Basic Information

Insect: Parnassius mnemosyne
Gene Symbol: clz9
Assembly: GCA_963668995.1
Location: CAVLGL010000082.1:42806938-42809442[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.8e-08 9.3e-06 27.2 0.0 2 40 16 53 15 58 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.8e-08	9.3e-06	27.2	0.0	2	40	16	53	15	58	0.89

Sequence Information

Coding Sequence: ATGGTTCGTACTTATCAAAGAAAAACCGATAAGCCTTCTTGGTCTAGAGAAACTTTATGTCAGGCAATTGACGCTGTCAGATCAGGCCTATCCGGATATGAAGCAGCGAAAACTTATGATATACCTCGTAAAACAATCATGGACCACGTGACGGGTCGAAGGGGCCAAAAATCATCAACACAAGGTAGACCACCAGCCTTGTCAGCTGAAATTGAAATAGAGTTAGCTAACTGTCTACATATTATGGAAAGGCATGGCTTTGGGTTAAGTCGGAAAGAGGTAATAGAACTGGTTGGCGAGtacgttaaaaaaaataacataaatacaccATTTACCAATGGCATCCCTGGAAACGATTGGTTTTCTAATTTTATGAAACGACATAGGTTGTCAATAAAAAAACCTCAAGCAGTTGAGATAGCCCGTAAAAAAGCGGCTGACCCTTTCATTATACAAGAATTTTACGACATTGTCGAAAAAGTTATTAAAGAGCTAGGGCTTGAAAATAAGCCAGAGAGAATATATAATATTGACGAAACAAGCTACTGCAGCGACCCTCAAAAAACCAAAGTGGTCGGCTTAAAGGGATATCCTTCAACTAGAATAACATCATCAGCTGGTAAAGTAAACACAACCGTCTTGGTTGCCAGCAATGCAGCTGGAGGCAAAGGGCCTCCATTTATAATTTTCAAAGGTAAGCATGTGTGGAGTGGATGGACATCTGAGGAAGCATATCCTGGCACTTTATACAGTGCGACATCCAATGGTTGGATTGAATCCGAAGTTTTTGCAGAGTTTATGGCAAAAAGTTTCATTCCCATGGTCAAAGATGAGAAAGAGCCAACCCTCCTAATTTATGATGGTCATAGCACGCACGTGCAACTGGCTGTGGTCAAAATGGCGAAACAAAATAATATCACCATTATTAAATTGCCACCACACACAAGTCACCTTCTTCAACCACTTGATCTATGCGTATTCAAACCTTATAAAGACGCTTGGGATCAGGAAATGGTTAAATGGCAACGCACACATAAGGGCGAAAAGTTACCTAAGGATCAGTTTTCAGCGATAGTGGGAAGAGTTTGGAAAAATCTTAATtccaatgttataaaaaaagggTTCGAAAAAAGCGGAATTTATCCATTTAACAGAAAAGCTGTAACGGAATATAAACTAGACCCAGAAGCCCTAAAACGATGGAAAAAACACCATGAAACCTTATCGAAAAAACAAACACTCGCTCGTAGTTCACCATTAACCTTAACCAAATTATGCCTGAATAAAATTAACTCTTGTATTAAATTAAACTCGAATCCAGTCACCATTTTGCCAAAAATCGTTAGTTCAAAATCTTCTgagaaaatatcttttgaagattTATTAATACAATCTACCAAACAATCGCAAACTGCCAATGTCAAGAAAAAGATAGTAAAAATTTCCGCAAGtgcagaggtgataacgcatcaggACGTCATTGAAAGATTGAAACAGAAGGAAGACGATAAAGCCAAAAAAGAACAAGAAAAAGATGAAAAACGAAAGCAACGAGAGCAACGAGaccaaaaaaagaaaattataataagtaaacaaaatgagaaaattgataaagtaaaagtaaagaaaattgaCGAAAAGAGTAAAAATATAAGACTGACAAAAAACAAACAATCGCATGTTACTGACCCACCAAGCTCGGAAGTAACTCTTTCTGAAATAATATCACCTAATTCAGACTTGAACGTCCGTGACCCAATTCATTTTTTACAAGACGATTCTTCAATACTTAATTGCCATGCAAGCACCTCAAAATTACCACCGCCACtgacttcaaaaacaaaaattgctATTTTAGAAGACAGATATTTAAAAGTTGATGAAAAACTGACCAAAGATATTTTTACAGGACATAAAATGAAACGACCAGCAGACTTTACTTTACAGGGCACTGATGAAATACATACttcaaaacaaattaaatatgaaaaacaaaacaatcccatcaaaataaaaacgaaaaaaaagcaaaataaaattaagataGAAGAAGATTTAGAAGAAGACAGTGACTTTACGATTCATGATTCAGATGGTTCAGATATGGACCTAGAAAGTTACTGTAATATTTACCTAACAGAATATAAATCAGATGATGAAGAAAACGTATATACGGATTTTGGACTCACCGATATCGAGTATTATGAAAATACATCAAACAAATTAAAGAAAGGTGATTGGGTTCTAGTCAAGTTTTTGTCAAAAAAAAGTGTAAAACATTATGTAgggcaaattattaatattaatgatgaCATTCCAGTGATAAAATACGTACGAAAAACTCAAACAAAACAAAGAGGTTTGCTTTTTGTCTATCCTAATGTGGACGACATATGTGAGTTGAAACATGTTGCAGATATTGTGTCAGTTTTGCCGAAACCCACAATAACACGTCGTGGCCAAATATCCTTCAGTATTAATATCGGTAAATTTAATTTACAGTAA
Protein Sequence: MVRTYQRKTDKPSWSRETLCQAIDAVRSGLSGYEAAKTYDIPRKTIMDHVTGRRGQKSSTQGRPPALSAEIEIELANCLHIMERHGFGLSRKEVIELVGEYVKKNNINTPFTNGIPGNDWFSNFMKRHRLSIKKPQAVEIARKKAADPFIIQEFYDIVEKVIKELGLENKPERIYNIDETSYCSDPQKTKVVGLKGYPSTRITSSAGKVNTTVLVASNAAGGKGPPFIIFKGKHVWSGWTSEEAYPGTLYSATSNGWIESEVFAEFMAKSFIPMVKDEKEPTLLIYDGHSTHVQLAVVKMAKQNNITIIKLPPHTSHLLQPLDLCVFKPYKDAWDQEMVKWQRTHKGEKLPKDQFSAIVGRVWKNLNSNVIKKGFEKSGIYPFNRKAVTEYKLDPEALKRWKKHHETLSKKQTLARSSPLTLTKLCLNKINSCIKLNSNPVTILPKIVSSKSSEKISFEDLLIQSTKQSQTANVKKKIVKISASAEVITHQDVIERLKQKEDDKAKKEQEKDEKRKQREQRDQKKKIIISKQNEKIDKVKVKKIDEKSKNIRLTKNKQSHVTDPPSSEVTLSEIISPNSDLNVRDPIHFLQDDSSILNCHASTSKLPPPLTSKTKIAILEDRYLKVDEKLTKDIFTGHKMKRPADFTLQGTDEIHTSKQIKYEKQNNPIKIKTKKKQNKIKIEEDLEEDSDFTIHDSDGSDMDLESYCNIYLTEYKSDDEENVYTDFGLTDIEYYENTSNKLKKGDWVLVKFLSKKSVKHYVGQIININDDIPVIKYVRKTQTKQRGLLFVYPNVDDICELKHVADIVSVLPKPTITRRGQISFSINIGKFNLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00001115;
90% Identity: iTF_01156299;
80% Identity: -