Pful001766.1
Basic Information
- Insect
- Parascotia fuliginaria
- Gene Symbol
- -
- Assembly
- GCA_963082885.1
- Location
- OY720171.1:6516272-6525020[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.74 80 5.0 2.0 1 23 55 78 55 78 0.95 2 20 0.0033 0.35 12.4 3.2 1 23 85 108 85 108 0.97 3 20 0.0018 0.2 13.2 1.0 2 23 229 250 228 250 0.97 4 20 7.1 7.6e+02 1.9 3.1 1 23 256 278 256 279 0.94 5 20 0.22 23 6.7 3.4 2 22 517 537 516 537 0.95 6 20 0.027 2.9 9.6 2.8 1 23 636 658 636 658 0.95 7 20 0.63 68 5.2 0.3 2 23 795 816 794 816 0.96 8 20 0.0055 0.6 11.7 0.6 2 23 893 914 892 914 0.96 9 20 0.24 26 6.5 0.4 1 23 922 944 922 944 0.98 10 20 0.12 13 7.4 3.4 1 23 972 994 972 994 0.95 11 20 0.00025 0.027 15.9 4.0 1 23 1002 1024 1002 1024 0.99 12 20 0.013 1.4 10.5 1.3 1 23 1111 1133 1111 1133 0.99 13 20 6 6.5e+02 2.2 3.0 1 19 1189 1207 1189 1211 0.91 14 20 7.4 8e+02 1.9 0.2 2 23 1218 1239 1218 1239 0.96 15 20 0.017 1.8 10.2 0.8 1 23 1301 1323 1301 1323 0.95 16 20 0.01 1.1 10.8 0.7 1 23 1329 1351 1329 1351 0.95 17 20 0.0071 0.76 11.4 2.6 1 23 1441 1463 1441 1463 0.97 18 20 0.00018 0.019 16.4 1.4 1 23 1469 1491 1469 1491 0.99 19 20 0.35 38 6.0 2.9 1 23 1581 1603 1581 1603 0.96 20 20 0.011 1.2 10.8 5.6 1 23 1614 1636 1614 1636 0.98
Sequence Information
- Coding Sequence
- ATGCTACAGCAGATGTCCTCGCCGTCGAGCGCACAAGTCGGCGAGGTCGCGACTGTCTTCGAGCGCTATCTCGAAGGCCGCGTCGGCGGCGACGTGTCTTCGGAGGCCTCCTCGGATGCCGCGGAAGATTTAGAGTTACCACAGTGCAAGATAAAAAGGAACTATCATTGCAATAAGTGCACGTTCACTACGCAGAACCCGCGCGCTTATCTCGTTCACACGCGCGACGCTCACTTCGTAAAActtaagatattttattgtccACACTGTGTTTACGCGTCGAAACATCAACAAAAACTTATACGACACATAAAAATGGTTCATGAAGAGACAGAGACACAGTCGCGTAGTTCAAAATCAACAATGTCAGTTAAGTTGGAATCAGAGTTATCAATCTCCGCACAAGACGTCACAGATCAACCTATGCGGATAGAAGATCTGCTCGAAGAAGTGGAGGACTGCGAAGATATGATGATGGAAGTTGATGAAGGTCACGACTACTCCATGGAAAACGCCGACGACATCGATGTTGTCGGCGACAATGGTATGGATCAAGCAGCGCCCTCCAACTTCTCAAAAACAAAAAGCAACGTAAAATTTTTCACTTGTGATAAGTGTACCTACGTTACGCATATCAGAGCTAGATTTACAAAACACGTCAAGTATCATTCCATGCCTATGATCAAATGCACTATGTGTGATTTCCGGACACCATACAAATGGAACTTGGACCGTCACATGAAGAACCATGGTGGAAGTGGAAGTTTTCATTGTTCCATGTGCAACTTCACTGCAGACATTAAGCAAAGTTTGACGGTGCACGAAATGAATCATCACACGCCACCAGTAGGCCAATCACTAGCGAGTCGTCGTCGCAACCGGGTGGGCGCCAGCGACACGGCTGCTGTCGAATACGACACAGCAAGCGCGTCGTTCCCTAAGGAGGAAGAAGGGAGCGGCGACTCGCAATCCTCACACTCGGTCTCGAACATGGGTCTACAGTACGCAGAAAGGGAAATACTTAGTTGTAAAAGTGACTCCAACGACGGGTCGCACTCTGATACCAATGGCAAAAGAGACCAAGGTTCACCCAACCACAGTTCAGATGAGTCCAAGcatcaaaaacaaaacagaaaaatTCCACGACCCATACCACAACTCATACCGTTGAATTCATCGACGCCGAACCAAAATCAAAAGACAACTGGTGAACCTCCtcacaaaaaatttaaagaatctTCACCTGTGGATCTAACAGATTCCAATTCTGGCAGTAAATCTGAAAATTTGCCGTGTGATATTACACTATTGCCTGTAAACAGCAACCAATCAACTAAGGAAACTGGGAATCGCAAGAAGAATGAATCATTTTTTGACAGATTAAAAGAAAGGCTATTAACAGAAACTGGAGAAGAAGGATCTCTTATATGTAAAAATTGCGGATTTGAAAGTAAATGTTTATCAGAACACTCTGTACATGAGAAGAATTGCTCGCCGCAAACCAACCGAATCAATACAAATACATCGCTATCAAGCTTAAGTTCCACACGATGTCAGAATTGCAGGCATCGTTGTAAGTCAAGTGCTGACTTATACATTCATATGCAAACCTGTCGGAAGAATGAAAAATATGGAGATGGAAAcatacctgaaaataaaaatgaagacaGTAACGATACATCTATTCCAAGTCAAGAGAAAGAGGCCGAGCGACATCCAATGGAAAACGTTGTTTTCGTATGGAACAATATTAATCAAGATACCAACAAATTTGATGTACCattagatattaatataaacgACGATTCTACTCTGCCAGAATCAAATAGAAGTTTCGAAATTGAAACCGTTGACGAAAACGAAACTATGAATTTGTCGCCAAGTCAAGCCATTGGACGAAAAGTGTTCAAATGCCCACATTGTGGATTTTTCTCAACAACTGCTTCCAGATTTCATGTTCATATTGTTGGTCATTTAAATAAGAAGCCATTTGAGTGCTCTCTTTGCAAATACAAATCAAATTGGAGATGGGACATCACGAAACATATTAAACTGAAGTCCGCTAGAGATCCTGAACATAACGATGCTAAAGTACTTATGACTGATGAAACAGGCAGACGAAATTACAGCAAGTATAACAAATTCTTAGCTATGCCAATATCGAACGAGTACGGGGAAAACGAGTTCCATTATCTGGATTCCAACGCAACCCTAGACGGAGCAATGGAGATCGATGAAACATTCCATGATATATCTGATGTTATGAATGCGCATTATGAAATGCAGCCACTCAATCTGCAGACTCAGAATATGGATGACAAGTACGACTTGCTTGATAGCAGAAGTTTCAATGATATGAAAAAACCTAAGAAAACTCTATggaaatgtaaaaaatgtaattacaaAGATCCATCAAAAGAAGCTCTATTAGAGCATGTTCGTGAACACTCAAAAGATGGTATGCATGATGAGCCGCACAAGCCCGCCATCATAAAGAAGTCAGAGACTGCTCCGGACCCGGCAGACCTCGCGTATCGTTGTGGACACTGTCATCAATTATCCAATTGGAAACATGTAATACAGCGACACTGCCGTTTAAAACACGATGGAGTAATAAAAGTGATAACTACAGTGAAACCAAAGCCCGATCCAATGAGCTTGGACGAGATCAACGACACGTGTAACAAATGTCCATTCAGATCTAGTGACAAGAAACTACTTATAGCCCATTTGCAACAACATCAACCATCGCCGCAATCTATATTCAAATGTTATTTTTGCCCATTCTTTGTAAAAGATGACCAGGAATTAGCCCAACATCTCTTAGTACATGGCATTACTGAACCAGAAGATTATATTTCTAAGGCTATGGGCAGTAAATCTCCATTACGTACAGAACAACAAGCAAAACGACATAGATGTACTGAATGCCCGTACGAAACAAACAGCAAATCCCAATTCATGTACCACGAACAGTTTCATCGCACTCCGGCAGACACACCATACAAATGCCCAGAGTGTAACTACAGTGTGTCTAAGAGGCACTTGCTGCACCAACATTTAAGGGTACACGGTATAATCACAAAACGACTAGACTTAGAATACGGATTAGATCAGCCGTCAACATCATCGCTCAATAAATTTGATGGCAAAACAGAATCTCACACTAACTTTTCGGAAGAAATCCCATTTGTTTGGGTCTCAGCTAAAAATGAGTTTCATAAAATGTACAAATGCCGATACTGTTCGTATGTTAATTCCCAAAAGTGCAAAATCCCCAATCACGAAAAAAttcattgtatttattttgaaaacaatgaAACTACAATTTACAAGTGTCTCGATTGTAAACTAACGTGTGATAATGCTGCCAAGCTTGCAGAACATTCGAAAACACATGGTGAAATATACGGGCGTATTTATTGCCCTGTTGAAGAGGATATTCCAGATGAAGAACAAATCTCAAAACTAAGGAAAGTTATAGAAATGGAAAAGACAAGTAATACTAATAACTTTCCTAAAGAAGAAGGAGCTACAAACGAAAACCGGGAGATAAAACTATTGTATTTTTGTCACAAATGCCCGGCGAGATTCTTCGAAGATAATGAATTACAGAATCACGACAAATTCCACAACTTATCATTATACAATAAGTGTAAAAGTTGTGAGTTTTCTGTGCCTGAAGAAAATGATTTAGTGTCACATACAACAGTACATACAGATGAATACAACACTAAAACTAAAATGCTTAAATTTGTCCATAATTCTCATCCCTCTCATAGAGAACCTCGATTGGAGCTTGTACATTGTCCCACGAGTTCAGAAATTTCATGGATTGCTACAGGGCCAAGTATAATCGATAATCCTGAAAGTGTTATGAAAAAACATGTGCCAAAGCAATATTTCTGTAAATTATGTCCTGCAAAGTTTTTCAAAAGTTCAGCTCTCAGCTATCATATGGGGTTGCATGGAGGAGAAGGTGAACATAAATGTAAAACATGTAATTATGCCGTAAAAAACATAGGCAATTTAGCTAAACATGAAATACTTCACGAAACTGATAATAAACCAGCAAATTGTGATTATGAGTCAGGTGAAGATATGGACTATAAGAATATTCCATTATCAGGTACAGATTTGTTCCAGAGGAAGACTGAAGCTCAAAAAAGAGTATTAATCGATAAAGATAAACTAGTTAAGCCAAATGATCACTTTCCGCCTGTGTTACAAGCTGATCCACAATTTGGATATTTGATGCATGGAAATCCCGAATTTATTTATCCCACGTATCTTAAAAATGGACGTCAAAAAGAAAAACGTTATAAATGCCACAAGTGCCCCTCCGCGTTTGAAAAACGAGAACAATATAAGATTCATTTATCATTGCATGGCTCTAAACAAAGGTACAAATGTGAACTATGTGATTATTCTGTTAAATATTATGCTAACTACGTCCAACATATGAGGAAACACCAAATGAATGATGAAGCGCAAGCAGAGAGAAAAAAGGGAACCAACGGTTTTATTTTGACTGATAGTCATGAAGACTCTAAACAAGATAATCCAGATATTAAACTTGCAATCAAAACTATGCCAAAGGGACCTCCTAAAAGTGATTTTCAGCAATTCTCTATCAGTGATCAGCAAACCCTTAGATTGCTGCAGAGAAGACGCTCAATAAACGACTGTGGAAAGGACACCGGAATGTCTGAAATTTCACCCACGAAAGAACGTAAAATGCATATGTGTTTGCTGTGTCCTTACACAAACCAACGTCAAGATTCCTTGACCAATCATTACAGAAGACATGGTGACAATGATGTCCTTATTGCAGGCAATCATAAATGTTCCCATTGCGATTTAGTGGTCGTACAGTCACATTTCCTTCGAGACCATTTGAAAACACACTTCAATTACCACAAAACTCTTATACCGGAATGTTTCGTAGCAAATGAAGACGTTAGTTTTACTGTTACTAAGTTGGAAGATGAAGGCAGTGAGTCTGTTGATCTCAAATTAGACGTGCAAAATAAGAGTATCGCGTGTAATGGCGACAAaatgtttgttaaaattaaaacaggAGAACTGTTGGTAgagtaa
