Basic Information

Insect: Parnassius glacialis
Gene Symbol: -
Assembly: GCA_033319125.1
Location: JAVANC010000004.1:64688575-64694647[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 42 0.001 0.24 13.8 1.5 1 23 25 47 25 47 0.98

2 42 0.072 16 8.0 0.0 2 23 83 105 82 105 0.90

3 42 0.77 1.8e+02 4.7 2.2 1 23 245 268 245 268 0.89

4 42 0.58 1.3e+02 5.1 0.1 2 23 296 318 295 319 0.94

5 42 0.072 17 8.0 0.5 2 23 341 363 340 363 0.95

6 42 0.28 65 6.1 0.5 3 23 370 391 368 391 0.93

7 42 0.0032 0.73 12.2 0.5 1 23 396 419 396 419 0.95

8 42 2.7 6.2e+02 3.0 1.7 1 23 424 447 424 447 0.89

9 42 0.015 3.3 10.2 5.3 1 23 451 474 451 474 0.97

10 42 0.0059 1.3 11.4 1.7 2 23 481 502 480 502 0.95

11 42 0.00023 0.052 15.8 2.3 1 23 508 530 508 530 0.98

12 42 0.024 5.4 9.5 0.2 1 23 577 599 577 599 0.97

13 42 5.5 1.2e+03 2.1 0.1 3 23 628 649 626 649 0.94

14 42 0.34 77 5.9 2.1 2 23 670 692 669 692 0.94

15 42 0.00068 0.15 14.4 3.7 3 23 699 719 697 720 0.95

16 42 0.00014 0.032 16.5 0.5 1 23 724 747 724 747 0.96

17 42 0.011 2.6 10.5 1.4 2 23 750 772 749 772 0.96

18 42 7.7 1.8e+03 1.6 0.2 2 20 778 796 777 798 0.91

19 42 0.00095 0.22 13.9 3.4 1 23 849 872 849 872 0.94

20 42 3.9 8.8e+02 2.5 0.5 2 23 900 922 899 922 0.94

21 42 0.00083 0.19 14.1 0.1 1 23 944 967 944 967 0.95

22 42 5.8e-05 0.013 17.7 3.9 2 23 973 995 973 995 0.95

23 42 0.0039 0.88 12.0 3.4 1 23 1000 1023 1000 1023 0.95

24 42 0.0045 1 11.8 1.1 2 23 1029 1051 1028 1051 0.94

25 42 0.00018 0.042 16.1 3.3 1 23 1055 1078 1055 1078 0.97

26 42 0.044 10 8.7 0.6 2 23 1085 1106 1084 1106 0.96

27 42 0.16 36 6.9 2.0 1 22 1112 1133 1112 1133 0.92

28 42 0.0011 0.26 13.6 3.6 3 23 1178 1198 1176 1198 0.96

29 42 0.025 5.7 9.4 0.0 2 23 1226 1248 1225 1248 0.91

30 42 0.019 4.3 9.8 1.0 1 23 1268 1291 1268 1291 0.96

31 42 1.8e-05 0.0042 19.3 1.0 1 23 1296 1319 1296 1319 0.97

32 42 8.4e-05 0.019 17.2 1.3 1 23 1324 1347 1324 1347 0.95

33 42 0.017 3.8 10.0 2.5 2 21 1350 1369 1350 1372 0.94

34 42 0.22 50 6.5 5.3 2 21 1379 1398 1379 1399 0.95

35 42 0.0028 0.63 12.4 1.1 1 23 1454 1477 1454 1477 0.96

36 42 1.2 2.7e+02 4.1 0.1 2 23 1550 1573 1549 1573 0.94

37 42 9.6e-05 0.022 17.0 0.3 3 23 1580 1601 1579 1601 0.94

38 42 0.0041 0.94 11.9 4.6 2 23 1606 1628 1605 1628 0.93

39 42 0.0033 0.76 12.2 4.7 1 23 1633 1656 1633 1656 0.97

40 42 8.5e-06 0.0019 20.3 5.2 1 23 1660 1683 1660 1683 0.97

