Pgla055757.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- -
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000026.1:40311387-40312421[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-07 0.00015 23.3 0.0 5 34 22 51 18 61 0.83
Sequence Information
- Coding Sequence
- atgccaagaaattataaaaaacgtATAGGGTcgagaaattataaaaattacagcGCCGAAACTTTAAGACAATGTTTGGCTTCCATAGAAAATAAAGGAATAACGCAAAGAAAAGCTAGTGAAAAGTATGGCATCCCACGCAGAACCATTATTAATCAGTTAAGACTCCTACGATCTAAAATGCCATCTCGACCTCCAGGCGCACCAACAACATTTTCAAGTGAAGAAGAAGCCTTATTTGTCGACTGCATTTTAAGGCTGAGCGAGTACGGCTTTCCTCTCACAATTTTCGATCTTCGCATTGTTATTAGAACATATTTGGAGAAAATTGGTCGGAgagttacaaaatttaaaaataattgtccaGGTACTGAATGGGTGTCAAGTTTCCTAAAAAGACATTCATGTTTATCACAAAGATTTGCGACCAACATTAAACGCAACAGAGCAGCCATTGACAAGGAAACCATCACTGCCTACATAGAAAACTTGAAAGAGGTGGTTAGAGACATACCGCCCGAAAATTTATGGAATTTTGATGAGACTAATTTATCCGACGACCCTGGTCAAAAAAAAGTAATAGCGAAGCGAGGTGCAAAATACCCTGAACTTATAAGTAATACCTCCAAAAGCTCAACTTCTATCATGTTTTGTGGTAGTGCTAAGGGAGAATTATTACCGCCGTATATTGTCTATAAATCTAAGCAACTATGGAATACATGGACGGAACAAGGGCCAAAAGATGCCAGATTTAACAATAGCCCATCAGGTTGGTTTGACATGAATATATTTAACGATTGGTTTTTTACACAAATTTTGCCAATATTAAAGAAACAAGAGGGTCCGAAAGTTATAATAGGAGATAACTTGTCATCTCACATTTCTGTAGACGTCCTAAATGCTTGtgacaaaaataatattagattTGTTTGTTTGCCACCTAATAGCACTCATCTActgtgcgttcaccgtaagatgtcccctgctgtgatgttggcactattgcttgtcaatctgttgtcagtttgtgattag
- Protein Sequence
- MPRNYKKRIGSRNYKNYSAETLRQCLASIENKGITQRKASEKYGIPRRTIINQLRLLRSKMPSRPPGAPTTFSSEEEALFVDCILRLSEYGFPLTIFDLRIVIRTYLEKIGRRVTKFKNNCPGTEWVSSFLKRHSCLSQRFATNIKRNRAAIDKETITAYIENLKEVVRDIPPENLWNFDETNLSDDPGQKKVIAKRGAKYPELISNTSKSSTSIMFCGSAKGELLPPYIVYKSKQLWNTWTEQGPKDARFNNSPSGWFDMNIFNDWFFTQILPILKKQEGPKVIIGDNLSSHISVDVLNACDKNNIRFVCLPPNSTHLLCVHRKMSPAVMLALLLVNLLSVCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091793; iTF_00986002;
- 90% Identity
- iTF_01091793;
- 80% Identity
- -