Papo007062.1
Basic Information
- Insect
- Parnassius apollo
- Gene Symbol
- -
- Assembly
- GCA_907164705.1
- Location
- CAJQZP010000478.1:6930028-6930588[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-07 2.3e-05 24.6 0.0 1 36 8 43 8 49 0.88
Sequence Information
- Coding Sequence
- ATGGCACCAAAGAAAAACTACACGCCTCATCAAATGTGCCTTGCAATGGAAGCTGTTAGAAAAGGGGACAGTTATTCAGCTGCAGCTGAGAAATATGGTGTACCGAGAATGACCTTAAGGAATAAAGTAACGGGAAAGAGTCCTGCTGTCTGTCATATGGGTCCTCCTACACTACTTTCTATGAATGAGGAAGCCATATTAAAAGAATGGTTGTTTGCAATGGCAGAACGATATTGCCCGATAGGAAAGGAACAGCTGTTAGATTCtgttcaactaattataaaatcTGCTAATAGAAAAAATCCATTTACGAATGACAGACCAGGGAGGAAATGGttcgatttatttttaaaaagacatCCAGAAATATCTGAGAGAGTTTCACAAAACTTAACTACATCAAGAGAATCTGTAAAAGAAGAACATATAGTCAAATGGTTTGCAGACGTAGAGAAGTATTTAGAAGAAAATAATCTTCCAAAAGTTTTGAAGGATCCAACGCGGATATTTAATACCGACGAAAGCGCGTTTTTCTTAAATCCCAAACTTAAACGTGTTTAG
- Protein Sequence
- MAPKKNYTPHQMCLAMEAVRKGDSYSAAAEKYGVPRMTLRNKVTGKSPAVCHMGPPTLLSMNEEAILKEWLFAMAERYCPIGKEQLLDSVQLIIKSANRKNPFTNDRPGRKWFDLFLKRHPEISERVSQNLTTSRESVKEEHIVKWFADVEKYLEENNLPKVLKDPTRIFNTDESAFFLNPKLKRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158789;
- 90% Identity
- iTF_01153890; iTF_00035596; iTF_01158871; iTF_01158875;
- 80% Identity
- -