Pgla057125.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Parnassius glacialis
Gene Symbol
clz9
Assembly
GCA_033319125.1
Location
JAVANC010000027.1:18763555-18766253[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-11 8.2e-09 36.9 0.0 4 39 28 63 25 68 0.91

Sequence Information

Coding Sequence
ATGGTGCGTACTTACCAAAGAAAGTACACTAATTTCAGAAAAGGTAAATCTTTTGCACCGTATCATAgttattcgaaaaaaaatttggaaaaagcGATAGAGGCTGTACAGTCTGGAAAACTTAAGTTAACCGAAGCTGCCGATATTTATGATATACCAAAGAGCACATTATGTAGAAAATATAGGAACATAAATTGCACGCAAGATAAAGCTGGACATCCAACATTGTTTACTCCCGAAGAGGAAAATTCATTTATACGaaacatattaattttaagtGAATGGGGATTTCCCTTCGACTGTATGGATTTTCGAGTACtagctcaaaaatatttgaacaaaATAGGCAAAAATATATATGGGCTTAAAAATAACTTACCAGGGACTGATTGGGCACGTAATTTTCTTTTAAGACATAAATCAGTAATTTCAAATCGTAAAGCGTCTAATATTTCTACTGATCGAGCCAAAATTACAAATTACGTAATTGACAgtttttttgaaaattatgtgAAGTCTGTTGAAGGTGTTACTCCAGACTGCATTATCAACTATGATGAGACCAACCTCACAGATGATCCCGGTTGtaaaaactatatttataaaaGAGGCACAAAGTATCCAGAAAGAATGGTAAATAATTCGAAAACAGCAATTTCGCTCATGTTTACGGGTACGGCACATGGTGAGTTGCTACCAATATATGTGGTATATAAATCAGATCATCTATGGGATACGTGGCTGGAAGGTGGACCTGAAGGGACGAGGTACAATCGATCAAGAAGTGGGTGGTTCGATGCAGTCTGTTTTGAAGACTGGTTTAATACCATTATAGTACCTTACACACGTAAGAAAGCAGGCCGAAAACTTCTAATCGGAGATAATCTGTCGTCTCATTTTTCGGAAAACGTACTAAAGACTTGTGAAGAAATGAATATTGCATTTGTGTGCTTACCACCGAAAACCACACATATGCTTCAACCATTAGATGTCGCATTTTTCGCTCCGTTAAAGACCTACTGGCGAGATGTATTAACTCATTGGAAGTTAATGGAAGGGCGGAAACATAAAACTTTGGTCAAAAGTTCATTTTCCAAATTATTGGGTCAACTAAAAAACAAATTGGTTGAAAGAGGTGCTGTATCTCGTAATCTCGAAGCAGGTTTTAGTAAATCGGGTTTATACCCAATCAACCCTGAACTTCCCAAGTCACGACTGCCACAAAGGGCAAATGTTACAGATCAACAAATAAATAACACTACATTATTAGTAGTAACAGACATTTTGCAAGAAATAAGGAATCCTCCAGCCCCTGCACAAATAAAACGAAAGAAGAAGTGTAATGTACAGCCCGGGAAAAGTATAACAGCAGCAGACTTGGTTCAAAGTGATCTTCATACAACTACgaagtcaaataaaaaaaaacaagaaaacccCAAGGGAATATGCGAAAACCCGAGACAAAATAATTTTGGTTGCTACGACTCTGACATGACTAGTGATATttctgatgaagaagaaaatgaaGACAACGAACaaaataaaagcaataaaaaacgaAAACTTAGGTTCAAGAAAATGAAAACAGATCAAACTATATACAAGACTGAAGAATGTGAAGATAATATTTCACTACACGAACAAATTGAAATTTCAGGAAAACAAGAATTAAAGTCATTAAACATACCTGAAGAAAACGAAATTTGTGATCAAAATGTATTCAAACAAAAAGATTTGGACATAATTACAGAGTGTACAgaagaaaattGGTTTATGCAAACTTTTATAACTACCACCGCCGTTATAGAAAAACAGAACTCTCCCGTCTTGTCTGATAAACCAAAATTGAAATCAAAAGCTCATAACGATTTTGAACAAGAAAAGACTAAAGTTgactataataatattaacactggttctaaggaaaatattgaaaatttctcAAATAATGAAATCATAGGCATGGTGAAACGTAAGTCACGTGCATACACttttagtaataaaacaaaaaataaaccggCCAAAAGATTAAACAAATTGCAAAGTACTGATTCAACAACTACTGAAGAAATTTCAATGAGCGTACACAGTGATAGTGATTTATATGACGTCGATCTTGaacaaattgaaaatttaaatgaCATTGACCTCGAACAGACAGATCTAGATATTTTCGATCTCGAAGATGTTGAGTTGGTAAAGAGAAAGAATGATGAGAGGGAAGCCGAAATATTTAATGACATTATGCGTATGGACGCAGAGAATGACACAGATAACAAAACAGAAATTAAGACGAGCTTGAATGAATGTGGATACTCAGAAATTCTTCTGAGAATTGAAGTAACAGATGAGGACAAGACTAAAGAACAATTACAGATTGAAAAAGAATTGCAGACTGAAAACAAAGACAAACCTAATTGTTTGAAACACAATATTGAAAAAAGAGAATGGAGCATAGGAGATAATGTTCTAGTTAGatattaccaaaaaaaaatgGCAATATTATATCGGCTTAATTACTGA
Protein Sequence
MVRTYQRKYTNFRKGKSFAPYHSYSKKNLEKAIEAVQSGKLKLTEAADIYDIPKSTLCRKYRNINCTQDKAGHPTLFTPEEENSFIRNILILSEWGFPFDCMDFRVLAQKYLNKIGKNIYGLKNNLPGTDWARNFLLRHKSVISNRKASNISTDRAKITNYVIDSFFENYVKSVEGVTPDCIINYDETNLTDDPGCKNYIYKRGTKYPERMVNNSKTAISLMFTGTAHGELLPIYVVYKSDHLWDTWLEGGPEGTRYNRSRSGWFDAVCFEDWFNTIIVPYTRKKAGRKLLIGDNLSSHFSENVLKTCEEMNIAFVCLPPKTTHMLQPLDVAFFAPLKTYWRDVLTHWKLMEGRKHKTLVKSSFSKLLGQLKNKLVERGAVSRNLEAGFSKSGLYPINPELPKSRLPQRANVTDQQINNTTLLVVTDILQEIRNPPAPAQIKRKKKCNVQPGKSITAADLVQSDLHTTTKSNKKKQENPKGICENPRQNNFGCYDSDMTSDISDEEENEDNEQNKSNKKRKLRFKKMKTDQTIYKTEECEDNISLHEQIEISGKQELKSLNIPEENEICDQNVFKQKDLDIITECTEENWFMQTFITTTAVIEKQNSPVLSDKPKLKSKAHNDFEQEKTKVDYNNINTGSKENIENFSNNEIIGMVKRKSRAYTFSNKTKNKPAKRLNKLQSTDSTTTEEISMSVHSDSDLYDVDLEQIENLNDIDLEQTDLDIFDLEDVELVKRKNDEREAEIFNDIMRMDAENDTDNKTEIKTSLNECGYSEILLRIEVTDEDKTKEQLQIEKELQTENKDKPNCLKHNIEKREWSIGDNVLVRYYQKKMAILYRLNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01154950;
90% Identity
iTF_01154950; iTF_01157597;
80% Identity
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