Basic Information

Insect: Parnassius glacialis
Gene Symbol: Znf296
Assembly: GCA_033319125.1
Location: JAVANC010000004.1:4122206-4153384[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 9e-05 0.021 17.1 0.1 3 20 80 97 78 101 0.95

2 9 0.0028 0.65 12.4 0.7 2 23 141 162 140 162 0.94

3 9 0.028 6.3 9.3 0.2 2 21 268 287 267 288 0.92

4 9 9e-05 0.021 17.1 1.9 1 23 296 319 296 319 0.95

5 9 8e-05 0.018 17.3 5.4 1 23 337 359 337 359 0.98

6 9 1.1e-06 0.00025 23.1 2.4 1 23 366 388 366 388 0.99

7 9 9.1e-08 2.1e-05 26.5 2.4 3 23 407 427 405 427 0.96

8 9 5e-05 0.011 17.9 3.6 1 23 433 455 433 455 0.99

9 9 9.8 2.2e+03 1.3 0.6 1 8 461 468 461 469 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	9e-05	0.021	17.1	0.1	3	20	80	97	78	101	0.95
2	9	0.0028	0.65	12.4	0.7	2	23	141	162	140	162	0.94
3	9	0.028	6.3	9.3	0.2	2	21	268	287	267	288	0.92
4	9	9e-05	0.021	17.1	1.9	1	23	296	319	296	319	0.95
5	9	8e-05	0.018	17.3	5.4	1	23	337	359	337	359	0.98
6	9	1.1e-06	0.00025	23.1	2.4	1	23	366	388	366	388	0.99
7	9	9.1e-08	2.1e-05	26.5	2.4	3	23	407	427	405	427	0.96
8	9	5e-05	0.011	17.9	3.6	1	23	433	455	433	455	0.99
9	9	9.8	2.2e+03	1.3	0.6	1	8	461	468	461	469	0.91

Sequence Information

Coding Sequence: ATGGAACATTATGGATTGGATGATCGTGAAGATAGCGTAGGTTTGCAGTACAACACGGAATTGCCTGCTGATGACGATAGCTTCTCAGACACAGacATTGTTAAAAATGAAGGGAGTGGAAATGAAACAGAGCCTGATAAGATTTGCAATATGGATACTGTGGCACCTGATAATACACAAGAAAAGTCACAAAAGAAATGTATAAaagTGGAAGTCGAGGATAGCAGTAGCACGTTTTGTCCGTTATGTGGCATTAGCTTTATTGATTCTGACGGACTCACCAAACACATGTGGGAGAGGCATGCCGAGGTTATGGGTCCAAAGAAGAGGGGCAGACCTAAGAAGATGGTCACAGGTACAATCCTAAATAAACTATCAGAAAATGGATATTATTTGAAAACGGTTCCAGTGAAGAGATTGAACTGTGCATTCTGCAAAGGGAAATTTAAAACCAAAGACGAATTAGTCACGCATATGACAGAGCATAAGGACTTGAAAGTGTTTTGCTGTATTATCTGTAAGAAGATGTATTTAAAGAAGAAATACTTTGATTCGCACTCGTGTGCAGATGACAAAACTGAAGGGAACAATTTGCAAGAGAATAATCCACCCGTGGTAATACCGCAGAAAGATGAACAAGGGGACTTTATGATGGAGACATATTTACATGAGCTATTGGACCTTAGTAAGAATCCGGATGGTGCAGATTCGTGGCAGACGTGTGCCGTGTGTAGTGCTTTGCTGCCTGCACCGACCGCTCTGGCAGCCCACGTGGATGCTCTGCATCCAGAAATGTCGGTGCGTTGTGCTCTTTGCAACAAGGTGTTCGCGTCCGTGAAGTCCGCGACGCGTCACCGCAGCAAGTGCGCTAGCGTGGAGCGCGCGTTCCCGTGCGTCACCTGCGGCAAGCGATTCGCACACGAGATATCCCTCAACAAGCACATCCTGCACAGTCACGCAGGACAGAGCGTCTCCGTGCGGTTCAACGAAGTCGCGGACGGTGAACGGTACCAGTGCGACACGTGCAGCCGATGCTTTTACAGCAAAGACCTGCTAATGAAGCACACGAAGAACCACAAACCGGGCGACAAATACTACGAATGTGAAATATGCAAGAAACGATTCCATAGGGGCGACAATCTGCGGTCGCACATGCGGGTACACGAGCCAAAGTCTGAGATTGGGGAGGGGAAGGAGGGGGGTGCCGGAGGCTGCCTGTGCCTGTACTGCGGCCGCAGTTTCACCAACTCCTCGAATCTCATTGTTCACATGCGCCGACACACCGGCGAGAAGCCCTACAAGTGTGACTTCTGTGATAAAGGATTCCCCAGATCTTCAGACCTGCAATGCCACAGGCGGTCACACACCGGAGAGAGGCCTTACATATGCGGCGTCTGTGGGAAAGGTAATTTCCTTCCCTTATACTTAAAACTAATACTAGAAAATTTCTCGAATCTTCCGGTGGATGGCGGTATATCCGATAAAGGTAATTTTTATCTAAAGCGTAGGTCACACACAGTGAATATTCGCAGCGAGTGTATTCACAGGCGTGTAATCAGGAGCGGAATGGCTACTCGCAGCGAGTACcctgtcacacacagcgaatCCTCGCAGCAAATTCAACTCGCGGCGAATGAATCTAATTGCAGGGAATAG
Protein Sequence: MEHYGLDDREDSVGLQYNTELPADDDSFSDTDIVKNEGSGNETEPDKICNMDTVAPDNTQEKSQKKCIKVEVEDSSSTFCPLCGISFIDSDGLTKHMWERHAEVMGPKKRGRPKKMVTGTILNKLSENGYYLKTVPVKRLNCAFCKGKFKTKDELVTHMTEHKDLKVFCCIICKKMYLKKKYFDSHSCADDKTEGNNLQENNPPVVIPQKDEQGDFMMETYLHELLDLSKNPDGADSWQTCAVCSALLPAPTALAAHVDALHPEMSVRCALCNKVFASVKSATRHRSKCASVERAFPCVTCGKRFAHEISLNKHILHSHAGQSVSVRFNEVADGERYQCDTCSRCFYSKDLLMKHTKNHKPGDKYYECEICKKRFHRGDNLRSHMRVHEPKSEIGEGKEGGAGGCLCLYCGRSFTNSSNLIVHMRRHTGEKPYKCDFCDKGFPRSSDLQCHRRSHTGERPYICGVCGKGNFLPLYLKLILENFSNLPVDGGISDKGNFYLKRRSHTVNIRSECIHRRVIRSGMATRSEYPVTHSESSQQIQLAANESNCRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01154416;
90% Identity: -
80% Identity: -