Basic Information

Insect: Parnassius apollo
Gene Symbol: -
Assembly: GCA_907164705.1
Location: CAJQZP010000945.1:1747673-1811993[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.1 10 7.4 1.1 1 19 274 292 274 294 0.93

2 17 0.73 74 4.7 0.4 2 20 377 395 376 396 0.88

3 17 5.2 5.2e+02 2.1 3.5 2 23 403 423 402 423 0.92

4 17 0.11 12 7.3 5.4 1 23 936 958 936 958 0.97

5 17 0.064 6.5 8.1 1.8 2 23 964 985 963 985 0.96

6 17 0.34 35 5.8 2.4 3 23 1077 1097 1076 1097 0.91

7 17 2.2 2.2e+02 3.2 0.1 3 23 1115 1135 1114 1135 0.94

8 17 2.2e-06 0.00022 22.1 2.1 1 23 1141 1163 1141 1163 0.99

9 17 0.1 10 7.4 1.6 1 23 1168 1190 1168 1190 0.97

10 17 0.0029 0.3 12.3 1.8 2 23 1197 1219 1197 1219 0.95

11 17 0.00057 0.058 14.5 0.8 3 23 1258 1278 1257 1278 0.97

12 17 0.00055 0.056 14.6 3.1 2 23 1285 1307 1285 1307 0.96

13 17 5.7 5.7e+02 1.9 0.2 1 20 1311 1330 1311 1331 0.88

14 17 0.0017 0.17 13.0 1.0 3 23 1343 1364 1342 1364 0.95

15 17 2.4e-05 0.0024 18.8 1.1 2 23 1371 1393 1370 1393 0.95

16 17 0.26 27 6.1 0.4 1 20 1398 1417 1398 1421 0.93

17 17 0.0012 0.12 13.5 2.0 3 23 1430 1450 1429 1450 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.1	10	7.4	1.1	1	19	274	292	274	294	0.93
2	17	0.73	74	4.7	0.4	2	20	377	395	376	396	0.88
3	17	5.2	5.2e+02	2.1	3.5	2	23	403	423	402	423	0.92
4	17	0.11	12	7.3	5.4	1	23	936	958	936	958	0.97
5	17	0.064	6.5	8.1	1.8	2	23	964	985	963	985	0.96
6	17	0.34	35	5.8	2.4	3	23	1077	1097	1076	1097	0.91
7	17	2.2	2.2e+02	3.2	0.1	3	23	1115	1135	1114	1135	0.94
8	17	2.2e-06	0.00022	22.1	2.1	1	23	1141	1163	1141	1163	0.99
9	17	0.1	10	7.4	1.6	1	23	1168	1190	1168	1190	0.97
10	17	0.0029	0.3	12.3	1.8	2	23	1197	1219	1197	1219	0.95
11	17	0.00057	0.058	14.5	0.8	3	23	1258	1278	1257	1278	0.97
12	17	0.00055	0.056	14.6	3.1	2	23	1285	1307	1285	1307	0.96
13	17	5.7	5.7e+02	1.9	0.2	1	20	1311	1330	1311	1331	0.88
14	17	0.0017	0.17	13.0	1.0	3	23	1343	1364	1342	1364	0.95
15	17	2.4e-05	0.0024	18.8	1.1	2	23	1371	1393	1370	1393	0.95
16	17	0.26	27	6.1	0.4	1	20	1398	1417	1398	1421	0.93
17	17	0.0012	0.12	13.5	2.0	3	23	1430	1450	1429	1450	0.97