41 42 0.00071 0.16 14.3 0.3 3 23 1691 1711 1689 1711 0.96

42 42 0.00014 0.032 16.5 0.6 1 23 1717 1739 1717 1739 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	42	0.001	0.24	13.8	1.5	1	23	25	47	25	47	0.98
2	42	0.072	16	8.0	0.0	2	23	83	105	82	105	0.90
3	42	0.77	1.8e+02	4.7	2.2	1	23	245	268	245	268	0.89
4	42	0.58	1.3e+02	5.1	0.1	2	23	296	318	295	319	0.94
5	42	0.072	17	8.0	0.5	2	23	341	363	340	363	0.95
6	42	0.28	65	6.1	0.5	3	23	370	391	368	391	0.93
7	42	0.0032	0.73	12.2	0.5	1	23	396	419	396	419	0.95
8	42	2.7	6.2e+02	3.0	1.7	1	23	424	447	424	447	0.89
9	42	0.015	3.3	10.2	5.3	1	23	451	474	451	474	0.97
10	42	0.0059	1.3	11.4	1.7	2	23	481	502	480	502	0.95
11	42	0.00023	0.052	15.8	2.3	1	23	508	530	508	530	0.98
12	42	0.024	5.4	9.5	0.2	1	23	577	599	577	599	0.97
13	42	5.5	1.2e+03	2.1	0.1	3	23	628	649	626	649	0.94
14	42	0.34	77	5.9	2.1	2	23	670	692	669	692	0.94
15	42	0.00068	0.15	14.4	3.7	3	23	699	719	697	720	0.95
16	42	0.00014	0.032	16.5	0.5	1	23	724	747	724	747	0.96
17	42	0.011	2.6	10.5	1.4	2	23	750	772	749	772	0.96
18	42	7.7	1.8e+03	1.6	0.2	2	20	778	796	777	798	0.91
19	42	0.00095	0.22	13.9	3.4	1	23	849	872	849	872	0.94
20	42	3.9	8.8e+02	2.5	0.5	2	23	900	922	899	922	0.94
21	42	0.00083	0.19	14.1	0.1	1	23	944	967	944	967	0.95
22	42	5.8e-05	0.013	17.7	3.9	2	23	973	995	973	995	0.95
23	42	0.0039	0.88	12.0	3.4	1	23	1000	1023	1000	1023	0.95
24	42	0.0045	1	11.8	1.1	2	23	1029	1051	1028	1051	0.94
25	42	0.00018	0.042	16.1	3.3	1	23	1055	1078	1055	1078	0.97
26	42	0.044	10	8.7	0.6	2	23	1085	1106	1084	1106	0.96
27	42	0.16	36	6.9	2.0	1	22	1112	1133	1112	1133	0.92
28	42	0.0011	0.26	13.6	3.6	3	23	1178	1198	1176	1198	0.96
29	42	0.025	5.7	9.4	0.0	2	23	1226	1248	1225	1248	0.91
30	42	0.019	4.3	9.8	1.0	1	23	1268	1291	1268	1291	0.96
31	42	1.8e-05	0.0042	19.3	1.0	1	23	1296	1319	1296	1319	0.97
32	42	8.4e-05	0.019	17.2	1.3	1	23	1324	1347	1324	1347	0.95
33	42	0.017	3.8	10.0	2.5	2	21	1350	1369	1350	1372	0.94
34	42	0.22	50	6.5	5.3	2	21	1379	1398	1379	1399	0.95
35	42	0.0028	0.63	12.4	1.1	1	23	1454	1477	1454	1477	0.96
36	42	1.2	2.7e+02	4.1	0.1	2	23	1550	1573	1549	1573	0.94
37	42	9.6e-05	0.022	17.0	0.3	3	23	1580	1601	1579	1601	0.94
38	42	0.0041	0.94	11.9	4.6	2	23	1606	1628	1605	1628	0.93
39	42	0.0033	0.76	12.2	4.7	1	23	1633	1656	1633	1656	0.97
40	42	8.5e-06	0.0019	20.3	5.2	1	23	1660	1683	1660	1683	0.97
41	42	0.00071	0.16	14.3	0.3	3	23	1691	1711	1689	1711	0.96
42	42	0.00014	0.032	16.5	0.6	1	23	1717	1739	1717	1739	0.97

