Basic Information

Gene Symbol
RERE_1
Assembly
GCA_907164705.1
Location
CAJQZP010001427.1:5184507-5251968[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-08 1.9e-05 25.3 0.5 2 45 126 170 125 171 0.92

Sequence Information

Coding Sequence
ATGGCCCAGAATCAAGGGGAGGTTCAAGTGGGAACACCGAATCAACCCGTGAAAGATAAGGATATTTATGCTTGCTTGCCCGAAATTCGTGTGAGTGGTCCGCTAGGACCTGATGATCCCTGTCCTGGAGGCGAAGAATTACGTTGGCTGCCAGCGCAAGCAACAGATCGAGATCTTGTTATGTATTTACGAGCCGCACGTTCAATGGCAGCATTTGCAGGAATGTGTGATGGTGGCTCCCCAGATGATGGTTGTGTAGCTGCTAGTCGTGATGATACTACAATCAATGCACTAGATGTTCTTCATGACTCTGGTTACGATCCTGGGCGAGCGCTTCAAGCATTAGTTAAGTGCCCAGTCCCCAAAGGTATAGAGAAAAAGTGGTCTGAAGAGGAGACAAAAAGATTTGTCAAGGGTATTCGTCAGTTtggtaagaatttttttaaaattaaaaaagatttactACCCCATAAAGATACATCAGAATTAgttgaattttattatttgtggAAAAAGACTCCTGGTGCTAGCAGTAACCGACCTCATAGGAGGCGCAGACAAGCATCATTGAGACGTGTGCGTAATACTAGAAACTCTAGAGCAGGAACACCTAAGGAACAAACACCTGAAGCTACTCCGGCTGTGCCTGATACAAATGGCTCGAGACCCTCGCCTAATCCTAAAGAAGCTGGAGAAATGAGTTCAGTAACGGAGGATGAAAACTCTGAGGAAGATAGTGATTCAAGAGATGCCGGTGACTTAGCAAAAGTTGATACTAGTAGAAGCGGTGATAACCCAGAGGACTCACCAAGCAGAATGCGTACAAGAAATAAGTCAAAAGAACAAACAACACCAAATGGAAGAAAAGggcaagatgaaagtgataatgATTCAAAGTGTAAAAAGCCCAATAAACAATCTAATGTACAAAGTACAAATAATAATGTGGCTGAAAAAGTTTTATCATCGCCAgctaataaagataataaaaagaaagtgtcaaATGGTAAAGTTGATGTATCTAAGGTTAAGAAAAGACTACCAGATGATACAAAACCAGAAGGTATTATGGATGGTGATGtacaaatgaaaaagaaaaaggcTAGTGATCCACCTGAAAGTCCATCAGAAAGTCTGACAAATGACAGTTTCTCGGCCATGGATGAAACTGAGAATACTGAACCTGAACCAGAAGCTTGTGACTTTAGCTTCAATAAAAACGAAAAAGAAAACCCTGAACAAAATAAAGAACTGGAATCTGAACAACTTACTAAACCAATAGAACCTGCAAAGTCAGATTCCAATAATGAGCTTACAAATAAAATAGACAAAGAGCCTTTGCCTCCTGTCTTTAAAGTTGTATCAGAAAAAGATGATAGAAGTGTACTTGATTTGAAAACAGAGTCTAGTGGATCCAGGAATGTAGAAAACGCTGAACCTAGATCTCTTGCAATATTCCCGAAAACTGAACTCATTATACCTAAAGTTACTCCCATATCTACAGAAGTTTtagagaaaataaaaatcaaagagGAAATTGATACAGAAGAACAAACACTTAATTTACAGAAAGAAGATTTTCAGAAGGATCCTCTTTCCCATAATTTTACTGGACTTCCTTTAAATCAACCAAACAAACCTCTTAATTTGGAAAGCACAAACTTTTTTGTTAAAGACAGTCATATTTATAATCCCAAACTTAGCCACGGTATTAAGATTGAAGGAGtgccaaataatatttttaatcctgTGAACATTAAAGAAAATTCAATTATCAGAAATGCTAAAGACTTTGTAAGTGGGATGCCACCATTTTCATATCCTCCAAACATGAACTATCCTGGTGATCCTAATAAACACAATCCTCTTATTAATCCATTAAAGACTGTTATTAAGTTAGAGCCAAGAGATGAAACGAGTGATTTGAAAAATCAAAATACTCCCGAAATCTTTACAGCAACTATATCAGCAGCAAATAAGGTGGACTCGCCTAACACACCGAGGCTGGATAGCTTACAAAGGATTAGCCCATCTCCAACAAATGCAAGAGGATCTTCCCCATCTCATCTTGAACATGCAATTACCACAAGTACTGAGCCTATATCACCTGCTAATACTCAAGAGATTAAATCGCATGAGTCAGATATTGAAGACAAACAACCAACTGACTTAAAAACTCAACCAATACAAGCAAAACAAGATACTCAAAATAGTGGGTTGAGACCACCCATGTTCCCCACACCTGTGAGACCTGAAAATCTTGGCGTAAGATCAAGTgatgctcaaagtattcctgtATCAGGGCAAAGTATGCCTCCACCATCTCTGAGTCAACCATCTATAACTAGCCTCTTGCCTCCAGGTCCATTAATATCGGTGGGAAGCGGTTCTAATTTGGGACCCTATGGATTTATGCCTACGCCATTATATGGTCATCCAGGACATCCAGGTTTAGAAAAGCCTAGCTCTATACCACAAATAATGCAACAAGTACCTCCAAGTCATGGGCTTCAAGGAAATAATTTGATACCTCCACCATCTAATCAAAGTGATCCATCAATGCCTCAAGACTTAAAGATAAAACAAGAAGTACCCGACAATATGCCAGCTAATCTATCCACACAGAATGTAACAGATCCACTGCAGTCCCTTAAGGAAGTAAAAGTGCCAGGTTATCCAATTGGAAGTGCTATAGCTCAACATTTAACCTCAGAAAGAGATAGAGAATCAATATCAAGTGTTGAAAACAGCAGTAGACCCCCAAGCCAACCAACAAATGAAAACACAACCATGGCAAGCGCATTCCTTGGATCAAGAATAGAAAGTATTAAAAAGGAACCCGATTTTATACATCAACCTCATATTTCTCATATTCCTGTATCTTCAAATCAAGTGAGTGTGTCGGAGTCATCAAATGCAATGGCACCAGTGAAAAGTCCTCATACACCTACACCCATAAAAAGCCTGCCCTCCCACAATGGTACTCCCAGTCATGGCACACATCCATCAGCAACAACATCACCATTTTCTCGACATTTAACAAGTCCATCACAATCAAGACATATATCTGCATCTCCAGTTCAACCAAATACACCTGTTTCACATTCAGCACTTAATTTAATGAACCCTTCACCATTATCTATACCATCAACAATACCTGGCCCAGTAATGCATTCAGGTCAACAACCTGGGCCTCATCCACCGCATCCATTTGCATCCCCTCTTCACCACCCTCATCATCCCCTACTTCATCCATCCTCAATATTTCAACTGTCagctgcagcagctgctcacgcCATGCATCCATACTATCCTCATCCACATCCTGGTTATTCTATGCCTTACCCATATCCTTATGGACCATTGCCCCAACCTCATCCAATACCACCGATGCATCCCGCCTCAAGTACGCCAGGAAGGCATGATCCAGGAAAACCCTCTACAATAGAATCAACAACCATGCTAAGCGCTCATCACAGTACCAGTTCGTCTGTTACTACAAGGTCATTAAGAGAGATTTCTGAAAGTTCTGAAGACCCAAGAAATCCAAATGCAACCACAGAAAGGCATCAATTGCATGAAACAACAATGACCCATCATCATTCAACTAGTCACCATAGCGCTGTGCATACAAGTACTGAAAAACAACCGAATCATGCAGGAGGGGCCACAAATCATACTTTATCTATTTCTCATTCAACGTCAAGCAGTTCATCGCAGTCTatacaacataaaataaatacccaACAAAAATCCAATTCACATTCTGGATCGCCGCATCATCTATCTGCCAGTGTCTCGCAGACTACTAGTACATCATCCAGTGTTAATGTATCAAATAATCATACTCACCATCATTCACATCACCTCGCTCATCATCCCGAGAGATTATCGCCTGCAGATTCTATGCTATTACGTCACCACCCAAAAATGATGCCAGGAAACCCAAATCACCTTATGATTCAACCACCATCGATGGGTCATCCCATGGGTTTAGGCTTGCCACCAGGACCTGGGCCTAGTTCAATTGAGACTTTACGGTTGCACGCCCAAGCTGCAGCGGGATTGCAAGCATCGCATGCAAGATCTGGCTCACCTCATCAAATGGCTCATGGCCATCCCCATTTACGTGGCCCTCAGCGACCAATGTCAGATGAAAACCCTGAACTGAAACTTGAAACACAGTCACAACCCGAAGAAGATGAAATTCCAAGTCCAGCACACATTCCTCATGGACCAAGCCCTGAACCAAAAATAGAAGATACGGAATGTCATAGATCACAATCAGCCATATTTTTGAGACATTGGAACAGAGGCGATTACAATTCATGTACACGAACAGATTTAATATTTAAACCTGTGCCAGAATCAAAACTTGCACGGAAACGAGAAGAACGATTACGGAAGCAAGCTGAAAGAGATAGagaggaaagagaaaaaattgctCAACAAGCTCACAGAAAAATAGCAACACCTGAAAAACCAGATACTAAACCACCATCAAGAGGTGCTATTGAAACAATTACTTCTCCATATGATAGATTCCCTAGACCACCAGGCTATCCTGATACTCCTGCTCTACGACAACTATCAGAATATGCAAGACCACATGCAGGATTTAGTCCTGGAAATTTGCCTCGACATTGTATGGATCCAATGCTGCAGTACCAACTTAGTTCAATGTATGGAGCTGCTGGAGCCAGGGAACGGCTTGAGTTAGAGCACCTTGAACGGGAGAAACGCGACAGAGAAATAAGAGAACTGCGGGAACGTGAACTTAATGATAGATTGAAAGAAGAACTTTTGAAAAATAATGTTGGTCCTAGAGCTCTCGACCCACACTGGTTAGAAATGCACAGGAGGTATGGAATGCCGCCTCCTCCACCGCAGGGCGCTATTCCAGTTCAATTCGGGCTTTATCCTCCTGGACACGGGCCTGCATCACTTTCTCAACTTGAACGCGAGCGGCTCGAACGACTAGGCATCCCACCGTCAGCGGCAGGTGGGCCGCCGCCCAACGTCCCTGTGACGGGGGCGCCGCCACACCATCCACATCATCCGCATCCTGGGGTTGCGGCTGCTCAACTGGAGGCGGCTGAGAGGCTAGCACTCGCTGCAGATCCAATGGTGCGACTACAAATGGCTGGAATCAACCCAGAATACCACGCGCACACTcatgcgcacacacacgcgcattcACATACTCACCTCCATCTCCATCCTGGCCAACAGGCGGCGGCACAGGCACAACAGGATGCCCTGGGTCTTGGGCTTGGAGCCGGTGCGCCCTACCGGCCGCTGCCTCATCCGGACCTGCTGGGCAGGCCGTACGCTGAGCAGTTGGCGCAGCAAGCGGCGGCCCATGAGCAACTTCAAAGGCAGCTTCTTCTGGAGCGGGAACGAGGCTTTCTGCATCCAGCCCATCACGAAGACTTCCTGCGCCAGCAGCGAGAGCGCGAACTGAAGAGCACTATTGAACTACGATGCGAGGTGACACCGGCGCCATTCATTATGCGACCATACGCCGGCCTCTACAACCCGTTCTCACACGCGTGCTCCATTCTTTGCAACCACCCCGCCGATATCGAAGCCAAAGAGTTTGTCAAGCGTGCTAAAGATGCTTGGgCTTTAGAAGGAAAAACTCATAATTTTCAAGAGGACTTAAGTAAAATTCAAGATCAATGTGACAAGGAGAAAAGTAGAACCCCACATGACATCGTAACTGAGGACATGTTTAGAAGGTACACGGAGACAGATTCAAGACCACTCACACCGGCACCAACGCTTGCGAGCGGCAAGTCCAGAGGGTCGCGGAGGTGTCTGACGCCAGATCAACCACACCAGAGAACCACCATCGTTCTTGATCTGCGCCGAAGTCATAGCCAGgAAACATTGTACTACTACCACGGCCACGGCACATCAGAAATGACGACTGGCCACAGTGCCACCAACGAGCGTTCGACTCTACCATCCTTGAACCTGTCTGAAAGCGGACATCAACGGCTCAGGACGGGACAATGCGAGCAGCTGCCCCCGCTAGCGTCGCCATTGGTATTGGCTATAAGAAACTCACCTGCCAGAGAACCGCAAAGTGTGAGAACAGCTAGAAAGAAGAAGACAAAAGAATTTAAAACTTTGGCTAAAGAAAATTGTGCTGCAACAAAACACAAAGGTGCTAAGCATGAAATGTTATCAAAACTGTCGTCGGGAGTACGACAATCACCTTGCGATTGTAATTCGATTCATTTGTCAAGAATAGTAATAGATTACGgatcaaataaaagaaaaagagtAGCTTCAACCGTGACTATGCCTGCATCAAATCCAAACAAGAAAATGAAACTCCCGAACATGCAGATAAAAAGAAAAGTGATTAATAAGCAAAAAGGTGTTACTTTTGAGAAAGAAGAGTTCTTTTATAACCTTGAGAACCAActaaaagctttaaatttaagcaagacagtcaaaaataaaaacaaaagcgaAGCGCCGGCATCTCAGCGTTCGAAGGACGATAAGGACAGCAATGATACAAATTTAGCCGATCAAGGAAATGCAGAGGATATTGaaGGCGGAGAAATTCGACGAAGAGGTAAACGGCGTCGTAAAGTCCGTGGTGGTGGCAGCGATCGATTAACTTCGGCTGGTCTCGCCGCACAGGCACAACAGGATCCTGAAACTcaaatcGCGGGCATAGGCACGGACTCTCACAATGCCAGTTCTCGTGGATCTATAGCTGTAGCGGAAGAAGCACCACTACCGCCGATAATGAAGCCAGTTGCCACCTCCATTACGGATTCCTTCATTGATGatgatattttgaaatatttacataGAGAAGTCGATGAAGAGGCTATTGAAACTGAGTTTGATACCAAgGATATTGAAGAAGGATTAATCCTAATGATGGGCGGAACGTTAAGTATGGACCAGGCGACTCAATTCAAATCCTTAATGGAATGGGACTCCTATAAGGAGGAGGATAACATTACCGACGATATCAAGTTGGCACTACTTGATAAAGGATATAAGGATCATTTTCCTTCAGCGGACGGTGATACAGGAGATAGTGCTTTGAATACACTAAAATATCGCACCTGGTGTGGCTTGTGTGCAATTTGTGAGCGTATGTATGGAAGATTCCCCACCAGAGAAAAGGATCCACCTGATGGGatGGAGTTAACCGACTTCACAATGATAGAAACAAAGTTGGCTGTGTTAAGAGTGCGGAGTAGTCTGGCGgaaatattaaacattataaGAATAcgttaa
Protein Sequence
MAQNQGEVQVGTPNQPVKDKDIYACLPEIRVSGPLGPDDPCPGGEELRWLPAQATDRDLVMYLRAARSMAAFAGMCDGGSPDDGCVAASRDDTTINALDVLHDSGYDPGRALQALVKCPVPKGIEKKWSEEETKRFVKGIRQFGKNFFKIKKDLLPHKDTSELVEFYYLWKKTPGASSNRPHRRRRQASLRRVRNTRNSRAGTPKEQTPEATPAVPDTNGSRPSPNPKEAGEMSSVTEDENSEEDSDSRDAGDLAKVDTSRSGDNPEDSPSRMRTRNKSKEQTTPNGRKGQDESDNDSKCKKPNKQSNVQSTNNNVAEKVLSSPANKDNKKKVSNGKVDVSKVKKRLPDDTKPEGIMDGDVQMKKKKASDPPESPSESLTNDSFSAMDETENTEPEPEACDFSFNKNEKENPEQNKELESEQLTKPIEPAKSDSNNELTNKIDKEPLPPVFKVVSEKDDRSVLDLKTESSGSRNVENAEPRSLAIFPKTELIIPKVTPISTEVLEKIKIKEEIDTEEQTLNLQKEDFQKDPLSHNFTGLPLNQPNKPLNLESTNFFVKDSHIYNPKLSHGIKIEGVPNNIFNPVNIKENSIIRNAKDFVSGMPPFSYPPNMNYPGDPNKHNPLINPLKTVIKLEPRDETSDLKNQNTPEIFTATISAANKVDSPNTPRLDSLQRISPSPTNARGSSPSHLEHAITTSTEPISPANTQEIKSHESDIEDKQPTDLKTQPIQAKQDTQNSGLRPPMFPTPVRPENLGVRSSDAQSIPVSGQSMPPPSLSQPSITSLLPPGPLISVGSGSNLGPYGFMPTPLYGHPGHPGLEKPSSIPQIMQQVPPSHGLQGNNLIPPPSNQSDPSMPQDLKIKQEVPDNMPANLSTQNVTDPLQSLKEVKVPGYPIGSAIAQHLTSERDRESISSVENSSRPPSQPTNENTTMASAFLGSRIESIKKEPDFIHQPHISHIPVSSNQVSVSESSNAMAPVKSPHTPTPIKSLPSHNGTPSHGTHPSATTSPFSRHLTSPSQSRHISASPVQPNTPVSHSALNLMNPSPLSIPSTIPGPVMHSGQQPGPHPPHPFASPLHHPHHPLLHPSSIFQLSAAAAAHAMHPYYPHPHPGYSMPYPYPYGPLPQPHPIPPMHPASSTPGRHDPGKPSTIESTTMLSAHHSTSSSVTTRSLREISESSEDPRNPNATTERHQLHETTMTHHHSTSHHSAVHTSTEKQPNHAGGATNHTLSISHSTSSSSSQSIQHKINTQQKSNSHSGSPHHLSASVSQTTSTSSSVNVSNNHTHHHSHHLAHHPERLSPADSMLLRHHPKMMPGNPNHLMIQPPSMGHPMGLGLPPGPGPSSIETLRLHAQAAAGLQASHARSGSPHQMAHGHPHLRGPQRPMSDENPELKLETQSQPEEDEIPSPAHIPHGPSPEPKIEDTECHRSQSAIFLRHWNRGDYNSCTRTDLIFKPVPESKLARKREERLRKQAERDREEREKIAQQAHRKIATPEKPDTKPPSRGAIETITSPYDRFPRPPGYPDTPALRQLSEYARPHAGFSPGNLPRHCMDPMLQYQLSSMYGAAGARERLELEHLEREKRDREIRELRERELNDRLKEELLKNNVGPRALDPHWLEMHRRYGMPPPPPQGAIPVQFGLYPPGHGPASLSQLERERLERLGIPPSAAGGPPPNVPVTGAPPHHPHHPHPGVAAAQLEAAERLALAADPMVRLQMAGINPEYHAHTHAHTHAHSHTHLHLHPGQQAAAQAQQDALGLGLGAGAPYRPLPHPDLLGRPYAEQLAQQAAAHEQLQRQLLLERERGFLHPAHHEDFLRQQRERELKSTIELRCEVTPAPFIMRPYAGLYNPFSHACSILCNHPADIEAKEFVKRAKDAWALEGKTHNFQEDLSKIQDQCDKEKSRTPHDIVTEDMFRRYTETDSRPLTPAPTLASGKSRGSRRCLTPDQPHQRTTIVLDLRRSHSQETLYYYHGHGTSEMTTGHSATNERSTLPSLNLSESGHQRLRTGQCEQLPPLASPLVLAIRNSPAREPQSVRTARKKKTKEFKTLAKENCAATKHKGAKHEMLSKLSSGVRQSPCDCNSIHLSRIVIDYGSNKRKRVASTVTMPASNPNKKMKLPNMQIKRKVINKQKGVTFEKEEFFYNLENQLKALNLSKTVKNKNKSEAPASQRSKDDKDSNDTNLADQGNAEDIEGGEIRRRGKRRRKVRGGGSDRLTSAGLAAQAQQDPETQIAGIGTDSHNASSRGSIAVAEEAPLPPIMKPVATSITDSFIDDDILKYLHREVDEEAIETEFDTKDIEEGLILMMGGTLSMDQATQFKSLMEWDSYKEEDNITDDIKLALLDKGYKDHFPSADGDTGDSALNTLKYRTWCGLCAICERMYGRFPTREKDPPDGMELTDFTMIETKLAVLRVRSSLAEILNIIRIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-