Basic Information

Insect: Parnassius apollo
Gene Symbol: ttk_5
Assembly: GCA_907164705.1
Location: CAJQZP010000885.1:13629009-13708800[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.067 6.8 8.0 0.0 2 23 521 543 521 543 0.90

2 6 0.00029 0.029 15.4 0.9 1 23 554 577 554 577 0.94

3 6 0.00032 0.032 15.3 2.7 1 23 587 609 587 609 0.97

4 6 3.6e-06 0.00037 21.4 2.1 1 23 763 785 763 785 0.97

5 6 4.5e-06 0.00046 21.1 0.2 1 23 791 813 791 813 0.98

6 6 2.8e-05 0.0028 18.6 3.3 1 23 819 841 819 841 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.067	6.8	8.0	0.0	2	23	521	543	521	543	0.90
2	6	0.00029	0.029	15.4	0.9	1	23	554	577	554	577	0.94
3	6	0.00032	0.032	15.3	2.7	1	23	587	609	587	609	0.97
4	6	3.6e-06	0.00037	21.4	2.1	1	23	763	785	763	785	0.97
5	6	4.5e-06	0.00046	21.1	0.2	1	23	791	813	791	813	0.98
6	6	2.8e-05	0.0028	18.6	3.3	1	23	819	841	819	841	0.98

