Papo014181.1
Basic Information
- Insect
- Parnassius apollo
- Gene Symbol
- jarid2b
- Assembly
- GCA_907164705.1
- Location
- CAJQZP010000963.1:645097-710771[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-20 1e-16 61.7 0.0 6 89 1002 1082 998 1082 0.93
Sequence Information
- Coding Sequence
- ATGTCTACTACGACAAGAAAGGTGCAAGCCCAGCGGAAGTTCGCGCAGGGCGCTTACATACCacaaaaaaatactaacaatgtcaGTAATACAACTGCTGAACGTAAAACGGACTTAATATCTCCAAAGGAAACAAATAACAACTTTTTTCATAATAGCAGTTCGGCTAAAAGCCTTCTCGACATTGTCTGCTTTCAAAaTGTCCATGTTCATAAGCAACCTATTGTACTCCTAGAAAGATTACACGAAAGCCAATCAGTATTTGCACCAGGAGCTACAAATCGAGTGACACGTGTGCAAAACCATCGAAATATGTTATCAAACGAAGCGGTTTCTCAAAAATCAAAACCGACAGCAAAAAAACATTGCATGCTATTAAGGTCAAGGACTAATCAAAGACCACAAAAAagagtaaatataaaagaaattaatttggCACCGAGGAGAATAATTACGAGAAACATCAGAAAATTCCTGTCAAGTCTTAATAGATCTGACTCTAGTGACTTCAATACTGATGATGATAAGCCATTAGCCTACTTTACCAGAACTGTTAAGGCAAGGAAAATCAAGAGGAATATAAAAACAACCACAGAGTGTAAAATTCCACGGAGAAATGCAATAGATGAACCTGTTGCAATGAGTGTCGATAAGGAtgtacaaacatacaaaaatgcTTCATTGGCACCCAAGCTGCCGGATTCATCGCTTCCTCGGGATGAACCTGTTGCAATGAGTGTCGATAAGGATGTACAAACACACAAAAATGCTTCATTGGTACCCAAGCTGCCGGATTCATCGCTTCCTCGGGATTCCCGACATGCTATGCAACCTGACGAAATGTTATATATACCAGTGAATTCTCCATCTATTCCACAAGTGAGTGTTGCAGTGAGTGTCGATAAAGTTGAAGTATCATCCGAGGCCTCCTTTGGATCGCAGGCTCTGGATGCACCGCTTCTTTGGGATGAACCTGTTGCAATGAGTGTCGATAAGGTTGATAAGGTTGTACAATGGTCCCCAGTCCCCTCTTTGGGATTACTGGATTCACCGCTTCCTTGGGATGAAACTATTGCACAGAGTGTGGATGAACCCGTACCATCGATCGCAACCTCTTTGGGATCGCAACGAGACGAGTTACCGCTTCCTCGGAATGACCCTATTGCACGGAGTGATGATGAACCCAGTCCAGTGATGAGTCCAGTACAATCGATCGTAATCTCTTTGGGATCGCAACAAGAGGAGTCACCGCTACCTCGGGCCAATGAAGAGGTACCAACTGTTCAAGGCGGCACCAGAGTTATTGAATTTGTAGAAGACACTATAGACTGGGCCAGTACTGATGGAgaacaaaatattgaaaaaactgTGCCAGCAGGGTGTAGTATTAATGAACTTAATGCATGGATTCAAGAAACTATAAAgcaaaaaaaacatgtaaatcgATTTAAAATTCCTCATCCTCCAAGGCCGAAACAATCATCACGGCTTCAAACAGTTGCAGGCCGACAAATTTTCACCAATAACTTCGACATGCCTAGTACATCCACTGTTAGAGCTTTTTCGTGTCCATCTAAGCGTTATACCACCTCTAGAGAAGTATTGCAGGCTCCAAAGGAAGAATTAGATAAACGTTGCATGAAATGCAAATATTGTGATTTTGTGAACAGAGTTTTTGAAAGAAGTAGCGAACGCAAAACACCCTCAAGCAGTGACAATTCTCTTTCTACACAAAATGAAGGATTCAGTTCTGACAGCAACACAAGCTCAGTTCAATGGAATACATCGTATAGTCACAAACGTAAAAGGCGTTGCAGACAAGCGTTTAGGAAACAAAGTGTGAACACAGGCAATATGGGAGGTGAACGTATGTCCTCAGAACTTCCACCTTCATCTGTACTTCCCCTACCTCGTCCACGATCAAACAATCGACCTCAACCTCCTCAAccaattaaaagtttttattcgAAAGATagcaataatatttttgaattcaaGTTGTCATGGCTATcgcataaaaaaaaatttattttgagTGCTGACCCGATTCCTAGTCCTTCAGATATAGTAATGACGGAGTTAAATTCAGCGACAGATTCGAACATTAAGAATTCTGTGCTTGGACATTTGAATAATATACGAAAATCAGTAATTAATAACGACGACGGCGCAATTCCGAGTACTTCAAGAGGACCTGATCCTGAACCAGTTGTTACAATGCCTGTCAAGGAGAATTCAAACAATGTTGGTACTAGAAATAGAGGAGGCTGTCAAGCACATTTGAATAGTCTACGAAAATCAGTAATTAATAACGACGACGGCGCAATTCCGAGTACTTCAAGAGGACCTGATCCTGAACCAGTTGTTACAATGCCTGTCGAGGAGAATTCAAACAATGTTGGTACTAGAAATAGAGGAGGCTGTCAAGCACATTTGAATAGTCTACGAAAATCAGTAATTAATAACGACGACGGAGCAATTCCGAGTACTTCAAGAGGACCTGATCCTGAACCAGTTGTTACAATGCCTGTCAAGGAGAATTCAAACAATGTTGGTACTAGAAATAGAGGAGGCTGTCAAGCACATATGAATAGTCTACGAAAATCAGTAATTAATAACGACGACGGCGCAATTCCGAGTACTTCAAGAGGACCTGACCCTGAACCAGTTGTTACAATGCCTGTCAAGGAGAATTCAAACAATGTTGGTACTAGAAATAGAGGAGGCTGTCAAGCCGAAAAACTAAAAGCAGCATTTCCCCGTCATAATAGCAAAGCTGAACTAGTCGACGCACCAGTTTTTTACCCAACTGAGGATCAGTTTctgGATCCGATTGCTTACTTTAATGAAATCATGCCGACCGCAGCCAAATTTGGGATATGTAAGATTGTAGCACCAGGGACATTCAAGCCGAAGTGTGTTTTCGACGAAGAAATCAAATTTGGTGTGACTAACCAATATATTTCGCGTTTGTATACTCGTTGGGGTCCAGCTTCCAGAGAAATGAGTGCTATAAAAGCACACTTAGCTTCGCAAAGTGTAGTATTCACAAGACCACCGCTGctCAACGGTATCGAAGTGAATCTCCCTAAACTTTATGAACTCGTGCAACGGTGCGGTGGTCTCAAGAAAGTTATAGAAAAGAAACGTTGGAGTCGTGTAGCCGAAGAAATGAAACTTACCAAATCtcctaatattgaaaaaaaaattgatcaaatttatgtTAAATACATATTACCTTATGATACGATGTCTAACAAAGAACGTCTAGAAATTATGAATAACGTAGAAGTTAActggaataagaaaaataaaaggaTGCTTGATAGAGCATTAAATCCCTTGCACAGACAAAAACGTCTTCTGGGTGAATCAGAATCGTctgaagaagatgatgatgacgatttaaATATTACTCAAGCTTTAATCGAAGCCGAAGATTGCATAGTAACCGGACGTTATATGAATTTGGCAACGTTTAAAAAGGTAGCCAATAAAGTAATAGCGACGCATTTTTCTACACCACACCCTGCTACGCAGGATGTAGAAAGTGCATATTGGAAATTAGTAATTATGGCAAAAGAGCACGTATGTGTTAATGCCGCGTCAATAGATACTGGAGAAGAGGGATATGGATTTACAAAGAATCAACGAGATATTATTGGGAGACACCCGTGGAATCTGAAGgTGTTAAGTTGTAATCCTGGCAATATTCTGCGATATTTGGGTTCCAAATTGGGTGTCACTGTACCGACTTTGCACCTTGGTATGGTTTTTTCAACTAGCTGCTGGCACCGAGATCCGCACGGTCTACCTTGGATAGAGTTTATGCACTCGGGACCCGCCAAGATTTGgtACGGGATTCCTGATGAACAGAGTGCAAACTTCCGTAGAGCAGTCGAGTTGCTCTGCCCTACTTCATGTCAAAATAAGTCTCTTTGGCTGTCATCTGATATAGTCATGATCCCACCCAACCTGCTCTTAGAGCACAATGTGTCCCTTTCAAGGGTGGAACAAAAGCCTGGAGAGTTCATTGTAGTCTTCCCCAAGGCTTATTCTTGCTCAATTTCTACAGGATATACTGTATCAGAGAGTGTGTACTTTGCTAATAACTCTTGGTTAAAAAGTGTTCACCAAGTGTTTaatGAGGTGAGAGAAAGCTGCGAACCAACGATGTTTTCGCTGGAGCAACTCTTATTAGCGGCTGCACGAGACCCTCGCTCTCCGCTGTCGATTCTACCGGAAATATATGCCAGCCTCAGGACCATTATCAGTGAGGAACTCGACAACCGTACTGCCATAATCCGCTACAACGTTCCGAGTCGCAACTGCAAACAGTCCCGTAAGCGACCAGCGGGAGCGTGGAATGTTCGCGAACAAGACGAGTGCGAAATCTGCCGCGCTACACTTTATCTGTCCAGgGTACGAGGGCTACCAACAAAAAAGAGTACTGTTTGTCTCCAGCACGGTCGACGTTTACTAGAGAGTCGACGGCAAAGCGAGCGGGAAGCGCCAATAGAGATGGACGTCTTTTTATCGGAGATTGAATTAGAAAAAATTTTACAAGCTATCCAGATGCGGTTAGTCTCCTAA
- Protein Sequence
- MSTTTRKVQAQRKFAQGAYIPQKNTNNVSNTTAERKTDLISPKETNNNFFHNSSSAKSLLDIVCFQNVHVHKQPIVLLERLHESQSVFAPGATNRVTRVQNHRNMLSNEAVSQKSKPTAKKHCMLLRSRTNQRPQKRVNIKEINLAPRRIITRNIRKFLSSLNRSDSSDFNTDDDKPLAYFTRTVKARKIKRNIKTTTECKIPRRNAIDEPVAMSVDKDVQTYKNASLAPKLPDSSLPRDEPVAMSVDKDVQTHKNASLVPKLPDSSLPRDSRHAMQPDEMLYIPVNSPSIPQVSVAVSVDKVEVSSEASFGSQALDAPLLWDEPVAMSVDKVDKVVQWSPVPSLGLLDSPLPWDETIAQSVDEPVPSIATSLGSQRDELPLPRNDPIARSDDEPSPVMSPVQSIVISLGSQQEESPLPRANEEVPTVQGGTRVIEFVEDTIDWASTDGEQNIEKTVPAGCSINELNAWIQETIKQKKHVNRFKIPHPPRPKQSSRLQTVAGRQIFTNNFDMPSTSTVRAFSCPSKRYTTSREVLQAPKEELDKRCMKCKYCDFVNRVFERSSERKTPSSSDNSLSTQNEGFSSDSNTSSVQWNTSYSHKRKRRCRQAFRKQSVNTGNMGGERMSSELPPSSVLPLPRPRSNNRPQPPQPIKSFYSKDSNNIFEFKLSWLSHKKKFILSADPIPSPSDIVMTELNSATDSNIKNSVLGHLNNIRKSVINNDDGAIPSTSRGPDPEPVVTMPVKENSNNVGTRNRGGCQAHLNSLRKSVINNDDGAIPSTSRGPDPEPVVTMPVEENSNNVGTRNRGGCQAHLNSLRKSVINNDDGAIPSTSRGPDPEPVVTMPVKENSNNVGTRNRGGCQAHMNSLRKSVINNDDGAIPSTSRGPDPEPVVTMPVKENSNNVGTRNRGGCQAEKLKAAFPRHNSKAELVDAPVFYPTEDQFLDPIAYFNEIMPTAAKFGICKIVAPGTFKPKCVFDEEIKFGVTNQYISRLYTRWGPASREMSAIKAHLASQSVVFTRPPLLNGIEVNLPKLYELVQRCGGLKKVIEKKRWSRVAEEMKLTKSPNIEKKIDQIYVKYILPYDTMSNKERLEIMNNVEVNWNKKNKRMLDRALNPLHRQKRLLGESESSEEDDDDDLNITQALIEAEDCIVTGRYMNLATFKKVANKVIATHFSTPHPATQDVESAYWKLVIMAKEHVCVNAASIDTGEEGYGFTKNQRDIIGRHPWNLKVLSCNPGNILRYLGSKLGVTVPTLHLGMVFSTSCWHRDPHGLPWIEFMHSGPAKIWYGIPDEQSANFRRAVELLCPTSCQNKSLWLSSDIVMIPPNLLLEHNVSLSRVEQKPGEFIVVFPKAYSCSISTGYTVSESVYFANNSWLKSVHQVFNEVRESCEPTMFSLEQLLLAAARDPRSPLSILPEIYASLRTIISEELDNRTAIIRYNVPSRNCKQSRKRPAGAWNVREQDECEICRATLYLSRVRGLPTKKSTVCLQHGRRLLESRRQSEREAPIEMDVFLSEIELEKILQAIQMRLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158500;
- 90% Identity
- -
- 80% Identity
- -