- Protein Sequence
- MLQQMSSPSSAQVGEVATVFERYLEGRVGGDVSSEASSDAAEDLELPQCKIKRNYHCNKCTFTTQNPRAYLVHTRDAHFVKLKIFYCPHCVYASKHQQKLIRHIKMVHEETETQSRSSKSTMSVKLESELSISAQDVTDQPMRIEDLLEEVEDCEDMMMEVDEGHDYSMENADDIDVVGDNGMDQAAPSNFSKTKSNVKFFTCDKCTYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFHCSMCNFTADIKQSLTVHEMNHHTPPVGQSLASRRRNRVGASDTAAVEYDTASASFPKEEEGSGDSQSSHSVSNMGLQYAEREILSCKSDSNDGSHSDTNGKRDQGSPNHSSDESKHQKQNRKIPRPIPQLIPLNSSTPNQNQKTTGEPPHKKFKESSPVDLTDSNSGSKSENLPCDITLLPVNSNQSTKETGNRKKNESFFDRLKERLLTETGEEGSLICKNCGFESKCLSEHSVHEKNCSPQTNRINTNTSLSSLSSTRCQNCRHRCKSSADLYIHMQTCRKNEKYGDGNIPENKNEDSNDTSIPSQEKEAERHPMENVVFVWNNINQDTNKFDVPLDININDDSTLPESNRSFEIETVDENETMNLSPSQAIGRKVFKCPHCGFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAMPISNEYGENEFHYLDSNATLDGAMEIDETFHDISDVMNAHYEMQPLNLQTQNMDDKYDLLDSRSFNDMKKPKKTLWKCKKCNYKDPSKEALLEHVREHSKDGMHDEPHKPAIIKKSETAPDPADLAYRCGHCHQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPMSLDEINDTCNKCPFRSSDKKLLIAHLQQHQPSPQSIFKCYFCPFFVKDDQELAQHLLVHGITEPEDYISKAMGSKSPLRTEQQAKRHRCTECPYETNSKSQFMYHEQFHRTPADTPYKCPECNYSVSKRHLLHQHLRVHGIITKRLDLEYGLDQPSTSSLNKFDGKTESHTNFSEEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCIYFENNETTIYKCLDCKLTCDNAAKLAEHSKTHGEIYGRIYCPVEEDIPDEEQISKLRKVIEMEKTSNTNNFPKEEGATNENREIKLLYFCHKCPARFFEDNELQNHDKFHNLSLYNKCKSCEFSVPEENDLVSHTTVHTDEYNTKTKMLKFVHNSHPSHREPRLELVHCPTSSEISWIATGPSIIDNPESVMKKHVPKQYFCKLCPAKFFKSSALSYHMGLHGGEGEHKCKTCNYAVKNIGNLAKHEILHETDNKPANCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGTNGFILTDSHEDSKQDNPDIKLAIKTMPKGPPKSDFQQFSISDQQTLRLLQRRRSINDCGKDTGMSEISPTKERKMHMCLLCPYTNQRQDSLTNHYRRHGDNDVLIAGNHKCSHCDLVVVQSHFLRDHLKTHFNYHKTLIPECFVANEDVSFTVTKLEDEGSESVDLKLDVQNKSIACNGDKMFVKIKTGELLVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00870188;
- 90% Identity
- -
- 80% Identity
- -