Sequence Information

Coding Sequence: ATGTTAAGGAAACTGGATGGCGAGCCCTCCAACCCGTCTGTATTGACGACCGTCGTCGGATGGAACCCGGAGTGCGCCGATTCGCATCAAGcggCGGGAGCTAGCTCAGACATGGGAAGTGAGCACTATTGCCTGAGGTGGAACAATCATCAGAGCAACCTGCTGGGAGTATTCAGCCAGTTGCTGCACGACGAGAGCTTGGTGGACGTTACGCTCGCCTGTTCCGAAGGTGCCTCCATAAGGGCTCATAAGGTAGTACTGTCAGCGTGCTCATCGTACTTCCGATCGCTGTTCGTAGACCATCCATCGCGCCACCCTATCGTAATCTTGAAGGACGTTGGCTTAGAAGAGCTGCGAACGCTGGTCGACTTCATGtacaagggcgaggtcaacgtcCAGTATTGTCAACTGCCTGCTCTCCTTAAAATTGCTGAGAGCCTTCAGGTCAAAGGATTAGCTGAAATGACCACTTTAAGCGCAGCCGGCATTGACACTCGAAACGTTCCAGAGCCGATGGAGGAGGGTCATCCTCAAGATATGAGAGAATGTACAGAACCGCTCGAAAGATTAGATAATAGAGAAACTAGGGTAAAAGAAGAAAGGCGGGATGTCAAAGAAGCTAGAGAAAGAGATTGTAAAGAAAGTCGCGACGGAAGAGACAATCACACAAGGGAAACAAGAGAGGGTAGAGATTTGCAACGAGAAAGAGAGCAAAGGGATCGTGAGTTAAGAGAGTCTCGTGACCATAGAGAAATAAGGGAATCGAGAGAAACTCGCGAACTGCGGGATTCCAGAGACCACAGAGAGTTAGGTGACTCAAGGGATAATTGGGAACCACGAGATTTACGGGAAGTACGTGATCCGAGAGAATTGCGAGATACACGTGATCCCAGGGAGATGCCAGACGCATCGCCTCCTAGAATATCTCCTTTGCTGTCAGTCCGCAGATTTAGGTCAGAAACCTCGATCGAAACGCCAACTCCCACACATCCACCTATACCAAAAGACGAACCACCGGACGAACCTATAGGTCCGCCGTCAACTGAAGAAGATACAGTATCAATAAGATCGAACGGTGCAAATGAAAATATTGGTCTCAACATGACTATAAATAGTCACAGTAGTGGGAGCACACTGGGACCGCGATATTCACCTGTGGAGCAGAGATTGAGTGTACTGAATGCATTGCCACATCCAGGGCTCGCTCATCCGACACACCCATCTCTAGCAAGTCCAAGAAATGAACCTATTGCTGGCCCTTCTGGCTTACCACCAGTACAACAGGTGCCGTTATCTCTGAAAAAAGAAATAGATTGGGAAAGGAGTAATGAAGATAAAGTTGGTGAACCATCAGCTGAATTCCGGATGCAACATGAAACAATGTGTTTGGACATGTCATGTGGATCGCCCAGCATTCCGAGTCCAATTCCACCACGAAGCCCCACGGCCCTGCCCCTGTGGTCTCCATTGCTGGCTCTGCAAGCATGCCGCCTACGCAGGTATCTCAGTGATGATTGTATGACGTATCAAAGCCGTCATTTGCTCCATTCTGAAAGACGTCGATGTGGCGTCTGCCTCGCTTCTTTTCCGTCGTCCTGGCTCCTTGAACGCCACGCCGCTCTTCAACATGCCTCACAAACGTCCTGTGACGATAAGCCCTTCGTATGCGAACAGTGTGGACAGAGTTACAGATACAGGTCCGCATATGTCAAACATCGAGAGCAAAACCACCGCGCGCGACTACCTGCCGATAAGCTATTCACGTGCGATGTATGTGGCATGCAATTTCGATACCTCAAGTCATTCAAAAAGCATCGCCTAAATCACACATTGGAAAGACTACACACGAAAAATACAGACGCTATTGAAGGCATGGATCAAGTTTCCAGTACTAACGAAGTATTCGGTCAATGTGGAGAAATGGACCTATCTATAAAAAAGAGAAACAGGCCTGAAGTCGCAAGAACTCCGCCGATTGAAGTGATCGGTGACGGCGAACAAGACAGCACGGTCGATTCCAACGGACCCACCGACTCTATAGTGACCGTTGACGATTCTACTGACTGCAGAAATTCCAGTGCCGAAAGTGAAAACAAGAGAGACGTCGACACCCCTAAAAGTGAAAGACGACGCATTCCCGTCTCTTTTGCCAGCGTCAGTTCAATGGCGGACAGCTCCGAGGGCGAGTCCCGTAATGATAGCAACAAAATGGAAAGTTCCAGTGCACATTCTGGTATCCTAGGATTCTTGCAAAACGATGATAGGCAAAGAGAGCGGGAGAGGAGATTCGCCTGTCCGTTCTGCGGGAAGTGCGTGAGGTCTAAGGAAAATTTGAAATTACACGTACGAAAGCATACGGGGGAGCGGCCGTTCGTGTGTCTTTTTTGCGGAAGGGCCTTCGGTGGTAAAAGCGACTTGACGCGTCATTTACGCATCCACACCGGTGAGAGGCCCTATCACTGCGAAGCGTGCGGCAAGTGCTTCGCCAGAGCCGACTACCTCTCGAAGCATTTAACCACGCACGTACACAACGCCCGCTAA
Protein Sequence: MLRKLDGEPSNPSVLTTVVGWNPECADSHQAAGASSDMGSEHYCLRWNNHQSNLLGVFSQLLHDESLVDVTLACSEGASIRAHKVVLSACSSYFRSLFVDHPSRHPIVILKDVGLEELRTLVDFMYKGEVNVQYCQLPALLKIAESLQVKGLAEMTTLSAAGIDTRNVPEPMEEGHPQDMRECTEPLERLDNRETRVKEERRDVKEARERDCKESRDGRDNHTRETREGRDLQREREQRDRELRESRDHREIRESRETRELRDSRDHRELGDSRDNWEPRDLREVRDPRELRDTRDPREMPDASPPRISPLLSVRRFRSETSIETPTPTHPPIPKDEPPDEPIGPPSTEEDTVSIRSNGANENIGLNMTINSHSSGSTLGPRYSPVEQRLSVLNALPHPGLAHPTHPSLASPRNEPIAGPSGLPPVQQVPLSLKKEIDWERSNEDKVGEPSAEFRMQHETMCLDMSCGSPSIPSPIPPRSPTALPLWSPLLALQACRLRRYLSDDCMTYQSRHLLHSERRRCGVCLASFPSSWLLERHAALQHASQTSCDDKPFVCEQCGQSYRYRSAYVKHREQNHRARLPADKLFTCDVCGMQFRYLKSFKKHRLNHTLERLHTKNTDAIEGMDQVSSTNEVFGQCGEMDLSIKKRNRPEVARTPPIEVIGDGEQDSTVDSNGPTDSIVTVDDSTDCRNSSAESENKRDVDTPKSERRRIPVSFASVSSMADSSEGESRNDSNKMESSSAHSGILGFLQNDDRQRERERRFACPFCGKCVRSKENLKLHVRKHTGERPFVCLFCGRAFGGKSDLTRHLRIHTGERPYHCEACGKCFARADYLSKHLTTHVHNAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00943167;
90% Identity: iTF_01154230;
80% Identity: iTF_01154230;