Basic Information

Insect: Parascotia fuliginaria
Gene Symbol: RREB1
Assembly: GCA_963082885.1
Location: OY720193.1:6426117-6442537[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.086 9.2 8.0 0.4 1 23 94 117 94 117 0.94

2 11 0.021 2.3 9.9 0.1 1 23 308 330 308 330 0.97

3 11 0.0012 0.12 13.8 0.4 1 23 339 361 339 361 0.99

4 11 0.00071 0.077 14.5 2.0 1 23 367 390 367 390 0.97

5 11 0.0029 0.31 12.6 1.6 1 23 737 760 737 760 0.96

6 11 0.00024 0.026 16.0 1.3 2 23 956 977 955 977 0.97

7 11 0.024 2.6 9.7 5.3 1 23 983 1006 983 1006 0.97

8 11 0.086 9.2 8.0 1.3 1 23 1039 1063 1039 1063 0.91

9 11 0.044 4.8 8.9 0.2 1 23 1085 1108 1085 1108 0.96

10 11 0.022 2.4 9.8 0.3 2 23 1148 1169 1147 1169 0.92

11 11 0.027 2.9 9.5 5.3 1 23 1175 1197 1175 1197 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.086	9.2	8.0	0.4	1	23	94	117	94	117	0.94
2	11	0.021	2.3	9.9	0.1	1	23	308	330	308	330	0.97
3	11	0.0012	0.12	13.8	0.4	1	23	339	361	339	361	0.99
4	11	0.00071	0.077	14.5	2.0	1	23	367	390	367	390	0.97
5	11	0.0029	0.31	12.6	1.6	1	23	737	760	737	760	0.96
6	11	0.00024	0.026	16.0	1.3	2	23	956	977	955	977	0.97
7	11	0.024	2.6	9.7	5.3	1	23	983	1006	983	1006	0.97
8	11	0.086	9.2	8.0	1.3	1	23	1039	1063	1039	1063	0.91
9	11	0.044	4.8	8.9	0.2	1	23	1085	1108	1085	1108	0.96
10	11	0.022	2.4	9.8	0.3	2	23	1148	1169	1147	1169	0.92
11	11	0.027	2.9	9.5	5.3	1	23	1175	1197	1175	1197	0.97

