Pgla014741.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- -
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000006.1:39507696-39510722[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-07 3.7e-05 25.2 0.0 5 37 25 58 24 64 0.88
Sequence Information
- Coding Sequence
- ATGGTAAAACCTAAAAAGCAAAGCCGAAGACGCCTCGGTGCCAggtattacaaaaattataatgatTACATGTTAGATCTCGCAGTTGGgtacgttaaaaataaaaaaatgtcatcgaGAGAGGCTGAAAAATATTTTGGTATACCGAGACGGACCCTTCTGAACAAAGTTCAAGAGCTGCACCAAAAAAAAATAGGAGCTCCAACGCGACTTACTGAGGAAGAAGAGAAGAATATAGTAAAAGTGGCAGTTGCAACTGGTGACTTTGGTTGTCCATTATCAAATCTTGACTTACGAATAATCGTATacgaatatttgaaaaaaaatgggCGTGAGGCAATTTTTCATGGAAATCTACCAGGAAAACAATGGATTTCGAGTTTTTTAGAACGAAATGCTTCAGAACTAACAGTAAGATCTtgccaaaatataaaaaaagcaagAGCCGAAAAAAGTGTTGAAGAATTTTTagattatttcaaaaatttagaAGAAACTATGAAAGACGTTCCCCCGTCAAACATATTAAACTTGGATGAAACAAATTTAAGTGATGATCCCGGATCATCGAAATGCATTTTTCGTAGAGGGGTAAAGTACCCTGAAAGGGTATTAAATTCAACGAAAGGAGCCATTTCATTGATGTTTTCGGCAAGCGCAGACGGAACGAACCTACCACCATATGTTGTGTATAAATCAGAAAATATTTATTCTGAATGGATAACAGGGGGTCCACGAGGCGCAAGATATAACCGCACTAAATCGGGGTGGTTCGATTCGTCCACTTTTGAGGACTACTTCAagacaatagttttaaaatggtCGGAAGGTTTGCCGGGAAAAAAGGTGGTCATATGTGATAACCTATCAAGTCATCTAAATGTGGACATTATCAAACTTTGCGAAGAGCATAACATATCTTTTGTTTTCATTCCTGCCAACTCCACGCATCTTACCCAACCCTTAGACGTGGCTTTCTTTGCTCCGCTTAAGAAAGCGTGGCGGAAAATTTTGCTGCAGTACAAAATGGAAAATCCCAATCAaacatctttaaataaaaatcatttcccgaagttgttgacgtctTTGATTAACGCAATAGACTTTACCAGAACAAACAATATCAAAAGTGGATTCAAAGCTACCGGAATTTGTCCTTTAAATCCACGTGAAGTACTCAAACGGCTGCCGGAATATGTTGAAGAACTTGGAAATTACACAGTTGATAACGCCTTATTAAATTACTTGCAAAAGTGTAGACAACCGAAAGCAGTGAGTGTAAAACGCAATAAAAAAGTTTCAGTAGAGCCTGGCAAGTCTGTTTCAATAAGCGATTTCGGTTTATTGAGTTGTTCAAATCAAGAAGTTACAGAGACTCAGACCTCTAAAAAAAACAATGGAGTTGGAgcgaaaaaatcaaaaacaacaaaaaaaaagacttctattacaaatcaagataATCCAGAAAATAATGATCCCGTATTTGACCTCTTTTTAGACAATACAGCTATTGGACAGCCAATAAACGATAAAGATGAAACCGCTGATATCTATAATTATTTGGAAGAAGATATTTTGAATGATAGCAATATACTGTTAAATCTGACATGTgacttttataaaattgataaacTTGAGGTATCGGACAGCAAAAAGGATGAAACTGTAACAAAGTGCATCTTAGATGAAAAAACTGTGATAATAGACACTAATAACTTTGACGAAATTAATGAAGTTAATGATGCGCCAGTACACAATGAAAACaaagtcggaacaagttgcactTTGGATAAAAATGGTAAGATAATAGCCATCAATGACAGTGATGACATATTCAATGATAACACCCATAAATTTACTGTTGAGTCTGAATACCAAGAGCAAGAGAATGTATCAAGATGCATTCTAAATGACAAAACTGGAGTTCTTCAATATACAATAGCCACCCGAGTGAAGCAAGTTATAAACAACAAACCAGTATTGCGAGATAAAATAAAGTTAACCTCATCTAAAGGCATGTACACTGAAACTGTGAAAggacctaagaaaacaagaacATTTAAAAATGACACCAAGATTGTATCTGACAACATTTGCCctaacattgtaaatattttaccACGTCGTAGCACATCTGATTATGGTAGCACACAACAAATTATAGACTCAAATGAAAAGAGAGAAGAATTAAAtgcaaacaatttaaatataaaaaagtacaaaaatactAAACATCACGAAAAGCTACAAGactcaaaacaaaatattttaaccgAAATAAATACTTCTACGAATGAAACTAAAGTTATTTTGGAGACTGGCAAAAATAATGGCAAagaaaacaaaacttttaaacatACTGATTTaaataacgaaataaataaatgtgcAGATAGAAAACAAAACACCAATCGAAAGTCCGGAAAGAAAATAACTAATCAaccaaagaaaaaaagaaaaagcaaCAAATCAACCATTGAACCAAAGACAAAACCAGCCCGCAGAACATACAAGAGAAATATAAGTGAAACAAGTAATAGTGATATCAACATTAGTACTCACAGTGATTCAGATATCTGTGATATAGAATCTGATAAGTCCGACAAAGACATTCAAAGTTTAAATACAAAACAGCCTAAAACAGAGTCAATGAAagataataaaacaacaatagcAACGGAAACAGAAAAACCTTCATCGAGCTACGACGACCATTTAAGTGAAGCTTGTTCTAATATCAATTATGCTGTTGGGGATATTATATTAGTCAGATACTTTTTTAAGAAAAAGGTTGATTATTTTGTCGGTAAAGTCATAGCAAATGTAGGAAATGATAGAGTAAATGCATCATTTTTCAGACGAACCGGTAGAAACGACAATACCAAGTTTATAAAAACCAAAAAACAAGAAGTAGAAATAATTGATTGTAAGAATATTGTCAAAACCGTGaatttacttacaattaataccaAAGAAACAGAGTTTGTtctagatgatgatgatgactacttatattttgattattag
- Protein Sequence
- MVKPKKQSRRRLGARYYKNYNDYMLDLAVGYVKNKKMSSREAEKYFGIPRRTLLNKVQELHQKKIGAPTRLTEEEEKNIVKVAVATGDFGCPLSNLDLRIIVYEYLKKNGREAIFHGNLPGKQWISSFLERNASELTVRSCQNIKKARAEKSVEEFLDYFKNLEETMKDVPPSNILNLDETNLSDDPGSSKCIFRRGVKYPERVLNSTKGAISLMFSASADGTNLPPYVVYKSENIYSEWITGGPRGARYNRTKSGWFDSSTFEDYFKTIVLKWSEGLPGKKVVICDNLSSHLNVDIIKLCEEHNISFVFIPANSTHLTQPLDVAFFAPLKKAWRKILLQYKMENPNQTSLNKNHFPKLLTSLINAIDFTRTNNIKSGFKATGICPLNPREVLKRLPEYVEELGNYTVDNALLNYLQKCRQPKAVSVKRNKKVSVEPGKSVSISDFGLLSCSNQEVTETQTSKKNNGVGAKKSKTTKKKTSITNQDNPENNDPVFDLFLDNTAIGQPINDKDETADIYNYLEEDILNDSNILLNLTCDFYKIDKLEVSDSKKDETVTKCILDEKTVIIDTNNFDEINEVNDAPVHNENKVGTSCTLDKNGKIIAINDSDDIFNDNTHKFTVESEYQEQENVSRCILNDKTGVLQYTIATRVKQVINNKPVLRDKIKLTSSKGMYTETVKGPKKTRTFKNDTKIVSDNICPNIVNILPRRSTSDYGSTQQIIDSNEKREELNANNLNIKKYKNTKHHEKLQDSKQNILTEINTSTNETKVILETGKNNGKENKTFKHTDLNNEINKCADRKQNTNRKSGKKITNQPKKKRKSNKSTIEPKTKPARRTYKRNISETSNSDINISTHSDSDICDIESDKSDKDIQSLNTKQPKTESMKDNKTTIATETEKPSSSYDDHLSEACSNINYAVGDIILVRYFFKKKVDYFVGKVIANVGNDRVNASFFRRTGRNDNTKFIKTKKQEVEIIDCKNIVKTVNLLTINTKETEFVLDDDDDYLYFDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01155064;
- 90% Identity
- iTF_01156289;
- 80% Identity
- -