Pmne011825.1
Basic Information
- Insect
- Parnassius mnemosyne
- Gene Symbol
- Xbp1
- Assembly
- GCA_963668995.1
- Location
- CAVLGL010000035.1:43464685-43466548[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9 3.1e+04 -3.0 0.0 18 24 32 38 29 40 0.70 2 3 2.9e-18 9.9e-15 56.2 5.9 2 52 44 94 44 96 0.97 3 3 0.00014 0.48 12.4 1.0 33 55 89 111 88 115 0.91
Sequence Information
- Coding Sequence
- atgagcGCTCCCATTATCATCACTGTTCCCAACAATTACCTGGCTATGGAGGAGATGGAGTCGAAGGTGATGGTTGACGTCGCGTCGCCATCACCTTCAAGAAAAAGGAGGCTTGATCATCTTACATGGGAGGAGAAAATGCAAAGAAAGAAATTGAAAAATCGTGTAGCGGCTCAGACTTCCCGTGATAGAAAAAAAGCAAAAATGGATGAAATGGAAAACCGCATCAAACATTTCATGGAGGTGAATGAGAAGCTTATAAGTGAAGTTGAGAGTTTGAAGGCTTTGAATGAACGTCTGTTAAGTGAGAATGCAAAGCTACGTAGTGAAGCGGCGGCTCGCACCGTCGCGGGAGCCCCGGGACCAGCAGAGTCTCAACCTCGGCAGAAGGACGGGCTCCCGCCGGCGATGCGAGCGGCACGCCTACTGTTGGCGATGTGCCTCTTACAGACATCCTCGCCCACCTCGACTCTGAAGAGTATCTCGACACCCTCCAACAACTTGCAAACTCCCTCCTCCAAGAAATTGATGCAAGTGCTGCAGGAGCGGTTGAAGATGTCACAATCAGGGAAGCTAGAGAGTGCATTGAAGGAGCTCAAGTGGTGGGGACCACAACAAAGCAATTGGAATCCAGTAAAGGTGGaagcatag
- Protein Sequence
- MSAPIIITVPNNYLAMEEMESKVMVDVASPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMENRIKHFMEVNEKLISEVESLKALNERLLSENAKLRSEAAARTVAGAPGPAESQPRQKDGLPPAMRAARLLLAMCLLQTSSPTSTLKSISTPSNNLQTPSSKKLMQVLQERLKMSQSGKLESALKELKWWGPQQSNWNPVKVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491609;
- 90% Identity
- iTF_01154760;
- 80% Identity
- iTF_01154760;