Pahi019703.1
Basic Information
- Insect
- Parelbella ahira
- Gene Symbol
- -
- Assembly
- GCA_018244795.1
- Location
- DWME01021823.1:1-1626[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-10 3.9e-07 30.3 0.0 4 34 19 49 17 57 0.89 2 2 5.3 6.4e+03 -2.4 0.0 30 40 385 395 385 397 0.82
Sequence Information
- Coding Sequence
- CCTCTGAAAATACTGACagagaagaagaaaaagaagcaGACATATCCAGAACAGGACCTCTTCAGAGCGGTGGAGGAGGTGTGGCACAAAAGGATGACCCAGACCCAAGCCGCTAAATACTACAATGTACCAAGATCTACCATTTTCGACATGCTGATCAAGAATTATGGCAAGCCGCCAAAATTGGATCCAAACGACGAGGCGGTGAAGAACAAGAAGAAGAGTAAAGACAGATCCCAGGAAATGGCAAAACACGCCACAAACATCCTCACAATCATGGAACACTCCAACGCAACGCCGATTCGTTGCCATGGCGACGGCGGCTACATGTGCTGCTTCTGCGACCACCAGTACATCAGACCAGGGGACCTGAAGACTCACACCATACAGTCTCATGATATCAAAACTAAACGCACCTTTCCCAAGGGAAAACGCCCGTCTTCCTACTTCGTGAAACTCGATATTTCGTTTCTGCAGTGCACAATCTGTGGTGAGAAAATCGGTACATTGGAAGACTTGGTACATCACTTGATAGATGTTCATGGGAAGAAAATGTTTACGGATATCAAGAACCATATCCTGCCGTTCAAGTTTGAGTCCGATGAGCTGAGGTGCGTAGTCTGCGGGAACGTGTTCAATAGCTTCAAGGTCCTGCAAGAGCATCTTAATGTTCATTACCAGAACTATACTTGCGACGTATGCAATACCGGTTTCGTGTCCAAGATGATATTGTACAATCATTCCAGAGGTCACAACTTGGGAGTGTTCAACTGCGATCAGTGCCCCAAGGTGTACAACACGCAGCGCAAGTTGCGCTCTCACCAAAGCTTGGTCCACAGACATAACTACATGGTGAGCAAATGTGGCTACTGTAATGAAAAGTTCAAGTCCTACCACCGAAAGGTCGAACATCTGACACGAGTCCACAACGTCAGAGCAATGAAGTTTTTATGCAACGCCTGTGACAGAAGTTTCAATACCCAAGCTGGGTTGAGAATTCACAGAAAAAGAGACCATCTACTGGAGAGGAAGTATAAGTGTCCACAGTGCGATATGAAGTTCTTCGCGAAGGCAGCGGTTGAGTTTCACATGCTGAAGCACAGTGACGCGAGGGAGTTTCAGTGTGATGTCTGCAAGAAATCGTACAAGAGGAAGAGTACTCTGCGAGAACATATGAGGATACATGAGAACAATCGTCGCTTCAAGTGTGAATTCTGTGATGTGTCTTTCATCCAGAAGTGCAGTTGGAGGGGGCATATGCGAACAAAACATGGCGTTATCAGTTGA
- Protein Sequence
- PLKILTEKKKKKQTYPEQDLFRAVEEVWHKRMTQTQAAKYYNVPRSTIFDMLIKNYGKPPKLDPNDEAVKNKKKSKDRSQEMAKHATNILTIMEHSNATPIRCHGDGGYMCCFCDHQYIRPGDLKTHTIQSHDIKTKRTFPKGKRPSSYFVKLDISFLQCTICGEKIGTLEDLVHHLIDVHGKKMFTDIKNHILPFKFESDELRCVVCGNVFNSFKVLQEHLNVHYQNYTCDVCNTGFVSKMILYNHSRGHNLGVFNCDQCPKVYNTQRKLRSHQSLVHRHNYMVSKCGYCNEKFKSYHRKVEHLTRVHNVRAMKFLCNACDRSFNTQAGLRIHRKRDHLLERKYKCPQCDMKFFAKAAVEFHMLKHSDAREFQCDVCKKSYKRKSTLREHMRIHENNRRFKCEFCDVSFIQKCSWRGHMRTKHGVIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01153238;
- 90% Identity
- iTF_01153238;
- 80% Identity
- iTF_01153238;