Papo024585.1
Basic Information
- Insect
- Parnassius apollo
- Gene Symbol
- -
- Assembly
- GCA_907164705.1
- Location
- CAJQZP010001479.1:1395821-1399984[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-10 4.9e-08 33.2 0.0 1 39 70 108 70 112 0.90
Sequence Information
- Coding Sequence
- ATGCATCTTCTAGAAGAAAAACTGGGAAATGGAGATGAAGTGTATatggaaaattattataatagttatataCTGGCAAAGAAGCTGCTCGAGAAAAATACATACTGTATCGGTACTTTACGTAAAGACTTACGAGACAATCCTAAAGAAGTGACACAAAAGATGGTACggcattatgtaaaaaaaaagattggAGAACCTAATTACACGGAAGAAAAACTAGAGAGAGCTCTTAGTGAGATAAGAGCTCATACTATGACAGTTAACAGAGCTTCCAAAGTATATAAAATACCATTTTCAACGCTATACTGCCGTTATAAGGGTACGAGAGGATTAATAAAAAATTCGAAAGGCCGGACAACTGTTCTCCCTGAAAATGTAGAAAACACTCTAGCTACCTCAGTAAAAACGTTGGCTAAGTGGGGCTTCGGCCTAAGCAGAAAAGAGATCATGGAATTGGTAGGacaatatgttaaaataaacaatttaaaaacacCTTTCAAAGATGGCGTTCCAGGTGAGGACTGGTTCCTAGGATTTAAAAGACGCCATCTTTTATCGATCCGGAAGCCTGAGCCTATGGAATACTCCAGAAAAAAAGCTGTAACTGACCCCTTCATAATTTTTGGATATTTCGATCTTCTTGAAAGAACTCTCACTGACTTAAAGTTAAAAGATAAGCCCCAAAACATATGGAACCTTGACGAAAGTAGCTTAAGTATTGACCCAGCAAGAACAAAAGTTGTCGGAGAAAAAGGCCGAAGTGTGTCTAGAGTAATCAGCACTACAGGGAAAGAAAACACAACTTTTGTTTTAGCCGCCAATGCCGTTGGTCATAGGATTccaccattaattatctttaaaggTAAAAATATGTGGGACCAATGGCGAGCACCTACAGGCAAAGAATTTCCAGGGACGGCTTACGCCGCGAGCCCGAATGGTTGGATGGAAACAGAGATTTTCACTAACTATTTCAAGAAGACCCTTATTCCAGCTCTTGGCAGTGAACGACCTATGTTAGTGCTATATGACGGTCATGCCACACATTTTTCTGTTGATCTTGTGGAAACAGCGATGGCCAATGACATAACTATTCTTAAAATTCCAGCGCACACCAGCCATCGTCTGCAGCCATTGGATGTTTCTGTCTTTAAATCCTTTAAAGAAAATTGGGATCAAACAGTAACAAAATGGCAACGGCAGCATATTGGGCAGAGATTGCCTAAATCTTTATTCTCTCAATATTTAGGGGAAACTTGGATTAAAGTTTCCGAAAGTTGTATAGCCAATGGGTTTAGCAAGGCTGGAATTTATCCTTTTAACCCCAACATAATTCCTAGAGATCATTTTTCCAAAGAATCCCTGGAACGCTGGGAAATCTCGCAAGTAATGGCCAATCCTATGCCATCAGCATGTAGCCTTCCTTCGATCTCGTCTTCTCGAGAGAATTTCTCGGAAGAAGCCCTGGAAAACAGAGATAATTTGCAAGTTTCTTCGATTTCATCGATGACTGATGAAAGCCAACGAAAATCTGACAAAAGCAACTTAGAACACACTTCAATAGAAGGCATAATTCTATCTACTATCCATCAAAAACGTTTACCACCGAAGGAAAGGAAACGGAAAGTTGCATCAGGCGCTCAGGTCATTACTTCTCATGAAATTCTTGAAGTTCTACTAAAAGATGCAGAAGAGAAGAAAACTaagatcaaaaaagccaaaagaaagacaaataaagaaaagaaaaataaaaaaagagcagACAGCGATAGTACAGATTTGGAATCGGAAATTTCTTATGCTGAGTCGGGAGAAAGTTATTTTCCTGAATACTTGCAAGGAAATGATCCGCTGTGTTCTAGAGAAGATGATATATTACCTTTTGCGGGGGGAAGAACTACAATTACTAGAGCAAAAAGATCCGATGGATATTGA
- Protein Sequence
- MHLLEEKLGNGDEVYMENYYNSYILAKKLLEKNTYCIGTLRKDLRDNPKEVTQKMVRHYVKKKIGEPNYTEEKLERALSEIRAHTMTVNRASKVYKIPFSTLYCRYKGTRGLIKNSKGRTTVLPENVENTLATSVKTLAKWGFGLSRKEIMELVGQYVKINNLKTPFKDGVPGEDWFLGFKRRHLLSIRKPEPMEYSRKKAVTDPFIIFGYFDLLERTLTDLKLKDKPQNIWNLDESSLSIDPARTKVVGEKGRSVSRVISTTGKENTTFVLAANAVGHRIPPLIIFKGKNMWDQWRAPTGKEFPGTAYAASPNGWMETEIFTNYFKKTLIPALGSERPMLVLYDGHATHFSVDLVETAMANDITILKIPAHTSHRLQPLDVSVFKSFKENWDQTVTKWQRQHIGQRLPKSLFSQYLGETWIKVSESCIANGFSKAGIYPFNPNIIPRDHFSKESLERWEISQVMANPMPSACSLPSISSSRENFSEEALENRDNLQVSSISSMTDESQRKSDKSNLEHTSIEGIILSTIHQKRLPPKERKRKVASGAQVITSHEILEVLLKDAEEKKTKIKKAKRKTNKEKKNKKRADSDSTDLESEISYAESGESYFPEYLQGNDPLCSREDDILPFAGGRTTITRAKRSDGY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01156249;
- 90% Identity
- iTF_01158715; iTF_01158716;
- 80% Identity
- -