Sequence Information

Coding Sequence: ATGCGTAGGAGAAGAATTTTGGCAATTCTGTTTAATAATACAACGATTATACCGTTTAAATGGTGTGGGAACTACATCTGCTTCTACTGCGGTTTAAAATTTGTTCAATATAAAGAACTTTACGAACACACAAAGTCACACAGGCCTTATGATGTACAGGATGTTTCTTTAAAATGTGATCCCACAAAATCATTTAAAGAACACTTGCAATATTTCGGAGAACCGAAATTCGATTTATCTAATCTAATATGTGAACTGTGCGAGAGGTCATTCGATGATTTATCCGCTGTAATTGATCATTTAATCGATGAACACAAATTCGATATAGATAAGGAGGTAGATATTTCTGCAGGGGGATACAATTTAAAAGATCTAGAATGCGCATTATGTGACAAAAAGTTGGATTGTATAGAAGATTTGATTTCGCATGTTTATATCAAGCATTCGCAAAGATCTTCGCCCGTTAAAGATTTTCGACAAAGTGAAACTTGGAAAACGCCAGCTAAACAGACGCGTCttaatacaaaatattctaaAGAGCTTCCGTCGAAATTTCCAAAAAGCCGTCAGTTAAAGGAGGGAAATAATAGAAGACGGTATACCGGTAAACATGATAAATCTTCTAAATCTCTTGGTATTTCTCGTCGTCAGATGATAAAAATGAACCGGAAAAATCTCGCGTGCATTATAAAAATGTCTACTGCAATGCCATTTAAATACTATCAGAATCGATTTACCTGTTTCTACTGTTCAAAAACCTTCTTAGAGCACGAAGAGATGAGGGAGCATACCATTTCCGTTCACTCCTTTGCGGAAATTGAGGGTAGCCTATCAGAAATTCTCAAGAAGTTCACTTCACGCGCTACCGTAGACATCTCTTCATTGTCTTGTAGAGTATGTAATGAAAATTTAGAAGACTTAGATAAATTGATTGATCATTTAATTGTGGCACATCACGTTAAATGCGACAGAAGTGTAACTGGTGCAATACAAGCTTTTAAATTAGTCAAATACGAAATGAAATGTCCATCTTGTCCGAATAAATATTCGTATTTTAACACgttattaaaacatataaatgaaGAACATAAAGCGAAATCGCATTTGTGTTCGACTTGTGGCGTTCGGTTCGGAAGCGAAGCTGTCCTTACGTCACACGTAACTCGGACTCATAGTAAAACTGCTTTTCAGTGTACAGAGTGCAATGCCAGTTTCAAAGTATTAATTAAACTGAAGAGTCACAAGGCTAGGGCGCATGGATCGAAAGAATTCCCGTGCTCGATGTGTGACGAGAAGTTCTTGACCGATTACGGGAAGCACAAACATTTGCTGACGATGCATGGCGTCGGTCATAGATGTACACACTGCGATAGAATGTTCATAAAGGATTCCTTCATGAGAAACCACGTTCGTAGAATTCATCTGGTAGAACGTGAGATCGAGTGTACGGTCTGCAAAAAAAAGTTCTTCGACAAGGAACAACTTAAATTCCATATGGTGAAACATATCGGTTCCAGAGATTTCCACTGCGACGTCTGTGGCAAAAGTTTCTTCTGGAAGAAGAACCTTCGTGTACATATAAACTCGCATAATAAACATACACCGAAAAATTTATTTACAGATAAAAAGGGTCGAGCTAAGACGCCCAGTTGCAATAAACTAAGGCGGAGAAACCTTCAGATTCTATTTAATAACACAACGTTAATCCCTTTCAAATGGCGCGGAAAGTACATGTGTTTTTATTGCGGGGAGGATTTGCCAGAGTACGAGGAACTAAGAAAGCATACGAAAGCGCACGGCTCGTGTTCTGAAACTGATCGAGCGATTAAACTCGTTAAAGCTGGCGATGCTGAAGTTAAAATCGATGTATCGAACATAGCTTGTGAATTATGCGAAGACACGTTtaacaattttgatgaaatagTTGATCATTTGTATACTAAACATGGACTGTCATATGATAGAAAGGTGCGTTTAGAAATAACGAAATACCGGCTCGCAGATCTCAAATGTTTACTTTGTGATCAACAATTTAGCTACTTCAATAAATTAGTGATTCACGTAAATAATTGTCATCCGAATCAATGCTTGTTATGTCATGAATGTGATCAGAAGTTCAATAAAAGACGGGACTTAGATGCACATATTAGATCTCATCATAAAAAAGGTTACACTTGCTTAAAGTGTCCCATAACGTTCAAATCTAATGCCGAGCTACAGACTCATAAAATGAACGCTCACGCGTCCTCGTGTAATATTTGTTTCAGACAGTTCTCTTCAGCAAACAAAAGGTTAAAACATATGAAGGTAGATCATGTCTCTGATGCTTTACAGTGTGGATTCTGCCTTAAAGTTATGACTACAAAGCAGGGTTTCCTGCGACACGCAACAACTTGTACACGCATTGTTGATGGCGTTAGAATATCCGATGCCATTTTAGTAGATGACAAAGAAAAGAAACCTTCAGTTAAGCAAATACGAAATGATTTAGCTTGCATTCTAAATATGTCTACAGCTATCCCTTTTAAACATTACATGAGTAGATTTAGATGTTTCTATTGTTCCAAAGATTTCACGGATTGCGATGATCTAAAGCAACACACTGTTATGGAGCATCCTCTCTGTGATATCGGATTAAAGGCTATGAAACTACGAAATAGGGAAGAGGGTCGTATTAAAATTGATACGTCCAAATTGTCCTGCAAAGTCTGCTATGAATCTTTGCTCGATTTAAATCATTTAATAGACCATCTAACAACAGAACACAAAGCTAATATAGATAAAACTGTTGATATCCAATTGCAGCCGTACAAACTTACGAAGGATAACTTTGCTTGTCCTATTTGCGGGGAGGTCTATAGATATTTTGCGATGCTATTGAAACATGTTAGTGTTACGCATACGGACAACAAAAATGTCTGCTCTTATTGCGGTAAATGCTTTAGGTCCCATCCAAATCTTCGTGCTCACGTATCGCGGCGACACAGAGCTGCGGCGTTTAGATGTGAGCATTGCAACTCGGAATTTATCTCTAATAATCACCTGCGAACGCATTTGGGCAAAGCACACGGCACCAAAGTGGTGCAATGTTTGGAGTGCAAAGAGCGATTCACGTCGCGCTATTTCATGCAGAGGCATTTGATAAATTCGCATCAATCTGGTCATAAATGTTCTTACTGCGGCAAATTATTCATTAGGAATTCATTTATGGTTAATCATATAAGGCGGACGCATTTTAAAGAGAAGAATGTCGAATGTTCCTTGTGTCGCGAAAGGTTTTTTGATGCGCAACGCTTAAAAATGCACATGGTGAAACATTATGGGGAAAGAAATTTCCATTGCGATGTTTGTGGAAAGAAATTTCTTTGGAAGAAAAATCTGAGAGAACATTATAGAAAGGATAATTTCTTTTCAGATGAAATTCCGCAAGGGCCGTACGAGAACTGTACCTCTGAGAGAAGGAGGAAAAACTTGCAAATTCTTTTCAACAATACAACTATTTTGCCGTTCAAGTGGCGAGGAAGGTGCCTCTGTTTCTATTGCGGAAAGAGTTACACGGAGTATACGGATTTGCGGAAACACACCCAATCACACGGCCCTTGCACCACGAAAGACTATTCATTGAAACTAATAAAAGGAAATCACATTGAAATTAAAATCGATGTATCTGATATCACGTGTGAAATTTGCAATGAACCTTTCACTACATTCGACGAAATAATCGATCATTTAATTGGAAAACACAACATGGACTACGATAAAAGTATAGAGACGCCTCTTCAAGAATACAGACTTGCGGATTTCCGTTGTCTATTTTGTGACCAACAGTTTACTTACTTCGGATATTTGGTGAATCATGTCAACAACGTTCATCCGCAAAATAATTATGTTTGTAATGATTGCGGTGTGAGTTTCAATAAGAAAAGAGATTTAGCGTTGCATATACGACATAACCATCGCCAAGGAGGATACTCTTGTCCAGAATGCCCACAGAGTTTCGAATCTCATGGCCTTCTTCGTAAACATCGAAACGATTTCCATTTCAGGAAATGTAAACGTTGTGGTATGAACTTTGCTTCCTATAGTCTACTATTGAAACATTTACAATGTGATCATCCAGATGACGCCAGCGCCAAATGTCCGCATTGTTCCAAACAATGCCACTCGTCTCAAGGTTTAAAACAACACATAAATAAGTGTAAAGTTAATATGCTTGTACAAATAGATCAGCCTGTAGATAACCTTACCCTCGACAATATGCTGCAACCGAAAAAGAAACAAAACGTCTTACAAATACGACAGAATATTCAGTGCGTTCTGAACATGTCTACAGCGTTACCGTTTAAGTTTTTCGCGAAATATTACTGTTTTTATTGCTCGAAGAAATTCGTTGAATTTGACGAACTAAGGGAACACACTTTAGTAGAACATCCTGTATgcgatttaaaatcaaaaagcTTGAAGAAATGTAAAGGAGACAGAATAACCGTAAAAGTAGATATAACAAAACTAAGTTGTAAAATTTGCGGCCAGCCTATGGACAATTTAGACATTCTAATAGATCACTTAGTCTCACAACATGACGCCAACTACGACAAATCTGTAACGGGTTGTCTAGAGCCTTACAGGGTGATAAAAGACAACATGCCGTGCCCGATCTGTCCAAATCGCGTGTTCAGATACTTTGGAATTCTACTTAGGCATATAAACTCGGAGCACAGTAACAACAACAGGATCTGCGATTTTTGCGGCCGCAGTTTTAAGAATGTGACAAATCTAAAGGTGCATATTACTTACGCACACACCGGCGCCTGCGAATGCGACATTTGCGGCACGAAGTACAAGAATCAGTGGTGTTTGAACCGGCACAAAGCCAAAAGCCACAACGCGAAAGATTACAAATGCCCGAAATGCCCAGAGTGTTTCCAGTCAGAGTACCACAAGCAAAAACATTTGATCAAAGTCCACGACATCGGTCACAAGTGTACGTACTGCGGGAAAATGTTCACTAGAAACTCGTTTATGAAGGACCATATACGTAGGACGCATCTGAAGGAGAAGAATGTGATCTGTTCGGTCTGCAATGAGAGATTCTTTGACAACTACCTGCTGAGAATGCATATGGTGAAGCACGAGGGCGAGCGGAAGTTCAGCTGTGAAGTTTGCGGCAAAGCGTTTCTTAGGAGGAGCAACCTCAGTTCGCACAAGGAAATGCATAAGAAGTATGGACATTTACAGCCGTAA
