Pgla036443.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- -
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000017.1:11206264-11208980[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-08 7.7e-06 27.4 0.0 1 38 27 64 27 66 0.95
Sequence Information
- Coding Sequence
- ATGAAGGAACGAAATCAAAAAAACCCCAATAAAAAGAAGTCAAGaggaaaaatagaaaaaagtaaaCGAAAACAATATAGtgaggaaaatataaaaaaagctttaGACGCGATTAAAAATGGCATGGCCAAAAAGCAAGCAGCGAAACAATATCAGGTTCCTCGAGCTACGTTACAATTTCGCATTAAGAAACCAGACCATAATCCTCAGCCTGGTCCGAGGCCAGTACTTAACGCAgatgaagaaaataaattaaagaattgGTTAAATGTTAGCCATGCAAAGGGTTTTCCTAAACGAAAAGAAGATCTTTTGAATAGCGTATCAGAATTTATAAGAAAAAGCGGCCGATCTAACCCGTTCAGAGACAACATTCCCGGCGATAAATGGTTTAAGCTCTTCTTACAGCGACACCCGGAAATTGTTGTAAGAACTCCTGAAGCTGTAACAGCGGCAAGTGCTGCCGTATCAGAAAATGACATAAAAGGATGGTTTCAAGCAATTGAAATATATCTAAGAGATCACGGTTTGTTTGAAATTCTATCAGATCCGAAAAGAGTATTGAATGGTGACGAAACCAGTTTTGTTCTCTGCGCAAAGACAGGTGTGGTCTTGGCACCAAAGGGTTCAAAGAATGTTTACGAAATCGACCACGCCCCAGCTAAAAGTTCACTAACAGTGATGTTTACTTTTGCTGCCAATGGTGAAATCACCCCACCTATGGTAATATTCCCGTATAAACGCTTGCCAAGTGAAATTGCTTCAAAGGTACCACCAGATTGGGGTATAGGCCTAAGTGAGAATGGCTGGATGAAAACTGAAATTTTCTCTCAATATATAGAAAAAGTGTTACATCCACATCTCGTGCAAAATGATGTACCATTCCCGGTCATTTTATTTGTAGACGGACACAAAACTCACCTCACTTATGCCGTCAGTGAGCTTTGTTCCTCACTGGATATTGTGCTCATAGCACTTTATCCCAATTGCACTCGATTACTTCAGCCTGCAGATGTCTCAGCTTTTAGACCTCTAAAAGGTGGTTGGCAGAAGACGGTCTTAGAGTGGCGGCGTGACAATCCATCTCGAGCTCTTACAAAAGTCGATTTTGTGCCATTATTGCAAAAAACTATTGATAAATGTGTAAAACCAGATACAATTATTAATGGTTTCCGGGCTACCGGTCTTTGTCCATGGGACTCAAATGCTATAGACTACTCGAAATGCTTGGGGAAAAATCTGAAGAATAAGCCCAAAAGTGAAGCAATACCGGAAACTTCGAGAATGATGACCAAAAAGGATTTTATCAGATATGCAGGACAGTCTACAATAACAGATCTTATAAACAAACAGGATTTGACAGCTGctgagaaaattttaaaaacctgtGaaGTAAGAAAACCGAATGAGAACTCTAATACAAATGGGAAAGTCAACAATGGTAATAAAGAAATCATTGAGAAAAGAACCTCGGATGTTagtcttaaagaacaagaccttTTGGACATTGAAAATATGGATGTAATTATGTGTGATGAATTTGATAGTACATGTCATATTCCTCTAGCTCAAGAAGTCTTCATTCAAGACATTGTTATCGACAACATAGAAGACATCACGGCTATAAATGATTCTCAAACTGATTCTTTTCCAAAAAACActgaaaacatattttgtaatacACCTAAAGTAGATATTCAAACAACTGAATGTGTACAAGTTACTCATACTGCACAAATCGaaacatataaagaaagaaaTGACTGCAGATTAGATAATAGTTCAAACAAAtccatttatataaataatgtagTTCGCCCAGCTCAACAGGATTTTAACAAAATTGAAGTTTTGGATACTGTAAGAAATCCAACTTTCACTACCCCTATGAAGATAAATCTACGAGAAACAAAACTAGATGACATATTAGTGCTACCTAAAACACCTCAAAGGAAGGGATTGAGACAAACTAAGAAGACGCCTTATGTAATTACATCAAAAGAGTTCATGGATGAAGAACGTAAAAAAATCATAGCAAAGAAAGAAAAGGAAGAAGGCATACAGAAACGAAAAGAACAacgacaacaaaaaaaaattgacaaagcTGAACAAATGCTAAGAAAAGAACAATGTGTCAAAAAGGAAGCATTATGCAATATGGATGAAGACGAGAAATCTAATGATGATGGTCTTATCAGAGCTAACAAAAACTTAAGCATAATTGAAATTGAGAAGATGTTGACCGATGATTACGATTag
- Protein Sequence
- MKERNQKNPNKKKSRGKIEKSKRKQYSEENIKKALDAIKNGMAKKQAAKQYQVPRATLQFRIKKPDHNPQPGPRPVLNADEENKLKNWLNVSHAKGFPKRKEDLLNSVSEFIRKSGRSNPFRDNIPGDKWFKLFLQRHPEIVVRTPEAVTAASAAVSENDIKGWFQAIEIYLRDHGLFEILSDPKRVLNGDETSFVLCAKTGVVLAPKGSKNVYEIDHAPAKSSLTVMFTFAANGEITPPMVIFPYKRLPSEIASKVPPDWGIGLSENGWMKTEIFSQYIEKVLHPHLVQNDVPFPVILFVDGHKTHLTYAVSELCSSLDIVLIALYPNCTRLLQPADVSAFRPLKGGWQKTVLEWRRDNPSRALTKVDFVPLLQKTIDKCVKPDTIINGFRATGLCPWDSNAIDYSKCLGKNLKNKPKSEAIPETSRMMTKKDFIRYAGQSTITDLINKQDLTAAEKILKTCEVRKPNENSNTNGKVNNGNKEIIEKRTSDVSLKEQDLLDIENMDVIMCDEFDSTCHIPLAQEVFIQDIVIDNIEDITAINDSQTDSFPKNTENIFCNTPKVDIQTTECVQVTHTAQIETYKERNDCRLDNSSNKSIYINNVVRPAQQDFNKIEVLDTVRNPTFTTPMKINLRETKLDDILVLPKTPQRKGLRQTKKTPYVITSKEFMDEERKKIIAKKEKEEGIQKRKEQRQQKKIDKAEQMLRKEQCVKKEALCNMDEDEKSNDDGLIRANKNLSIIEIEKMLTDDYD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01155079; iTF_01155080; iTF_01155072; iTF_00837450; iTF_00837452; iTF_01282198; iTF_00634299;
- 90% Identity
- iTF_01155072;
- 80% Identity
- -