Sequence Information

Coding Sequence: ATGCAGGGTGCTGCCAGCGCGCCCGCGCCTCCCGCGGCTGAACCGCCTAATTCACAACAAATCAAAACAGAGGAGGTCATCAGCAAAGCTAAAATCGAGGCCGTCGAAGAAATGGACAGCGTTAAAATTGAACAACAGGAGTTCAGAGCCACTAGGACCATGAGCATCGACAGTGACAACAGGTCCGACAGGAGCGAAGAGGAAGATTTAAGGAGAGCTCGCAAGAGGGCGGCGTCGACCTCACCTTCACCCATACCTATGGACAAAAGAATCGCAAGGTTTGAGTGCCCCAAATGCAGACAACGGTTCGACTCAGTCAACGCTTACGACATTCACCGTTACACCGCTCACAGTGATGATACCAAGACTGGTTTTGACGATCTAACTTTCGTCGACTTTTCCAGCAAAAAGTTTCCAGAAATCGCTCGTGGAGTCTGTGAAAGAAATCCTCACATATCAATAACAGATCAGCGTTACAGATGTGACCTTTGTGCTAGAGATTTCCCCTGCGGACAAGCTCTGGATATTCACAGAAAATCATGTACATCTAGTACTCGCATCCCGAGTCCTGAAAGAGACCGCCGAGAGGACTTCTTCGCTAAACTAGATCTTAGGAACAGGTCCTTCGGTATCCCCGGTACGTTAACCCCACCTATGGAGAGATTTACTTCTAAATTTGATGATGGTCACTTAACTACAAATGGCATCAGACACATCGATGCCGCTCGCGATTTGGCTGACATTCAATCGATATTGAACGTTACATCGGCTGGTGGCCTTTTAGAAAGGCTTACAGGCTCAAGAGTGGCTTTAGAAAGTGCAGTACTCACCCCACCCGATACAATCATAAAGGAAAGAGATCAAGAAGAAACGCAAGATAATTTTGCAGCGGAATTCAGACGAATGAAGCTTCGTGGAGAATTCCCATGTAGGTTATGCCCCGCTAAGTTCCCGAACCTCCGAGCTTTGAAAGGACACAATAGAGTGCACTTAAGTGGAACCGGCCCAGGACCTTATCAATGCAACATGTGCCCTCATGCCTCTTTAGATAAGGCGGCGTTGGTGCGTCATATGCGAACACATAACGGCGACCGGCCTTACGAATGCGCCGTGTGTAATTACGCTTTCACAACTAAAGCTAATTGCGAACGTCACTTAAGAAATAGACACGCTAAAGTAACGAGGGAAGATGTCAAAAGATCTATTATTTATCATCCATCTGAAGACCCGAATAATGATGAAGTTAATTCTAAACTTGCTAGGGATGAAGTGAAAAGATCACTCGCATTCCACACGCCCGATGTGGATAGGCGAAATGAAAGTACCGGCCGCGATACACCATTGACCCACTTCACTCCTCCATTTATAACCGACAGACATCCTGTCGCCAATTTGACATCGAAACCGTTACCTGAATCACCCTTGACCCCAAGAGATGTTGAACAACCTGTACCTCGTATTAAAGTAAAGGGCATTGGTCAGTTAACGCAAATACCTGAATTCAGACCTCCAGAGTTGTCTTACAAAGTGAATGACGTTCAACCGGATTCATATGACGAAGAAGCTCCAGTGGACTTAAGCACAAGTGACAACAACAGCTGCGACGTTCTTGATCTCAGTAAGAAGAAACGTGAAAATGATTCTGATGAACCCAAAGCTCCACCGCGTCCATCTTTTGACCATGATCCAGCCAGCGTCGCCGCATCAGCGTTTGAGAAGACAAGATTTCTTCTAGCTCAGCAAAGACTCTTCGAATCGTCTCTTCCTAAAATAGACCCAGCTTATTATGCCTCTCAACTTTCACAACTCTATGCTGGTGCTGTCCCTGGCATTCCAGGGCTACCGTTGCCACCGTCCTTTCCTATTGCCCCATATTTACTTCAACCCTCATTTTTTCCTCACCCAACTGATTCACAAGAACTTGCCGAAATAAAACAACGTATTCAGAAAGAGATTATTCGTGGACTAAGTATGTCTGGTGGTAGACTTGTCCCTAATGAGCAAGAAAACCAGCCTAAACTGGAGCCTGAAGAGGAAGAACAGAAACCAACGCTGGTTATCTCTCCTGAACCGTCGCCACATCCTGAATCTCCACGGCCATCAATGAATAATAGTCTTGTACCTCAAAGTGACTCTGTAAAAATGGTTATAAAAAACGGCGTTCTCATGCCGAAACAAAAGCAAAGACGATATAGAACGGAGAGACCTTTTTCCTGCTCTCAATGTTCGGCACGATTCACTCTTCGGTCTAATATGGAACGTCATGTGAAGCAGCAGCACCCCCAGCATTGGAGTGTTCGGCGGCCAACGCCAAGGGCTCCACCACCATACCCTGCCTCTGACTCGCTGGACCGCATGAAGTTTGCGCTATTAGCTCGCCATCTCGAAAGACCGCTGCAGCAATCTGAACGATCACCTGTACGCCGGGACTCGGATGAGGTTGCTGACAATGAAGAAGATGAGGATGATACCTTAGTTATAGATGAAGAGCCTGATCAAGATATGAAACCGGAAGATCACACGGCAGCTCGCCGTGCAGCTGCTGAGATCCTAATGGCTACATGCCAACAAGAGATAAACACAAAAGACTTCGATCTTAAAATTGCGGGGAACCTGATTAACAAGCCGATGCCTATTATTAGTGAGAAGACTGATACTGGAACTAATCCTATGCCGTTATTGCACCAAGAACCTCTGCCAGTACCAGTTGTGCCTACACGCAGTGATGAGGAGGAAGATGAAGAAGGGTTGGTTGCCTCTACTAGTGAAGGAAATAATTCTGGAAGCGATGAAAATAAATCAGAAACGGATACAGCACAGCCACCAAAGAAAAAGTCAGCATACAGTCTTGCGCCGAACCGTGTGTCCTGTCCGTACTGCCATCGAAAGTTCCCATGGTCCTCATCACTACGTCGCCACGTACTCACACATACTGGACAGAAGCCATTCAAGTGCCCACACTGCCCACTACTCTTCACTACCAAGTCTAACTGTGATCGTCACTTGCTAAGGAAACATGGGGGATCTGCCAGAGCTATCTTAGCAGAGCCTATCCCAGACAACGTATCAGCACCACAACCAGTTAACGACAACAGAGCTGTTCCTGAAAGACCTTTCAAATGCGCATCTTGTCCCACCAGCACTTTTTCTTCTTTAGAAACGCTGAAGAAACATATGTCTTCAAGACACGGAGATTCTCAACCAGAATCCCCAAATCCAGAGGTTGTCGAAGAATCTACTGAAGGATTGGTGTTTAAGTGCCATTTATGTGAGGCGTCTTTCGGAGACAGGAATGGCGCTTTGAACCATTTGGCGACGGGACATACTTCTGAATATGAACAGCTTGTTAATAAGGGTGCTTTGGATGCAGCCAGTGATAGAAGTGAAAgtgctgatgatgatgaaagggGGAAGTTTCCTGATCATGCTAATAGAAAGGTTGTTTGCGCATTCTGCATTCGTCGTTTCTGGTCGGCGGAAGATCTCCGCCGTCACATGCGCACACATTCTGGCGAGAGGCCGTTCGCTTGTGACCTGTGTCGACGTCGCTTTACCTTAAAGCACAGCATGTTAAGGCACAGGAAGAAACATCGCGATGAAATCACCGATGATGAAGAGGCGTCTCCCCCTGATGTAGTCGAAGATAAAGTTACTAATGGATATCGCTATCAGGATGACGACGGCTCTGGCAACGAGATCCCAAGCAATGTAAACAACAACAACTCTCCTCCATCAGCCCCTTACGAGAGGAAACTCAAACTGGACATGACATCGCGCAAGTACTCCTCAGAGGCCGAAAATGACATCGAAAACAGTGACTTGATCGGCAAACTTCTCGGCATTCCTGACAAAACCATCAATAAACTACTTTCGTCAGCCGACGAAGCAGCTAAAATCCTGGGAGTGAACAAATGA
Protein Sequence: MQGAASAPAPPAAEPPNSQQIKTEEVISKAKIEAVEEMDSVKIEQQEFRATRTMSIDSDNRSDRSEEEDLRRARKRAASTSPSPIPMDKRIARFECPKCRQRFDSVNAYDIHRYTAHSDDTKTGFDDLTFVDFSSKKFPEIARGVCERNPHISITDQRYRCDLCARDFPCGQALDIHRKSCTSSTRIPSPERDRREDFFAKLDLRNRSFGIPGTLTPPMERFTSKFDDGHLTTNGIRHIDAARDLADIQSILNVTSAGGLLERLTGSRVALESAVLTPPDTIIKERDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFHTPDVDRRNESTGRDTPLTHFTPPFITDRHPVANLTSKPLPESPLTPRDVEQPVPRIKVKGIGQLTQIPEFRPPELSYKVNDVQPDSYDEEAPVDLSTSDNNSCDVLDLSKKKRENDSDEPKAPPRPSFDHDPASVAASAFEKTRFLLAQQRLFESSLPKIDPAYYASQLSQLYAGAVPGIPGLPLPPSFPIAPYLLQPSFFPHPTDSQELAEIKQRIQKEIIRGLSMSGGRLVPNEQENQPKLEPEEEEQKPTLVISPEPSPHPESPRPSMNNSLVPQSDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPTPRAPPPYPASDSLDRMKFALLARHLERPLQQSERSPVRRDSDEVADNEEDEDDTLVIDEEPDQDMKPEDHTAARRAAAEILMATCQQEINTKDFDLKIAGNLINKPMPIISEKTDTGTNPMPLLHQEPLPVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSETDTAQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPIPDNVSAPQPVNDNRAVPERPFKCASCPTSTFSSLETLKKHMSSRHGDSQPESPNPEVVEESTEGLVFKCHLCEASFGDRNGALNHLATGHTSEYEQLVNKGALDAASDRSESADDDERGKFPDHANRKVVCAFCIRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHRDEITDDEEASPPDVVEDKVTNGYRYQDDDGSGNEIPSNVNNNNSPPSAPYERKLKLDMTSRKYSSEAENDIENSDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_00795186;
80% Identity: -