Pgla038622.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- -
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000018.1:2368409-2386022[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-09 1e-06 30.2 0.0 4 39 124 160 121 164 0.88 2 2 5.2e-05 0.016 16.8 0.3 2 27 176 201 175 201 0.94
Sequence Information
- Coding Sequence
- ATGTACGACGTGCAGGTGCGTGAGGAGCTGGAGTTGAGCCCAGCGCCGGCCGCGCCCGCCGCCACGCCGGTgcgcgcgcgccgcgccgcctCGCCGCGCGCCTCGCCCGAAACCCTGGAGACGCTCGAGCCTGCCCGCACTACACCAGGAACGACGCTTCTAGAGAGACAGATGCAGTTACTTGGCACAAGTGAAGAGGACTCGGACTTCGTGCCGCTGCTACCCAAAGTTAAAGACGAGCCCTTGTCAGAGGGAGAACAACTACAGTTGAGTGATGAGGCGAGCGAAACTAACGGAGTAGGAGTAGGGGGTGAAGGTGGGGAGGGGGAGGCGCGCAGCAGCCCCGGAAGCAAGGGCTGGGCGCCGCGAGACATGGAGTGTGCGCTGCAAGCCCTGCGAGACCGTCGCATGAGTCTCACCAAGGCGTCGGCGACGTACGGCATTCCGTCCACAACGCTATGGCAGCGCGCGCACCGGCTGGGCATCGACACACCAAAGAAGGACGGCGGCGCCAAGAACTGGAGCGATGCGGACCTGCGCGCTGCGCTGCACGCCCTGCGCGCCGGCACGCTTTCCGCCAACAAGGCCAGCAAGGCTTACGGTTAG
- Protein Sequence
- MYDVQVREELELSPAPAAPAATPVRARRAASPRASPETLETLEPARTTPGTTLLERQMQLLGTSEEDSDFVPLLPKVKDEPLSEGEQLQLSDEASETNGVGVGGEGGEGEARSSPGSKGWAPRDMECALQALRDRRMSLTKASATYGIPSTTLWQRAHRLGIDTPKKDGGAKNWSDADLRAALHALRAGTLSANKASKAYG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -