Basic Information

Insect: Parelbella ahira
Gene Symbol: -
Assembly: GCA_018244795.1
Location: DWME01022346.1:2195-3814[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2 1.4e+02 3.8 1.3 2 23 218 240 215 240 0.84

2 10 0.015 1 10.6 2.2 1 23 246 268 246 268 0.98

3 10 0.00078 0.055 14.6 6.5 1 23 274 297 274 297 0.97

4 10 0.00021 0.015 16.4 1.3 2 20 304 322 303 324 0.94

5 10 1.7e-05 0.0012 19.8 2.9 2 23 342 363 341 363 0.95

6 10 9.8e-07 7e-05 23.7 1.7 1 23 370 392 370 392 0.98

7 10 4.7e-05 0.0033 18.4 1.0 1 23 398 420 398 420 0.99

8 10 2.4e-06 0.00017 22.5 1.7 1 23 426 448 426 448 0.98

9 10 0.00018 0.013 16.5 4.1 1 23 454 476 454 476 0.98

10 10 0.00092 0.065 14.3 4.1 1 23 482 505 482 505 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2	1.4e+02	3.8	1.3	2	23	218	240	215	240	0.84
2	10	0.015	1	10.6	2.2	1	23	246	268	246	268	0.98
3	10	0.00078	0.055	14.6	6.5	1	23	274	297	274	297	0.97
4	10	0.00021	0.015	16.4	1.3	2	20	304	322	303	324	0.94
5	10	1.7e-05	0.0012	19.8	2.9	2	23	342	363	341	363	0.95
6	10	9.8e-07	7e-05	23.7	1.7	1	23	370	392	370	392	0.98
7	10	4.7e-05	0.0033	18.4	1.0	1	23	398	420	398	420	0.99
8	10	2.4e-06	0.00017	22.5	1.7	1	23	426	448	426	448	0.98
9	10	0.00018	0.013	16.5	4.1	1	23	454	476	454	476	0.98
10	10	0.00092	0.065	14.3	4.1	1	23	482	505	482	505	0.97

Sequence Information

Coding Sequence: ATGTCAGCTGAAGAGGAGACCTACTGCCGCTTATGTGCAGATGTCACGCCGAAAACTCAGCTTATATCGCCAGAAGAAGACGTCGCTATTTCTTCCAAAATAACAACTAAGTTACTATGGATAAACGTTGATATAACATCTTCTTCTCTTCCAAACACAATATGTTTTGCTTGTTTTGATTCATTGGAGCGTACTTGGGCTTTTCTATGTAATGTTCGCGCTGCTCAAGAGAAATTGTTGACAATATTCTCAGCAAAAACTAATCGCAATAGTGTTGAAGATGTGGAGATTATTAGCAACTCCAACGCTGGTAAGCCAACGGATGCAAACTGGGAATCGTTCCAGGAGCTTAAAGCCGATATTAAACTCGAAAAAGTTGAGAAAAACAGTGGTATTCCTAAAGAGACTCTTCTTGATGTTGATTTTGAAATCAAGGCTGAATGTCAGAGTGATAATGAGTTTCAAGACcatatagatatagattataCAATAGGCTTTCATTCCACCGACAGTGATATGCCATTAGGACTGACAGTTAGatcgaagaaaataaaaaggaaacataaaacaaagtttAGAACAGAGAAACTTTATTCATCTGGAAGTATTGATGTTTCATCTATAAGCACCACTTGGGAGAACTTTGTATGCAGCTGTGGGAGATGTGATGCTCAGTGCAAAAACATTGCAGCATTGCAAATGCATTCATTGCAAATACACAACCAATGTTGCATTTTTAAATGTCTTGATTGCAATAAGAAATTCCTTACATACAAGCCTTTTATAACACATGCAAGGACACATATGAAAGATCTACGATACTGTTGTGAATACTGCAACAATATCTTCACTAAGTCGTCATATTTGAAGCACCACCTGAATAAGGAGCATATCTGTGTGTACTTAACAAAATGCAGAAACTGTGGTATGTGTTTCGACACAAGTGAACAATTGAAAAACCATCAAATTGAATTTGGAACTGAgtttaaaagaaagaagaagTCAAAGGCTGAATTAATTCTGAAATGTGAATTttgtaaaaaagaatttaaatcaaAGAGTAATTTGCAACAACATAAATTGTTGCATACAGAGCGCAGTAGAGATTTCTCTTGCCATATTTGTGGCAAAATGTTCTTCACAAAAGGTGCATTAGGAACACATATGAATACACACAATGAGACTAAACCTTATAAATGTCAGCATTGCCCATTAGCATTCCGAGCCCGAGGTAACTTACTATCACACATAAGCCGGCACTCAGGAACTAAACCCTTTGTATGTGAGCAGTGTGGAAGAAGCTTCAGAGTCAAAAGGCATTTGAAATCCCATTTAATTGTTCACACAGACTTAATGCCATACAGTTGTGAGTtctgtaacaaaacatttagaTTCAAAACCCGCCTGAATCTTCATTTAAGGCAACACACTGGTGCTAAaccatataaatgtatatactgCAGACGAGACTTCACAAATggttccaatttcaaaaaacaCATGAAACGACGACATGGCATTGACACTTCCAAACAGAAATTTGACAATGTTGTACCAGATATAAAACCTTGTAATGATTTGGCAGATATTCCTGCAACAGGTACTAATGCtcaaacataa
Protein Sequence: MSAEEETYCRLCADVTPKTQLISPEEDVAISSKITTKLLWINVDITSSSLPNTICFACFDSLERTWAFLCNVRAAQEKLLTIFSAKTNRNSVEDVEIISNSNAGKPTDANWESFQELKADIKLEKVEKNSGIPKETLLDVDFEIKAECQSDNEFQDHIDIDYTIGFHSTDSDMPLGLTVRSKKIKRKHKTKFRTEKLYSSGSIDVSSISTTWENFVCSCGRCDAQCKNIAALQMHSLQIHNQCCIFKCLDCNKKFLTYKPFITHARTHMKDLRYCCEYCNNIFTKSSYLKHHLNKEHICVYLTKCRNCGMCFDTSEQLKNHQIEFGTEFKRKKKSKAELILKCEFCKKEFKSKSNLQQHKLLHTERSRDFSCHICGKMFFTKGALGTHMNTHNETKPYKCQHCPLAFRARGNLLSHISRHSGTKPFVCEQCGRSFRVKRHLKSHLIVHTDLMPYSCEFCNKTFRFKTRLNLHLRQHTGAKPYKCIYCRRDFTNGSNFKKHMKRRHGIDTSKQKFDNVVPDIKPCNDLADIPATGTNAQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00025427;
90% Identity: -
80% Identity: -