Papo003152.1
Basic Information
- Insect
- Parnassius apollo
- Gene Symbol
- POGZ
- Assembly
- GCA_907164705.1
- Location
- CAJQZP010000209.1:3789086-3790936[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-11 9.9e-09 35.4 0.0 4 38 28 62 25 69 0.86
Sequence Information
- Coding Sequence
- ATGAGCGAGAATTTAGGACTCAGttcaaaaatAATCGAATCTACTAAAAAGAAATACGCAAGATTCCGTTATACTCAACAACAGTTAGAGGAGGCTCTTACCCGTATAACAAATAACGATTTGTCTATTAATAAAGCCAGCAAAATATACGACATACCCAAATCAAcgttaagtaataaattaaataataaagtaccaTGGCAACGAAAAATGGGTCCATTAACACAACTAACTTTCGACGAAGAAAACAAGCTAGCAGACTGGATTTTAACAAAAGCTAAACTTGGGTTTCCAATGCACCCGGAAGAAGTTTATGATACTGTGGAAATATTCTTGAAACAAAATGAGAGGgagaataaatttacaaaaggCCGACCGGGGAAAAAATGGCTTACTTTGTTTTTGCGAAGACATCCCGAAGTAACTAAAAGAAACGCTGAAATAATATCAAAAGCTAGAGCAGCGGTTACAGAAGAGGCCATCAGAAATTGGTTTACTGAATTGAACAAGTTTTTAGAGGAAGAAAATGCCTTAGACATTAAAGATGACCCGACTCGTATTTTCAATTCAGATGAAACTGGCGTCATGACTTGTCTTAAAACGGGGCTGATTTTGGGgcccaaaaattataaaaatacatacgaaATCGCAAGTGGGAAAGAAAAAGAATCAATCACAGTCCTATGTACATTCTCTGCTGATGGTACTGATGTACCACCGTTTGTTTTGTATCCATATAAAAGAATGCCACCAGCCGTAATTCAAAATTTCCCAGATACTTGGTATATTGGTCGTTCCGACAGCGGGTGGATGGTATCAGTTGTATTTTTTACCtacattaagttattttatgAATGGTTGGTAAAAAATGAAATCCGGTTGCCTGTATTGCTATTTCTGGATGGCCACAAGTCCCATATCAATCGTGACATGTTTGATTTCTGTCGTGAAAAAGGAATAATGATTTTCTGTTTATATCCCAACTCAACTCATATTTTGCAGCCCTGTGATGTAGGAATATTTGGACCGTTGAAGAAAAATTGGAAAAGGGTAGTGAGAAAGCATAAACAGGCATCCACTGTacctataacaaaacaaaattttgctGCGTTGTTTAAAATAGCTTACGACAGAAGCATTAAGCCAACTACGATAAAAAattcatttagagtttgtggtttATATCCAATGTCTCCAGATGCAGTTGACTACTCACGCTGCATAAGTAATAGAAGGCAAGAAATTGCGCAACAAAACCAAAAAGGCACCACAACCTCTAGTCTTCATGACCAAAAAAGATGA
- Protein Sequence
- MSENLGLSSKIIESTKKKYARFRYTQQQLEEALTRITNNDLSINKASKIYDIPKSTLSNKLNNKVPWQRKMGPLTQLTFDEENKLADWILTKAKLGFPMHPEEVYDTVEIFLKQNERENKFTKGRPGKKWLTLFLRRHPEVTKRNAEIISKARAAVTEEAIRNWFTELNKFLEEENALDIKDDPTRIFNSDETGVMTCLKTGLILGPKNYKNTYEIASGKEKESITVLCTFSADGTDVPPFVLYPYKRMPPAVIQNFPDTWYIGRSDSGWMVSVVFFTYIKLFYEWLVKNEIRLPVLLFLDGHKSHINRDMFDFCREKGIMIFCLYPNSTHILQPCDVGIFGPLKKNWKRVVRKHKQASTVPITKQNFAALFKIAYDRSIKPTTIKNSFRVCGLYPMSPDAVDYSRCISNRRQEIAQQNQKGTTTSSLHDQKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154969;
- 90% Identity
- iTF_01153806; iTF_01154969;
- 80% Identity
- -