Sequence Information

Coding Sequence: ATGAACTCGATTGACGGTTTAAAAACCTCAGGCGATGATATGACTGACATAAAGGGATTTTTGAATAAGAAACAAATGGATGATAATAGTAAGGGTATTGCTAAAGACATTGTAATCTCATCTCTACCAATAAAGTGTTCTGTTAGTGTGAAAGTAGAAAAATGTGATCATGATTCTATGAATGAAAATGGTCCAGTTAAAGAAGTTGTTAATTATGGTGGCACATTCAGCATGGATGAATGTGGTCTTAATATATCTGAACCTGCAGGAATTGGCACAGAGGATGTGGGTAAAAAGTATACAATAAGAAAAGTTTTAGCAAGAaatgaaaaggaaataaaaagtAGAGTAGTGCCTGTAAAGCAGTATACTATAACAAGAACTTCGATATTAAAAGCTGTTGAGGAGCAAGCAAAAGAGAATACTAGTTTAGCTGACAAATACCTAGATATAGCTGTTAGGAAtttttatggtgaatgtagagatacTCCAAAAACATTTCATGATAAGCTTATCTATGATGTATTTGAAAGATGGAAAGATTGGTATGAGACACATCCTGAGTTTAGAGGTTCACCTTTGTTGTACATGTGTTATATTTGCAAAATAGGCTGGTGGAGACTGCACCCATTTAGAGAACATATGAAGAGCCATGgtgaaaatacatttaaaatcagaaCTTTACCAAGAGATCAAGAGTTTTACATGGAAGCATTTTCTAACCGGGTGCTTAGACCTATAGATATAAACATTATTTCTAATTGTTTGAAATGTGGTAAACCGGACAAATATCATAACTTCAGACGTCGAACGGCAAAATATAAGTGTAAAGGTTGCGATGCTGTATTTTTTACATGCAATAAACTCGATGAACATGAGGGTATGTGCATGTTATATATGAAAATGAAATGTGACAAATTAGGAGTAGAGATGACAAGTGATTTCAAAACATGTCCAGTGTGTTTCCGATACTGTCTAACTCAAATGGAACTTGACACCCATATGACTGACCGACACTCAGTACATTCAGATGATCCAATTTTAATGCAAGCAAAGTTATGCAGTGCTTGCAATACAAAGTATCATATTTACAAATTCCATGACTGCCCgggaagatataaaaatataaagtgcGAATTTTGCTTTAGGAAATTCACTACCATGTCGTTGCAGTACATGCACATAATATTCTCTAAGAGACTTGTTAAGTGTACAGTTTGTGACAAGTCCATGTATCAGTGTATGCTTCTGGAGCATATGTTGCATCACTCTAAGAATTACATGCTTGTGCCCTGGTGTAGTAAatgtaaaaacaatttattacacATTATAAACTCTTTTTACGAAAATCATATTATGAAGAGCCATGGGAGATGGGTGGATAGAAAGAAATGGGGTGCAAAGATGTTAGTACCTATGAAATGCATTACTGGAGAGATTGTTCACTCGGAAACAGTTCTTAATATTCCTGAGAAAGACTTAGAACTTTTTATGAGTGGATTGGAAGACGATGGAAGTAATTCCGAAGAAGTCGATGACGACATTATAATCTTAGATGATGGTGGGCCTATGCCAGTTTTGCCAAATGAAAGTAAAAAATGCGATATAAATACACTGCAAGAACAATTAGATGCAGAAGTACAAAAGTATGTTGAAATGGATGCAGCCATATCTAAAGTTTTCAAAACATCCAATTGCTATCGGAGGTTCACGGAAAAGGAAACAGAACAACCTTTGGAGGATAATAtgtatgatgataatgatgatgatgaccttatTCTTCTTAACAACTCTGATGAAGTAACAATAATATCAGATTCTGATGACGAAAACGAGAATGAGAACTCTAAAGAATTTGTAGAAGACaatgttaaaattataaattctatAGAAAGAAAAGAATCTAATACAAATTTAAATACGAAAGTGAAGGAAGAACCGAACGATGAAGCAAATATTTCATGTCGGAAAGATGGTACAATAGAAGCACATCCAGAGCATAACACAAAAGTTGACAATTTAATTGCAAAAGATAATTCTGTAATAGAAAGTTATAATGTGGTGAAAGAGTCTCATTCAGGTCAATCAAGTATTGTCAAAGGAAGAAAGGAAGATAAAAGTACATGTGCGCAAAACGAAGCTTGTAATACGGATTTCAGAACTGGCATGAAAGAGAAACTAAAACATGACAATTTAAGGTCGTGTCTGGGTAATGGCACAAATGCGTCATACCTACAAGACAAATATTGCAGTTTGAGGCATAGTATAGAAGTAAAAGTAGAACCAGGAGACGTTTCATGTCTACAAGATACAGAATTAAATTTACATCATAGTACTGATATGAAAGAAGAACGAGAAGACGAAATAATTATGTCACATTCAAGTGTAGATTCAAATGCATCATATCCACAAGACGTAGAATTTAATTTGAATCATACAACTGAAGTAAAGGTAGAGGCAATAGATGATATAGTTATGTTTCATTCAGGTGATGAAACTGCGTTATGTCCACAAGAGGTACATTATGACAAGGTTAATAAAATCGGGATGAAAGGTCTATTATGTGATGCGGCATTATCGTGTGGCGAAAATAAGCGGCTAGCAAAGAAGAAACGTAacgaaaacttaaaaaattatactgtTACAGGAGTATCAGATAAGGGGGATGCGGGAGAACCTATTAAAGAGAAACATGATATATCTATTTTAAACCTTGAAATCTTCTATGCATGTAAAAAGTGTCCGTTTCGGGGGTGCTACAATGAATATATTGAACACATAACTTCGAGTTGCGTTGCTATGTCTTTTTGTTGTTCAACTTGTACTATAGTGTTTTCGACTTTAAAACTTTACGTGCACCATTTAACACGGcataattacaaatttttaacATGTCCCACTTGTAAACAGCAGTTTAACGAGGACTCGAGGTTGTGCTCACATATAATTTCACACTTAAAAAACTTCTACATGAAGTCGCAAGATGTACAAAACATGGATCTATCACCTTCACAAAAGAACGATATCCTTCAGTGTATTGAATGCAAGAAAATTATTAAATCAGAACAAATCTTCATTCATTGGGACTTGcatttgaaaatgaaaaatgataagAGAAAAGCAGATCATAATAAGGATAGTGATGATGAAGCGGAAATGAACTCCAAACTTACAAAAGAACTCTTAGATATACTCTTAATAAAGAAAACAATTAATATGCCCAGAAAATGCATTGTCTGTAACAAAACCTTTCCTAGACCAAGAGATTGCAAGCGGCATTTTATCATGCACCTTCTCTTCCAAGCGTTAAGATCTAAAGTAAAAAACAACAACCAGTTACTGTGCCAGCTCTGCGGCGCTGACCAGAACAGTCCAGCTAAATATAAGGAGCACATGAGGGAGCATGCTTCCATGGCCATATATAAATGCCGAATTTGCGCCAAAACCTTCAATGACAACAGCAACTATTCCAAACACATGAAAGTGCACAATCTGTGTTCATTTATCTGTGACAAGTGTGGTGCAAAATTTCTCGTGAAGAAGTGCCTAATTGACCATTTGcaaAAACACGAAGCACGCCCGCCCGCCACTTGCCTACAGTGTGACATGTCATTTTTTACCGAAGCAAAGTTGAAAAGACACTTAAAATACAAACACATGCGCGATTGCAGGTATTTTGCATGTATGATATGCAAGAAGAGGTTAGGGAGCTTGAAGGAGAAATGGGACCACATGTGGCTGGAACACCAAGAGAGGAACATCGAAGCGGACTGCTCTATATGCAACATGAAATTCAGAAAAATCAGTGACCTTAAGCAGCACTTAATGGAGCATGAAGCACGCCCGCCCGCCACTTGCCTACACTGTGACATGTCATTTTCTACCGAAGCAAAGTTGAAAACACACTTAAAATCAAGACACAATCGGAATTATGCATGTATAATATGCAAGAAGAGGTTCGGGAGCTACAAGGACAAATGGGACCACATGTGGCTGGAACACCAAGAGAGGAAGACGGTAGCAGATTGCTCTTTATGCAACATGAAGTTCAGAAAAACCAGTGACCTCCAGCAGCACTTAATGGAGATGCACGAAGCACGCCCGCCCACCTCTTGCCTACAGTGTGACATGTCATTTTCTACCGCAGCAAATTTGAAAAGACACTTAAAATACAAACACATGCGCGAGTATTTTGCATGTTTGATATGCGAGAAGAGGTTCGGTAGCTACAAGGACAAACGGGACCACATGTGGCTGGAACACCAAGAGAGGAAGACCGTAGCAGATTGCTCTTTATGCAACATGAAGTTCAGAAAAACCAGCGACCTCAAGCAGCACACAAGGGCGCACACATTTGCTACACTTAAGCCGTAA
Protein Sequence: MNSIDGLKTSGDDMTDIKGFLNKKQMDDNSKGIAKDIVISSLPIKCSVSVKVEKCDHDSMNENGPVKEVVNYGGTFSMDECGLNISEPAGIGTEDVGKKYTIRKVLARNEKEIKSRVVPVKQYTITRTSILKAVEEQAKENTSLADKYLDIAVRNFYGECRDTPKTFHDKLIYDVFERWKDWYETHPEFRGSPLLYMCYICKIGWWRLHPFREHMKSHGENTFKIRTLPRDQEFYMEAFSNRVLRPIDINIISNCLKCGKPDKYHNFRRRTAKYKCKGCDAVFFTCNKLDEHEGMCMLYMKMKCDKLGVEMTSDFKTCPVCFRYCLTQMELDTHMTDRHSVHSDDPILMQAKLCSACNTKYHIYKFHDCPGRYKNIKCEFCFRKFTTMSLQYMHIIFSKRLVKCTVCDKSMYQCMLLEHMLHHSKNYMLVPWCSKCKNNLLHIINSFYENHIMKSHGRWVDRKKWGAKMLVPMKCITGEIVHSETVLNIPEKDLELFMSGLEDDGSNSEEVDDDIIILDDGGPMPVLPNESKKCDINTLQEQLDAEVQKYVEMDAAISKVFKTSNCYRRFTEKETEQPLEDNMYDDNDDDDLILLNNSDEVTIISDSDDENENENSKEFVEDNVKIINSIERKESNTNLNTKVKEEPNDEANISCRKDGTIEAHPEHNTKVDNLIAKDNSVIESYNVVKESHSGQSSIVKGRKEDKSTCAQNEACNTDFRTGMKEKLKHDNLRSCLGNGTNASYLQDKYCSLRHSIEVKVEPGDVSCLQDTELNLHHSTDMKEEREDEIIMSHSSVDSNASYPQDVEFNLNHTTEVKVEAIDDIVMFHSGDETALCPQEVHYDKVNKIGMKGLLCDAALSCGENKRLAKKKRNENLKNYTVTGVSDKGDAGEPIKEKHDISILNLEIFYACKKCPFRGCYNEYIEHITSSCVAMSFCCSTCTIVFSTLKLYVHHLTRHNYKFLTCPTCKQQFNEDSRLCSHIISHLKNFYMKSQDVQNMDLSPSQKNDILQCIECKKIIKSEQIFIHWDLHLKMKNDKRKADHNKDSDDEAEMNSKLTKELLDILLIKKTINMPRKCIVCNKTFPRPRDCKRHFIMHLLFQALRSKVKNNNQLLCQLCGADQNSPAKYKEHMREHASMAIYKCRICAKTFNDNSNYSKHMKVHNLCSFICDKCGAKFLVKKCLIDHLQKHEARPPATCLQCDMSFFTEAKLKRHLKYKHMRDCRYFACMICKKRLGSLKEKWDHMWLEHQERNIEADCSICNMKFRKISDLKQHLMEHEARPPATCLHCDMSFSTEAKLKTHLKSRHNRNYACIICKKRFGSYKDKWDHMWLEHQERKTVADCSLCNMKFRKTSDLQQHLMEMHEARPPTSCLQCDMSFSTAANLKRHLKYKHMREYFACLICEKRFGSYKDKRDHMWLEHQERKTVADCSLCNMKFRKTSDLKQHTRAHTFATLKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -