Pgla045079.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- -
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000020.1:47352768-47353133[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-07 3.6e-05 25.2 0.0 5 40 14 49 10 53 0.85
Sequence Information
- Coding Sequence
- ATGAAGGGCGAGAAACGCAGAAATTATGACTCTTCACGCTTCAAGGAGGCTTATATGAAAGTTATAAAGGATAATTGGTCAGTGTACAAGGCGTCGAAGGAATATGGCATACCGTGGTCTACTTTGAGAAGACACATAGCTACTCATGGAGGTGAAAGTTTCGACTTACCTAAACTTGGGAGACCATTCACATTAGACAGCGACCTTGAATGTAAGTTTGTTTCCTAcataattaaaatgcaagaactAGGATTTGGTCTCAGCGTCACAGACATCAAAGCTAAATGTTACGCTTTAGCAGTCCAAGCAGGAAAAGATCACCAGTTTAACGATGCTAAACGTAAAGCTGGGCCTTATTGGTGGTGA
- Protein Sequence
- MKGEKRRNYDSSRFKEAYMKVIKDNWSVYKASKEYGIPWSTLRRHIATHGGESFDLPKLGRPFTLDSDLECKFVSYIIKMQELGFGLSVTDIKAKCYALAVQAGKDHQFNDAKRKAGPYWW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01155093; iTF_01153912; iTF_01153885; iTF_01157680;
- 90% Identity
- iTF_01157680; iTF_01155093; iTF_01153912; iTF_01153885; iTF_01153895;
- 80% Identity
- iTF_01157680;