Pgla055430.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Parnassius glacialis
Gene Symbol
clz9
Assembly
GCA_033319125.1
Location
JAVANC010000026.1:33887141-33890047[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-12 1.5e-09 39.3 0.0 2 39 26 63 25 68 0.91

Sequence Information

Coding Sequence
ATGGTGCGTACTTACCAAAGAAAGTACACTAATTTCAGAAAAGGTAAATCTTTTGCACCGTATCATAGTTATTCGAAAGAAAATTTGGAAAAAGCGATAGAGGCTGTACAGTCTGGAAAACTTAAGTTAACCGAAGCTGCCGATATTTATGATATACCAAAGAGCACACTATGTAGAAAatatagaaacataaattgcacgcaaGATAAAGCTGGACATCCAACATTGTTTACTCCCGAAGAGGAAAATTCATTTATACGaaacatattaattttaagtGAATGGGGATTTCCCTTCGACTGTATGGATCTTCGAGTACtagctcaaaaatatttgaacaaaATAGGCAAAAATATATATGGGCTTAAAAATAACTTACCAGGGACTGATTGGGCACGTAATTTTCTTTTAAGACATAAATCAGTAATTTCAAATCGCAAAGCGTCTAATATTTCTACTGATCGAGCCAAAATTACAAATTACGTAATTGACAgtttttttgaaaattatgtgAAGTCTGTTGAAGGTGTTACTCCAGACTGCATTATCAACTATGATGAGACTAACCTCACAGATGATCCCGGTTGtaaaaactatatttataaaaGAGGCACAAAGTATCCAGAAAGAATGGTAAATAATTCGAAAACAGCAATTTCGCTCATGTTTACGGGTACGGCACATGGTGAGTTGCTACCAATATATGTGGTATATAAATCAGATCATCTATGGGATACGTGGCTGGAAGGTGGACCTGAAGGGACGAGGTACAATCGATCAAGAAGTGGGTGGTTCGATGCAGTCTGTTTTGAAGACTGGTTTAATACCATTATAGTACCTTACACACGTAAGAAAGCAGGCCGAAAACTTCTAATCGGAGATAATCTGTCGTCTCATTTTTCGGAAAACGTACTAAAGACTTGTGAAGAAATGAATATTGCATTTGTGTGCTTACCACCGAAAACCACACATATGCTTCAACCATTAGATGTCGCATTTTTCGCTCCGTTAAAGACCTACTGGCGAGATGTATTAACTCATTGGAAGTTAATGGAAGGGCGGAAACATAAAACTTTGGTCAAAAGTTCATTTCCCAAATTATTGGGTCAACTAAAAAACAAATTGGTTGAAAGAGGTGCTGTATCTCGTAATCTCGAAGCAGGTTTTAGTAAATCGGGTTTATACCCAATCAACCCTGAACTTCCCAAGTCACGACTGCCACAAAGGACAAATATTACAGATCAACAAATAAATAACACTACATTATTAGTAGTAACAGACATTTTGCAAGAAATAAGGAATCCTCCAGCCCCTGCACAAATAAAACGAAAGAAGAAGTGTAATGTACAGCCCGGGAAAAGTATAACAGCAGCAGACTTGGTTCAAAGTGATCTTCATACAACTACgaagtcaaataaaaaaaaacaagaaaacccCAAGGAGTGTACAGAagaaaattgttataaattagatataaacaaaaaaCTCTTAAAAAACGACGACACACACCTGGAATGGACGATTCAGAAACATATACTGAATGAAAAAACAGGGTTTATGCAAACTTTTATAACTACCACCGCCGTTATAGAAAAACAGAACTCTCCCGTCTTGTCTGATAAACCAAAATTGAAATCAAAAGCTCATAACGATTTTGAACAAGAAAAGACTAAAGTTgactataataatattaacactggttctaaggaaaatattgaaaatttctcAAATAATGAAATCATAGGCATGGTGAAACGTAAGTCACGTGCATACACttttagtaataaaacaaaaaataaaccggCCAAAAGATTAAACAAATTGAAAAGTACTGATTCAACAACTACTGAAGAAATTTCAATGAGCGTACACAGTGATAGTGATTTATATGACGTCGATCTTGaacaaattgaaaatttaaatgaCATTGACCTCGAACAGACAGATCTAGATATTTTCGATCTCGAAGATGTTGAGTTGGTAAAGAGAAAGAATGATGAGAGGGAAGCCGAAATATTTAATGACATTATGCGTATGGACGCAGAGAATGACACAGATAACAAAACAGAAATTAAGACGAGCTTGAATGAATGTGGATACTCAGAAATTCTTCTGAGAATTGAAGTAACCGATGAGGACAAGACTAAAGAACAATTACAGATTGAAAAAGAATTGCAGACTGAAAACAAAGACAAACCTAATTGTTTGAAACACAATATTGAAAAAAGAGAATGGAGCATAGGAGATAATGTTCTAGTTAGATATTACCAGAAAAAAAATTGGCAATATTATATCGGCTTAATTACTGACATTAATGAtcgaattgaaaaaaaatacaaaatatcctaCTACAAAACCATTTCTAAAAAAGGTGATATCTTATTTAAGAAACCAAAACGTTTAGATGTAGATTACATACCTGATGATATAATTGTAAAGCAAGTAGATTTGttgcaaattaatgaaaataatgaatTTATCTTGTTTAATGAtgaagatttattatatttttga
Protein Sequence
MVRTYQRKYTNFRKGKSFAPYHSYSKENLEKAIEAVQSGKLKLTEAADIYDIPKSTLCRKYRNINCTQDKAGHPTLFTPEEENSFIRNILILSEWGFPFDCMDLRVLAQKYLNKIGKNIYGLKNNLPGTDWARNFLLRHKSVISNRKASNISTDRAKITNYVIDSFFENYVKSVEGVTPDCIINYDETNLTDDPGCKNYIYKRGTKYPERMVNNSKTAISLMFTGTAHGELLPIYVVYKSDHLWDTWLEGGPEGTRYNRSRSGWFDAVCFEDWFNTIIVPYTRKKAGRKLLIGDNLSSHFSENVLKTCEEMNIAFVCLPPKTTHMLQPLDVAFFAPLKTYWRDVLTHWKLMEGRKHKTLVKSSFPKLLGQLKNKLVERGAVSRNLEAGFSKSGLYPINPELPKSRLPQRTNITDQQINNTTLLVVTDILQEIRNPPAPAQIKRKKKCNVQPGKSITAADLVQSDLHTTTKSNKKKQENPKECTEENCYKLDINKKLLKNDDTHLEWTIQKHILNEKTGFMQTFITTTAVIEKQNSPVLSDKPKLKSKAHNDFEQEKTKVDYNNINTGSKENIENFSNNEIIGMVKRKSRAYTFSNKTKNKPAKRLNKLKSTDSTTTEEISMSVHSDSDLYDVDLEQIENLNDIDLEQTDLDIFDLEDVELVKRKNDEREAEIFNDIMRMDAENDTDNKTEIKTSLNECGYSEILLRIEVTDEDKTKEQLQIEKELQTENKDKPNCLKHNIEKREWSIGDNVLVRYYQKKNWQYYIGLITDINDRIEKKYKISYYKTISKKGDILFKKPKRLDVDYIPDDIIVKQVDLLQINENNEFILFNDEDLLYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01154950;
90% Identity
-
80% Identity
-