Basic Information

Insect: Parascotia fuliginaria
Gene Symbol: -
Assembly: GCA_963082885.1
Location: OY720201.1:5827951-5849073[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00092 0.099 14.2 0.9 1 23 207 229 207 229 0.98

2 12 0.0001 0.011 17.1 1.9 1 23 236 259 236 259 0.97

3 12 1.2 1.2e+02 4.4 3.8 1 23 263 285 263 285 0.96

4 12 0.0014 0.15 13.6 4.7 1 23 290 313 290 313 0.98

5 12 0.00025 0.027 16.0 1.7 1 23 317 340 317 340 0.95

6 12 0.011 1.2 10.7 0.1 3 20 358 375 357 376 0.95

7 12 0.0027 0.3 12.7 0.1 2 23 390 410 389 410 0.96

8 12 0.0018 0.19 13.3 0.7 2 23 430 452 429 452 0.96

9 12 2.3e-05 0.0025 19.2 3.4 2 23 462 483 461 483 0.97

10 12 2.5e-06 0.00027 22.2 1.2 1 23 489 511 489 511 0.99

11 12 2.9e-06 0.00031 22.0 0.3 1 23 517 539 517 539 0.97

12 12 1.4e-06 0.00016 23.0 2.1 1 23 545 568 545 568 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00092	0.099	14.2	0.9	1	23	207	229	207	229	0.98
2	12	0.0001	0.011	17.1	1.9	1	23	236	259	236	259	0.97
3	12	1.2	1.2e+02	4.4	3.8	1	23	263	285	263	285	0.96
4	12	0.0014	0.15	13.6	4.7	1	23	290	313	290	313	0.98
5	12	0.00025	0.027	16.0	1.7	1	23	317	340	317	340	0.95
6	12	0.011	1.2	10.7	0.1	3	20	358	375	357	376	0.95
7	12	0.0027	0.3	12.7	0.1	2	23	390	410	389	410	0.96
8	12	0.0018	0.19	13.3	0.7	2	23	430	452	429	452	0.96
9	12	2.3e-05	0.0025	19.2	3.4	2	23	462	483	461	483	0.97
10	12	2.5e-06	0.00027	22.2	1.2	1	23	489	511	489	511	0.99
11	12	2.9e-06	0.00031	22.0	0.3	1	23	517	539	517	539	0.97
12	12	1.4e-06	0.00016	23.0	2.1	1	23	545	568	545	568	0.98

Sequence Information

Coding Sequence: atgGCGAAGGCGAGATGTCGAATATGTTTTGTGGAGAATGTTCGGATGCATcccattttaaatacatatctTCAAGAAATATACGAAAGACTGTCTGAGATGCCGCTCAAATCTAAAAATGACCGACCTATACTGCTGTGCTACATCTGTTATAAAAGACTGCAGCATTGTTACAGATTACACTTGAACTGTATACGGAGTGAAAATCTACTTGCACAAGTGCCTGAGAAAGATCTTATTCCACTACCAAATCATTTAGGCAAGAGCCAAATATCACATACTACATTGTCTGAGTCAAGTAACGACAATGTCAAGTTAGAACTGGAAGATTATGATGATGTAGAAGTAAAGCAGGAGGATAAAGAAGATACTGAAGGACCCTGCTATGACCTCGATAACTCAAGAACATCAGACTCTGATGATAATATACcactaaaagtaataaaaaacgaGTCAGAGAGGAAATTAAGAAGGAAGAAAAGGAATAGAGTGAGGAAAAGGGATGATGATATGAAaaaaacTTTTCAAATAGACGCCCACAAGATTATTCTGTCCCGGGAAGAGCAGTTGTCTAACTTAGTGGCCCGGGCCACTTCACAAAACTACACTAAGTCTCCATACAGGTGTGACTTGTGTTATAAGGGGTTTGTGGATCTGAAAGCGTATGAGAACCATAAGATGAAGCATGATGAGAGCAGTGGTCCATACGCATGCGACATTTGTCACATGCGCTACCGCACCGCTCAGCACTTGAGAACGCATGTCATCACTGCGCATTCACGACTGTTCAAGTGTAATAAGTGTGAACATACTTCACATACagcaaaccaAGCAAGAGTACACGAAAAATGGCACAACGGTTTCACGTACGAGTGTCAACTTTGTAGTCATAAGTTCAGaaaACCCACATCATATTTGTCGCATATGCGCAAAAGACATCCTACTGAGCATGTATGCAACATATGCGGAGAAAGTTTTGTAGGACAGCATGGTTTACAAATGCATAAAAGTAAAACGCATAGGAATGATAGGCTGAATGAGTCCTCAGAAGAACCTTCTATGGACAGATTTTGTAAAGACTgcgatatattattttacaaccgAGATGCATGGAAAAGGCATATATTGTGTTCTATAAAACATACGCTTAAGAGTGAAACCAGCACAGAGTGTGGTATATGTGGTTGGAGCGGCACTAACACAGCGCTAACCAATCATATGAGAGAACATTCTAGAAGTTTAAAGAAAAGGCCTAGAACCACCCATGTACCTGAGAGATCACACTGTAGATGTCCACAGTGTGGTGTAAATTTCTTGAGTCGCGGCAAACTGCAAGCtcatataaatagaatacatttgggaatgaaatataataaaaatatagtttgtgaAGTTTGTGGGAAACATTGTAcgTCTAACGCCACACTCAAATACCACCAGCGCACCCACACAGGGGAACGCCCATACTCTTGTTCGACTTGTGTCAAGCAGTTTTCAGACAGCAATCAGTTACGTATACACATACGAACTCACACCGGCGAGAAGCCATATATATGTGCGGCGTGCGGGAAGAGGTTCACTCAGAAACCTGCGCTTAATAGACATTATAGAGTCCACACTGGAGATAAGCCATATTCCTGTACATACTGCACCCGAACATTCAGTCAGTCGAACTCGCTGAAATTACACGTTCGCACCGTACATTTGAAATTACCAGTCAACAGTCGGAAACGAAGTAAAAAGATTACAGATAATACACTTAAAAATGGCGAttga
Protein Sequence: MAKARCRICFVENVRMHPILNTYLQEIYERLSEMPLKSKNDRPILLCYICYKRLQHCYRLHLNCIRSENLLAQVPEKDLIPLPNHLGKSQISHTTLSESSNDNVKLELEDYDDVEVKQEDKEDTEGPCYDLDNSRTSDSDDNIPLKVIKNESERKLRRKKRNRVRKRDDDMKKTFQIDAHKIILSREEQLSNLVARATSQNYTKSPYRCDLCYKGFVDLKAYENHKMKHDESSGPYACDICHMRYRTAQHLRTHVITAHSRLFKCNKCEHTSHTANQARVHEKWHNGFTYECQLCSHKFRKPTSYLSHMRKRHPTEHVCNICGESFVGQHGLQMHKSKTHRNDRLNESSEEPSMDRFCKDCDILFYNRDAWKRHILCSIKHTLKSETSTECGICGWSGTNTALTNHMREHSRSLKKRPRTTHVPERSHCRCPQCGVNFLSRGKLQAHINRIHLGMKYNKNIVCEVCGKHCTSNATLKYHQRTHTGERPYSCSTCVKQFSDSNQLRIHIRTHTGEKPYICAACGKRFTQKPALNRHYRVHTGDKPYSCTYCTRTFSQSNSLKLHVRTVHLKLPVNSRKRSKKITDNTLKNGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -