Basic Information

Insect: Parnassius apollo
Gene Symbol: -
Assembly: GCA_907164705.1
Location: CAJQZP010001624.1:1145115-1172179[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 0.44 79 3.7 0.0 9 34 493 518 488 524 0.90

2 2 2.3e-08 4.1e-06 27.0 0.0 1 40 560 599 560 604 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	0.44	79	3.7	0.0	9	34	493	518	488	524	0.90
2	2	2.3e-08	4.1e-06	27.0	0.0	1	40	560	599	560	604	0.85

Sequence Information

Coding Sequence: aTGAAGACACTGGAATcagaaataaaaagtatattcTCACATGAAAAACTGACATTGTTTAATAAACTGTATTATAAGCAGAGAGCTGATGTTGAGAATTTCCTACCGAATGAGGATCAATCATTGTATATTATCTGGGCTAAGACTAAGAATTTATTGGGAGGCAATGAACAACAAAACATACTTGAaccaaacacacaaacacaagcCACTCAAGATCAGACAACACAGGGACAGACCAGGCTAGAACAGTACATGCAAAGAGAGAATACACAAGTACCGACCATACAAAGACTGAGCACACAAGGACAGATGACGCCAGAACAGAATACACATGAACTGAATGCACAAAGAGAGCATAAAGAGGAACAGAGTGTGGAAGTACAGGTCACAACAGAACAGAATATACAAGGACTAAATGAAATTGGACAGAATATAAAAGTGAACACAGAAACACAGAATGCAAGAGAACAGATCATGCCAGACCAAAATACACAAGCACCAAATTTTAATGTACAAGGAAAGAACATAGAAGAACAGAATGTGCAAGAACAGATCACAATAGAACAGAATACGCGAACACAGAATGGACAAGGACAGAAAAAAGAAATAATCGATCAAGGACAAGGAAACAATGAGCAATCTTTTTCAACGGTATATGCTACACCACATAAATCTGTTATAACGTTTTCGCCAGTGTCATATCCTTCAACCTCTGCAACATTTCCAAAAGACGTGGTAATCCCGTCACCTTTTAAACGTGTCTTATTTTGGCCTGAACCTGAAACTAAGAAGCGACGTACCAAGGAACGTGTACCGTCAGCTATAACTAACAATGGTGATATGGAAGTTAAATATGCTGCAAGCAGTGACTCCGAGTCCGAGTATGCTGAAAGTGGGAAATCAGACTCTGAAAATGAACCTTTAAGTAAAATAGTTTCTAACAAGAAAACTTTGTGTACgaagaaaattaaagatgttACCAATGGCTCCTACGTCATTGTAAAATATGAGGGAGAATATTTTCCGGGTAGTATAGAAAAAACAGAAGGAGATTTATACGAAATAAGTACAATGTGGCAGCAACCAGAGGAAAATATGGGGTATATGGATATGATATGCACCTCTTGCATCTCTCGGTTACGCGATGCACATGCCTTCAAAAGAGAAGTTTTAGTGAGTGAAGAGGTGCTGCGTGAAAAACAAGATGAATtatttCTTAATACTACAGTGAACGCGGAGAAATATTTagaagaggaagaagaagaaaCCGAGTTTAAAGAAGTAGAATACTTAGATATCACAGACAGTTTAAAGAAAGATGAATTGTATGAAGAATCTTTATCAAATGAACAATTGCTGAGTTCAGATACTTCCCTGCTAGTAGAACATAAAAGAAAGTTGTCAAAAAAGCTCCCAAAGAAAGAGAGAAACAAAACATACAAGCAGTATATTGACAAGGAATTACAAATGGATGTCGATGCAGTCCAGAACAATGAAATGTCACATACAGAAGAGACTGAGTTGTTTAATGTGCCCACGAAAACTATCTCTGCTAAGATCCACAATCTTATAGACAAAGAAGAGGAACAATCGCAGAGTGCAGAAGAAAATCGTAAAAGAAAATGGCCGAAGAAACTACCAAGGAAAGACAGAAACAAAACATACAAGCAGTATACTGAAAAGGCAATGAGAATGGCCATTGATGCTGTCCAGAATAAAGGGTTGTCATGTCATGAAGCGTCAGAGATGTTTAAGGTGCCAAGGAACACTCTTGCATTAAGAGTTCAGAATACTATTGCCAAAAAAGAGGAACCAGATGATGATGACGCCTCAAAAGTAACAGACCAAGAAAAACACTACAAACTCGTGGAGGAAATTAAATCTATACTCACCTACACAAATGCTATACCATACAAAACGAAATTGTCAAAGTACTACTGTGCATACTGCTCTACCGATGGACCTGTTTTTGATGATCCCGATGATTTGAGGACTCACACTAAAACGAAGCATATAGATGATCGGACCAAAGGCATAGATCTGCTAATGAGACCACACTGTCAAAATGAAGTGTTAAAAGTTGATATACATAGTCTCCATTGTACAGTTTGCTGTACAATCCTGCCAACTTGGAACGACATGTTTCGACACCTTGAAGACGTGCATGAGGTTGTTCTAGACGAGGCCTATAGCAGAGTAATACCTTATATCCTAGCAAGGGAGTTGAAATGTGCTTTATGTGAAGATGCCTTTCCGAATTACCAAACGCTGGACGGACATATGAACGCCCATTACAGCAGTTACATTTGCTCCGAATGCGGCGATACTTTCTTATCAGCGAGCCGATTTAATAAACATTTGGAAGTGCACAATACTGGGACATTCACTTGCGAGGTTTGCGGTAAAGTGTACAATTTGAAGAAGTACTTGAGGAAGCACTTTGACTTGGTACATGGTCAGAAGAACCAATACAAATGCTCATACTGTCCGGAAAGATTCTTCAAACCATTCCAGAGACATCAGCATGTACTTGACAAGCACAAAGAGACGGTCAAGATAAAGACTTGTGAGATCTGCGGAAAGTCTTTCGACTTTATGCCCTACTACGGGGCTCACATGAGACGAAGGCATGGGCAAaagaataaatacaaataa
Protein Sequence: MKTLESEIKSIFSHEKLTLFNKLYYKQRADVENFLPNEDQSLYIIWAKTKNLLGGNEQQNILEPNTQTQATQDQTTQGQTRLEQYMQRENTQVPTIQRLSTQGQMTPEQNTHELNAQREHKEEQSVEVQVTTEQNIQGLNEIGQNIKVNTETQNAREQIMPDQNTQAPNFNVQGKNIEEQNVQEQITIEQNTRTQNGQGQKKEIIDQGQGNNEQSFSTVYATPHKSVITFSPVSYPSTSATFPKDVVIPSPFKRVLFWPEPETKKRRTKERVPSAITNNGDMEVKYAASSDSESEYAESGKSDSENEPLSKIVSNKKTLCTKKIKDVTNGSYVIVKYEGEYFPGSIEKTEGDLYEISTMWQQPEENMGYMDMICTSCISRLRDAHAFKREVLVSEEVLREKQDELFLNTTVNAEKYLEEEEEETEFKEVEYLDITDSLKKDELYEESLSNEQLLSSDTSLLVEHKRKLSKKLPKKERNKTYKQYIDKELQMDVDAVQNNEMSHTEETELFNVPTKTISAKIHNLIDKEEEQSQSAEENRKRKWPKKLPRKDRNKTYKQYTEKAMRMAIDAVQNKGLSCHEASEMFKVPRNTLALRVQNTIAKKEEPDDDDASKVTDQEKHYKLVEEIKSILTYTNAIPYKTKLSKYYCAYCSTDGPVFDDPDDLRTHTKTKHIDDRTKGIDLLMRPHCQNEVLKVDIHSLHCTVCCTILPTWNDMFRHLEDVHEVVLDEAYSRVIPYILARELKCALCEDAFPNYQTLDGHMNAHYSSYICSECGDTFLSASRFNKHLEVHNTGTFTCEVCGKVYNLKKYLRKHFDLVHGQKNQYKCSYCPERFFKPFQRHQHVLDKHKETVKIKTCEICGKSFDFMPYYGAHMRRRHGQKNKYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01154647;
90% Identity: iTF_01154647;
80% Identity: iTF_01154647;