Protein Sequence: MRRRRILAILFNNTTIIPFKWCGNYICFYCGLKFVQYKELYEHTKSHRPYDVQDVSLKCDPTKSFKEHLQYFGEPKFDLSNLICELCERSFDDLSAVIDHLIDEHKFDIDKEVDISAGGYNLKDLECALCDKKLDCIEDLISHVYIKHSQRSSPVKDFRQSETWKTPAKQTRLNTKYSKELPSKFPKSRQLKEGNNRRRYTGKHDKSSKSLGISRRQMIKMNRKNLACIIKMSTAMPFKYYQNRFTCFYCSKTFLEHEEMREHTISVHSFAEIEGSLSEILKKFTSRATVDISSLSCRVCNENLEDLDKLIDHLIVAHHVKCDRSVTGAIQAFKLVKYEMKCPSCPNKYSYFNTLLKHINEEHKAKSHLCSTCGVRFGSEAVLTSHVTRTHSKTAFQCTECNASFKVLIKLKSHKARAHGSKEFPCSMCDEKFLTDYGKHKHLLTMHGVGHRCTHCDRMFIKDSFMRNHVRRIHLVEREIECTVCKKKFFDKEQLKFHMVKHIGSRDFHCDVCGKSFFWKKNLRVHINSHNKHTPKNLFTDKKGRAKTPSCNKLRRRNLQILFNNTTLIPFKWRGKYMCFYCGEDLPEYEELRKHTKAHGSCSETDRAIKLVKAGDAEVKIDVSNIACELCEDTFNNFDEIVDHLYTKHGLSYDRKVRLEITKYRLADLKCLLCDQQFSYFNKLVIHVNNCHPNQCLLCHECDQKFNKRRDLDAHIRSHHKKGYTCLKCPITFKSNAELQTHKMNAHASSCNICFRQFSSANKRLKHMKVDHVSDALQCGFCLKVMTTKQGFLRHATTCTRIVDGVRISDAILVDDKEKKPSVKQIRNDLACILNMSTAIPFKHYMSRFRCFYCSKDFTDCDDLKQHTVMEHPLCDIGLKAMKLRNREEGRIKIDTSKLSCKVCYESLLDLNHLIDHLTTEHKANIDKTVDIQLQPYKLTKDNFACPICGEVYRYFAMLLKHVSVTHTDNKNVCSYCGKCFRSHPNLRAHVSRRHRAAAFRCEHCNSEFISNNHLRTHLGKAHGTKVVQCLECKERFTSRYFMQRHLINSHQSGHKCSYCGKLFIRNSFMVNHIRRTHFKEKNVECSLCRERFFDAQRLKMHMVKHYGERNFHCDVCGKKFLWKKNLREHYRKDNFFSDEIPQGPYENCTSERRRKNLQILFNNTTILPFKWRGRCLCFYCGKSYTEYTDLRKHTQSHGPCTTKDYSLKLIKGNHIEIKIDVSDITCEICNEPFTTFDEIIDHLIGKHNMDYDKSIETPLQEYRLADFRCLFCDQQFTYFGYLVNHVNNVHPQNNYVCNDCGVSFNKKRDLALHIRHNHRQGGYSCPECPQSFESHGLLRKHRNDFHFRKCKRCGMNFASYSLLLKHLQCDHPDDASAKCPHCSKQCHSSQGLKQHINKCKVNMLVQIDQPVDNLTLDNMLQPKKKQNVLQIRQNIQCVLNMSTALPFKFFAKYYCFYCSKKFVEFDELREHTLVEHPVCDLKSKSLKKCKGDRITVKVDITKLSCKICGQPMDNLDILIDHLVSQHDANYDKSVTGCLEPYRVIKDNMPCPICPNRVFRYFGILLRHINSEHSNNNRICDFCGRSFKNVTNLKVHITYAHTGACECDICGTKYKNQWCLNRHKAKSHNAKDYKCPKCPECFQSEYHKQKHLIKVHDIGHKCTYCGKMFTRNSFMKDHIRRTHLKEKNVICSVCNERFFDNYLLRMHMVKHEGERKFSCEVCGKAFLRRSNLSSHKEMHKKYGHLQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -