGGCCGTGCCTAAAGTGGAGGCTGGGCTGCCGAACGGCACGGAGGCCGGGGCTCCAGCAGCTGCTGCCGCCGCAGCCGGCGCCGCGGCCGCCGCCCCGGCCGCGGCCCCCGGACCcgcccccgcgcccgcgcccaccgccccgcccgcgcccgccgcAGCGCCAGCTCCGGCCGCACCGCCAGCGACCGTCAAGCAGGAGCCCACCATCGACCTGGGCACAACGCCCGGACTCAAACTTGACCAGTACCGCGGCGGGACGCGCGGGCGCGAGTGGACGGAGCAGGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGACACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGACACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGACACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGACACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGACACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGACACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGACACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGACACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGACACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGACACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGCGCACCCCCACACACTAGCACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGACACTCACTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCAGGACTCCGCCTCCGGTGGCGTACTAGGTCCTCTTGCCTATCAGCCGATACCCTTCAGCAAAGTCGGCAACCCAGTGATGAGTACAGTGGCGTTTTTGGCGTCAGTTGTCGATCCACGAATAGCCTCTAAGGCTACCAGGGCTGCTATGGATGAATTTGCTGCTATCAAGGACGAGGTTCCGGCGGCCATGATGGAGGCGCACGTGAAGGCGGCGGGCGCACACGGGCCGGCCGCCGCTCTCGCTGCCACCGGCATCGCTGGCACCGCGCCAGACGTCAAGCCGCCAGgTGAAAAGAAAGAAGAACCGTCGGATGTGAAAACGGAACCAATGGAGGTTGAAGAAAGCGAGGTGAAGGTGAAAGACGAGCCATCTGACGCAACATCCGCTGATGAAGCTAAGGATAGAAAGGAGACCGCGACGCCTCCTCCTGGCGGTGCTGCAGGCGGCGTGGCAGGCGGTGGCAGCGGTGGCAGCGGTGGCGCTGTGGAGGCgggcgtggcggcggcggcggcggcggcgctgGCGGCGGCCGCGGTCAAGGCCAAGCACCTGGCCGGCGTCGAGGAGCGCAAGATCAAGTCGCTCGTGGCGCTGCTGGTCGAGACGCAGATGAAGAAGCTCGAGATCAAGCTGCGCCACTTCGAGGAGCTCGAGGCCACCATGGAGCGCGAGAGGGAGGGTCTTGAATATCAAAGGCAGCAATTGATTCAAGAACGACAGCAATTCCATTTGGAGCAGTTGAAGGCTGCCGAGTTCCGTGCGAGGCATCAAGCACATCAAAGGCTGCAAGCGGAAAGTGGCGGGGTGGCGGCAGCCGTCGGCGCGGCGGGTACAGCGGGTGCGGGaggcgcggcgggcgcggcgggcgcggggggcgcggggggcgcgggggaGGCGGCGGCCGGCGAGGTgggcgcgccgcacgcgccgcacgcgccgcccGCCGCTCCCCCGCACCACGTCTAA
- Protein Sequence
- MKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESALMSAEVIRSPCVFIRPDVDKATANKVKDIVSNHQGEICDDEEDATHIIYPTVDPLEEEYARPVFRRGNNVLVHWYYLPDSHDTWSQTELPVEVPESANWECSRAEPWRVTATWVLDLPQYNEWMNEEDYEVDAAGKKKVHKLRLSVDDLIPGTEPSSKAKKSKRKRSPSPPPQKHGKRKSRSSKRRDNDGEDEEDNASRDNTDTAPTPEIERPTDTPAAAPVAAEPAPVAEAPATPAPAMDVHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLQSRPSQPRPAENAAVPKVEAGLPNGTEAGAPAAAAAAAGAAAAAPAAAPGPAPAPAPTAPPAPAAAPAPAAPPATVKQEPTIDLGTTPGLKLDQYRGGTRGREWTEQETLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRVHPALPAPAHRGALPAGLRLRCAPPHTSTHCCCWRRWSCTATTGTASPRTWARARTTSASCTSCACPSRSPTCRTPPPHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGAHPHTLALTAAAGGAGAAPRRLEPRRRARGHAHARRHSLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDSASGGVLGPLAYQPIPFSKVGNPVMSTVAFLASVVDPRIASKATRAAMDEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPDVKPPGEKKEEPSDVKTEPMEVEESEVKVKDEPSDATSADEAKDRKETATPPPGGAAGGVAGGGSGGSGGAVEAGVAAAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGGVAAAVGAAGTAGAGGAAGAAGAGGAGGAGEAAAGEVGAPHAPHAPPAAPPHHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -