Basic Information

Insect: Parnassius apollo
Gene Symbol: ZNF219_1
Assembly: GCA_907164705.1
Location: CAJQZP010001402.1:6033212-6048582[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.014 1.5 10.1 2.6 1 23 135 157 135 157 0.98

2 12 7.2e-05 0.0073 17.3 2.4 1 23 200 222 200 222 0.99

3 12 1.2e-06 0.00012 22.9 0.8 1 23 235 257 235 257 0.98

4 12 2.9e-07 2.9e-05 24.9 0.9 1 23 263 285 263 285 0.98

5 12 0.0006 0.061 14.4 5.0 1 23 291 313 291 313 0.97

6 12 8.4e-09 8.5e-07 29.7 1.5 1 23 319 341 319 341 0.96

7 12 9.1e-05 0.0092 17.0 0.5 1 23 347 369 347 369 0.97

8 12 0.00012 0.013 16.6 2.8 1 23 375 397 375 397 0.96

9 12 6.2 6.3e+02 1.8 0.2 1 10 403 412 403 414 0.85

10 12 0.14 14 7.0 1.2 13 23 639 649 634 649 0.85

11 12 2.4e-07 2.5e-05 25.1 1.3 1 23 655 677 655 677 0.99

12 12 0.0019 0.19 12.9 1.1 1 20 683 702 683 705 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.014	1.5	10.1	2.6	1	23	135	157	135	157	0.98
2	12	7.2e-05	0.0073	17.3	2.4	1	23	200	222	200	222	0.99
3	12	1.2e-06	0.00012	22.9	0.8	1	23	235	257	235	257	0.98
4	12	2.9e-07	2.9e-05	24.9	0.9	1	23	263	285	263	285	0.98
5	12	0.0006	0.061	14.4	5.0	1	23	291	313	291	313	0.97
6	12	8.4e-09	8.5e-07	29.7	1.5	1	23	319	341	319	341	0.96
7	12	9.1e-05	0.0092	17.0	0.5	1	23	347	369	347	369	0.97
8	12	0.00012	0.013	16.6	2.8	1	23	375	397	375	397	0.96
9	12	6.2	6.3e+02	1.8	0.2	1	10	403	412	403	414	0.85
10	12	0.14	14	7.0	1.2	13	23	639	649	634	649	0.85
11	12	2.4e-07	2.5e-05	25.1	1.3	1	23	655	677	655	677	0.99
12	12	0.0019	0.19	12.9	1.1	1	20	683	702	683	705	0.94

Sequence Information

Coding Sequence: ATGGGGGATTTAACAATTACATGTCGAACTTGTATGAAAAGTTCTGATAATTTGGTAGATTTGTTTGGGCCTTTAAAAATTGAGGATAATTATAATACTCTCCTAGCCGATATCTTGATGTTCACAACAGCAATTCAGGTATTGAGAGATGACGGATTGCCACGAAGTATCTGCAGTGAATGTGTAAACATACTTGAAATGTTTGTGATATTTCGTAATAATGCTCTGAAAAGTgaagaacagttgaaaaagttactgttgttacAAAGTACTCTAAAAGAAGAATTGAAGGATGATGCTACATGTGTAGAACCAACTGATgaaagtattaaaatatgtcCAACGAACCCTCAAAGTAATGAGTTGGGTGatgaaactaaaattaaaaccGAGGCAAATTTATATGTATGTGATAAGTGCGAAAAGCAATATATAAGTCACAAAAGATTTTTAAATCATTTAGCAACCCATGGTGAATCATCTATCACCAAGCAAATTGATGTTGAGGTGAAGTCAGAACCCATCTTCAATGACAGCTTAGATGATAATGTTAGTGAATCAGCAATCTTAGATATTGAAACAGATAGTAGAGATGAATATAAATGTAATGAATgtaatcaaatattttataaagaaagaTCTCTCATATCACATCGAAGAAAACATAggaactgtaatttaaaaaatgatgGTAATTCTAGGTTTGAATGTGATTATTGTGGCAAAGAGTTTTCTATGAAACCACTTTTAAAAagacatttaaaattgcattcaATTGATCGACCATTCATATGTCCAAAGTGCCCAAAAAGATATACAAGGCAAGACCAATTACTGGAGCATATGAAAAGGCATAATAAAGTTAAAACCCACATTTGCACATATTGCAATAAAGGATTTTTCCAGTTGTGTAGCCTGAAAGACCATCTCCGTGTCCATACCAAAGAAGCTCCATACTTATGCTCCGAGTGTGGCAAAAGCTTTTCGAGTAATTCCAATCTACGCCAACATATGAATAGGCACACGGGTATTAAGCCCTTTGCTTGCACATTTTGTCCAAAAGCTTTCACTACTAAAGgtcaAATGATGGGTCACTTAACAACACACACCGGTGCCCATCCCCACAAATGCGACGAGTGTGGCGCTAGCTTTACAAAGCTCAATTCATTGAAGAAACATAAATTTATCCATCTTGAAATCAAAGCGTTTGCCTGTGATACTTGCAATAAGAGcttaaataaaattatggaagGACGAGGTAAAAGATTAGTGCGGTTGGAACAATTATCGAACAATGAAAGCCATAATCAAGTTGAAGTCCCTAATATAGAATCTACATTATCGATAGCAAGTTCTTCTTCCATTTTAAACCCTTATGATGGTGACCTAACAAAACATTATGTTACAAAGAAGTTTGAAACTTCAAATGTATATGATGATAAAACTCAGCCTAGAGTTTCCTACAATGAAAATTTACCTGGACATGGCTTTTCTGGAACTAATGATGATTATCAGTACGTGCCTAAATCATCATCAAGTAGCAGCTCTAGCGGCAGCTCTAACAGCAGCTCAGGAAGTTCGTCATTGGAATCTGACCATGAAACACCCAGACCATCGACCACAAAATGTGGTAGAAAACGTATCACTGAAAGAGTTTTGCGTACAGTTATAGAATGCAAGCATGATGATGAAGGCCATAATGTTATGAAAGAAGATGGAAGAGGAAAACACGGTAAACAAATCCGATTGGACGAAGAAATAAAACAATCTCAAAAGAATAAGTACATGTTTTGTATGTACTGCTATGCTATTAATATGTTACCGATAAATTCCTGCGGCCTTTATGACGTTGTTGCACGGACatgttctatttttaatttaactttctgCGCAACGTCATTAATGTTTTCTTGTAATGACCACTTAAAAAGACATATGCGTATTCACACTGGAGAAAAACCATACCGTTGCAAGTATTGTGACCGCGCCTTCACGCAGAGCAACGATGTGGCGAAACATATGCGTATGCACGTCGGACAAAACATCtatcaatgcaCCGAGTGTAATATGAAATTCAGACTGATGAgggatttaaaaaaacattacccAATTCATTACATCAAGGGCGAAGAAACCCCAACCGTACCAATTGGGAAAGGAATGGTGGCTCCCGTTATAGTACTGAAACCTGCCGAGGAGTCCACCGCCGCAGTACCGGAAGAGCCTATAAGTCACGCAGACGGCCAAATAACAATCACTGTTAATAGTAATGGATATAGAGATGGTTTGGCCGGTGATATCATTATAAATGTGACGCCACAGAATAGTTAA
Protein Sequence: MGDLTITCRTCMKSSDNLVDLFGPLKIEDNYNTLLADILMFTTAIQVLRDDGLPRSICSECVNILEMFVIFRNNALKSEEQLKKLLLLQSTLKEELKDDATCVEPTDESIKICPTNPQSNELGDETKIKTEANLYVCDKCEKQYISHKRFLNHLATHGESSITKQIDVEVKSEPIFNDSLDDNVSESAILDIETDSRDEYKCNECNQIFYKERSLISHRRKHRNCNLKNDGNSRFECDYCGKEFSMKPLLKRHLKLHSIDRPFICPKCPKRYTRQDQLLEHMKRHNKVKTHICTYCNKGFFQLCSLKDHLRVHTKEAPYLCSECGKSFSSNSNLRQHMNRHTGIKPFACTFCPKAFTTKGQMMGHLTTHTGAHPHKCDECGASFTKLNSLKKHKFIHLEIKAFACDTCNKSLNKIMEGRGKRLVRLEQLSNNESHNQVEVPNIESTLSIASSSSILNPYDGDLTKHYVTKKFETSNVYDDKTQPRVSYNENLPGHGFSGTNDDYQYVPKSSSSSSSSGSSNSSSGSSSLESDHETPRPSTTKCGRKRITERVLRTVIECKHDDEGHNVMKEDGRGKHGKQIRLDEEIKQSQKNKYMFCMYCYAINMLPINSCGLYDVVARTCSIFNLTFCATSLMFSCNDHLKRHMRIHTGEKPYRCKYCDRAFTQSNDVAKHMRMHVGQNIYQCTECNMKFRLMRDLKKHYPIHYIKGEETPTVPIGKGMVAPVIVLKPAEESTAAVPEEPISHADGQITITVNSNGYRDGLAGDIIINVTPQNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -